THYMUS DETAIL SUMMARY
Mesothelial cellsMedullary thymic epithelial cellsVascular endothelial cellsLymphatic endothelial cellsPericytesVascular smooth muscle cellsFibroblastsThymic myoid cellsNeutrophil progenitorsNeutrophilsMonocytesMacrophagesT-cellsThymocytesInnate lymphoid cellsB-cellsPlasma cellsNK-cells0246810nCPMSpecialized epithelial cellsEndothelial and mural cellsMesenchymal cellsBlood and immune cells
SINGLE CELL TYPE - THYMUSi
Cell type color
Cluster color
Colored according to cell type group
Read count filter: 0
Cluster filter:
 
Cluster Cell type Expression (nCPM)
0 10
c-0 T-cells (CD4+)
c-1 Fibroblasts
c-2 Memory B-cells
c-3 Neutrophils
c-4 Regulatory T-cells (CD4+)
c-5 Naive T-cells (CD4+)
c-6 Capillary endothelial cells
c-7 Naive B-cells
c-8 Cytotoxic T-cells (CD8+)
c-9 Venous endothelial cells
c-10 Monocytes
c-11 Fibroblasts
c-12 T-cells (CD4+)
c-13 Vascular smooth muscle cell
c-14 Arterial endothelial cells
c-15 Macrophages
c-16 Pericytes
c-17 Late myelocytes
c-18 Plasma cells
c-19 T-cells (CD8+)
c-20 NK-cells
c-21 Fibroblasts
c-22 T-cells (CD8+)
c-23 Lymphatic endothelial cells
c-24 ILCs
c-25 Thymic myoid cells
c-26 Thymocytes
c-27 Mesothelial cells
c-28 Mast cells
c-29 MTEC
c-30 Mast cells
SINGLE CELL TYPE TABULA SAPIENS - THYMUSi
Cell type color
Cluster color
Colored according to cell type group
Read count filter: 0
 
Cluster Cell type Expression (nCPM)
0 130
c-0 Cd4-positive helper t cell
c-1 Naive regulatory t cell
c-2 T follicular helper cell
c-3 Cd8-positive, alpha-beta cy...
c-4 Dn4 thymocyte
c-5 B cell
c-6 Medullary thymic epithelial...
c-7 Fibroblast
c-8 Macrophage
c-9 Vascular associated smooth ...
c-10 Plasma cell
c-11 Vein endothelial cell
c-12 Capillary endothelial cell
c-13 Endothelial cell of artery
c-14 Nk cell
c-15 Erythrocyte
c-16 Monocyte
c-17 Endothelial cell of lymphat...
c-18 Myeloid dendritic cell
c-19 Dn3 thymocyte
c-20 Dn1 thymic pro-t cell
c-21 Innate lymphoid cell
c-22 Cd8-positive, alpha-beta t ...
c-23 Memory b cell
c-24 Naive b cell
c-25 Mesothelial cell
c-26 Mature nk t cell
c-27 Fast muscle cell
c-28 Dendritic cell
c-29 Immature natural killer cel
c-30 Thymocyte
c-31 Mast cell
CELL TYPE MARKERSi
SINGLE CELL TYPE
TABULA SAPIENS
Max-norm
Z-score
Fraction of highest expression (≥1 nTPM)
GET1ITLN1MSLNUPK3BEPCAMKRT14KRT17PECAM1VWFACKR1POSTNHEY1HEY2SEMA3GCA4RGCCLYVE1PROX1PDGFRBRGS5STEAP4ACTA2CNN1MYH11COL1A1DCNFBLN2PDGFRADESMYL1MYL11MYOD1CPA3TPSAB1TPSB2CAMPCEACAM8LTFCSF3RCXCR2FCGR3BFCN1IL1BS100A8S100A9VCANCD14C1QBC1QCHLA-DRAHLA-DRB1F13A1CD3DCD3GCD4CD8AIL7RCTLA4FOXP3IL2RADNTTFLT3KITGATA3HPGDSIL9RNCR2RORCBANK1CD19MS4A1CD27TNFRSF13BDERL3IGHA1GZMANKG7PRF1T-cells c-0Fibroblasts c-1B-cells c-2Neutrophils c-3T-cells c-4T-cells c-5Vascular endothelial cells c-6B-cells c-7T-cells c-8Vascular endothelial cells c-9Monocytes c-10Fibroblasts c-11T-cells c-12Vascular smooth muscle cells c-13Vascular endothelial cells c-14Macrophages c-15Pericytes c-16Neutrophil progenitors c-17Plasma cells c-18T-cells c-19NK-cells c-20Fibroblasts c-21T-cells c-22Lymphatic endothelial cells c-23Innate lymphoid cells c-24Thymic myoid cells c-25Thymocytes c-26Mesothelial cells c-27Mast cells c-28Medullary thymic epithelial cells c-29Mast cells c-30Current geneMesothelial cellsMedullary thymic epithelial cellsVascular endothelial cellsLymphatic endothelial cellsPericytesVascular smooth muscle cellsFibroblastsThymic myoid cellsMast cellsNeutrophil progenitorsNeutrophilsMonocytesMacrophagesT-cellsThymocytesInnate lymphoid cellsB-cellsPlasma cellsNK-cells00.250.50.751
 

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