LYMPH NODE DETAIL SUMMARY
Vascular endothelial cellsLymphatic endothelial cellsFibroblastsMast cellsNeutrophilsMonocytesMacrophagesT-cellsInnate lymphoid cellsB-cellsPlasma cellsCDCNK-cells0246810nCPMEndothelial and mural cellsMesenchymal cellsBlood and immune cells
SINGLE CELL TYPE - LYMPH NODEi
Cell type color
Cluster color
Colored according to cell type group
Read count filter: 0
Cluster filter:
 
Cluster Cell type Expression (nCPM)
0 10
c-0 Naive T-cells (CD4+)
c-1 Memory B-cells
c-2 Memory B-cells
c-3 Effector T-cells (CD8+)
c-4 Memory B-cells
c-5 Naive T-cells (CD4+)
c-6 Naive B-cells
c-7 Regulatory T-cells
c-8 Naive T-cells (CD4+)
c-9 Naive T-cells (CD8+)
c-10 Memory B-cells
c-11 Memory B-cells
c-12 Plasma cells (cycling)
c-13 Plasma cells
c-14 Innate lymphoid cells
c-15 Effector T-cells (CD8+)
c-16 Monocytes
c-17 Macrophages
c-18 NKT-cells
c-19 Neutrophils
c-20 NK-cells
c-21 Mast cells
c-22 NK-cells
c-23 Conventional dendritic cell
c-24 Macrophages
c-25 Mixed NKT-cells
c-26 Fibroblasts
c-27 Lymphatic endothelial cells
c-28 Venous endothelial cells
c-29 Conventional dendritic cell
c-30 Lymphoid DC
c-31 Arterial endothelial cells
c-32 Plasmacytoid DCs
SINGLE CELL TYPE TABULA SAPIENS - LYMPH NODEi
Cell type color
Cluster color
Colored according to cell type group
Read count filter: 0
 
Cluster Cell type Expression (nCPM)
0 180
c-0 B cell
c-1 Cd8-positive alpha-beta t c
c-2 T cell
c-3 Type i nk t cell
c-4 Cd4-positive alpha-beta t c
c-5 Innate lymphoid cell
c-6 Regulatory t cell
c-7 Plasma cell
c-8 Neutrophil
c-9 Classical monocyte
c-10 Nk cell
c-11 Macrophage
c-12 Endothelial cell
c-13 Cd141-positive myeloid dend...
c-14 Cd1c-positive myeloid dendr...
c-15 Intermediate monocyte
c-16 Hematopoietic stem cell
c-17 Non-classical monocyte
c-18 Mast cell
c-19 Plasmacytoid dendritic cell
c-20 Stromal cell
c-21 Erythrocyte
c-22 Mature conventional dendrit...
c-23 Naive b cell
c-24 Memory b cell
c-25 Naive thymus-derived cd4-po...
c-26 Cd4-positive, alpha-beta me...
c-27 Cd8-positive, alpha-beta me...
c-28 Mature nk t cell
CELL TYPE MARKERSi
SINGLE CELL TYPE
TABULA SAPIENS
Max-norm
Z-score
Fraction of highest expression (≥1 nTPM)
GET1PECAM1VWFACKR1POSTNHEY1HEY2SEMA3GCA4RGCCLYVE1PROX1COL1A1DCNFBLN2PDGFRACPA3TPSAB1TPSB2CEACAM8CSF3RCXCR2FCGR3BFCN1IL1BS100A8S100A9VCANCD14FCGR3AC1QBC1QCHLA-DRAHLA-DRB1F13A1CD3DCD3GCD4CD8AIL7RCTLA4FOXP3IL2RAGATA3HPGDSIL9RNCR2RORCBANK1CD19MS4A1CD27TNFRSF13BDERL3IGHA1CLEC9AIRF8CD1CCLEC10ACCR7LAMP3CLEC4CIL3RAIRF7GZMANKG7PRF1T-cells c-0B-cells c-1B-cells c-2T-cells c-3B-cells c-4T-cells c-5B-cells c-6T-cells c-7T-cells c-8T-cells c-9B-cells c-10B-cells c-11Plasma cells c-12Plasma cells c-13Innate lymphoid cells c-14T-cells c-15Monocytes c-16Macrophages c-17T-cells c-18Neutrophils c-19NK-cells c-20Mast cells c-21NK-cells c-22CDC c-23Macrophages c-24T-cells c-25Fibroblasts c-26Lymphatic endothelial cells c-27Vascular endothelial cells c-28CDC c-29CDC c-30Vascular endothelial cells c-31PDCs c-32Current geneVascular endothelial cellsLymphatic endothelial cellsFibroblastsMast cellsNeutrophilsMonocytesMacrophagesT-cellsInnate lymphoid cellsB-cellsPlasma cellsCDCPDCsNK-cells00.250.50.751
 

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