We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
VPS37B
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

 
Field
All
Term
Gene name
Class
Blood group antigen proteins
Subclass
 
Category
 
Keyword
Chromosome
External id
Tissue
 
Cell type
 
Expression
Antibody panel
 
Tissue
 
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
 
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Yes
Data type
Column
Gene


                              • SPECIFICITY
                              • DISTRIBUTION
                              • EXPRESSION
                              • SPECIFICITY
                              • DISTRIBUTION
                              • EXPRESSION
                              • SPECIFICITY
                              • DISTRIBUTION
                              • EXPRESSION
                              • SPECIFICITY
                              • DISTRIBUTION
                              • EXPRESSION
                                  • SPECIFICITY
                                  • DISTRIBUTION
                                  • EXPRESSION
                                  • SPECIFICITY
                                  • DISTRIBUTION
                                  • EXPRESSION
                                  • SPECIFICITY
                                  • DISTRIBUTION
                                  • EXPRESSION
                                  • SPECIFICITY
                                  • DISTRIBUTION
                                  • EXPRESSION
                                  • SPECIFICITY
                                  • DISTRIBUTION
                                  • EXPRESSION
                                  • RELIABILITY
                                  • SUBCELLULAR VARIATION
                                  • MULTILOCALIZATION
                                  • OTHER
                                  • SPECIFICITY
                                  • DISTRIBUTION
                                  • EXPRESSION
                                  • SPECIFICITY
                                  • DISTRIBUTION
                                  • EXPRESSION
                                  • Check all
                                  • Uncheck all
                                          • SUMMARY

                                          • TISSUE

                                          • BRAIN

                                          • SINGLE CELL

                                          • SUBCELL

                                          • CANCER

                                          • BLOOD

                                          • CELL LINE

                                          • STRUCTURE

                                          • INTERACTION

                                          • VPS37B
                                          TISSUE PRIMARY DATA FALLOPIAN TUBE Show tissue menu
                                          ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
                                          DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
                                          NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
                                          SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
                                          ANTIBODIES
                                          AND
                                          VALIDATION
                                          Dictionary
                                          Fallopian tube
                                          Tissue proteome
                                          Fallopian tube
                                          Tissue methods
                                          FALLOPIAN TUBE - Expression summary
                                          Protein expression
                                          Fallopian tubei

                                          On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

                                          h
                                          m
                                          l
                                          n
                                          Glandular cells: Medium
                                          RNA expressioni

                                          A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

                                          Scroll down to view mRNA expression data in more detail.

                                          Consensus:14.6 nTPM
                                          HPA:7.3 nTPM
                                          GTEx:14.6 nTPM
                                          FALLOPIAN TUBE - SINGLE CELL RNA EXPRESSION
                                          Explore single cell type data
                                          Fallopian tube ciliated cellsFallopian secretory cellsSmooth muscle cellsVascular endothelial cellsLymphatic endothelial cellsPericytesVascular smooth muscle cellsFibroblastsMast cellsMonocytesMacrophagesT-cellsInnate lymphoid cellsPlasma cellsNK-cells0100200300400500nCPM

                                          FALLOPIAN TUBE - Antibody stainingi

                                          Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

                                          Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

                                          Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

                                          Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

                                          Antibody HPA038217Antibody HPA038218
                                          Glandular cells MediumMedium





                                          FALLOPIAN TUBE - HPA RNA-seqi

                                          The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

                                          Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

                                          Average nTPMi

                                          Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

                                          7.3
                                          overview
                                          Female, age 66
                                          Fallopian tube sample 136
                                          nTPM: 7.5
                                          Cell types%
                                          Glandular cells:
                                          10

                                          Fibroblasts:
                                          40

                                          Smooth muscle cells:
                                          40

                                          Other cell types:
                                          10

                                          overview
                                          Female, age 65
                                          Fallopian tube sample 304
                                          nTPM: 6.5
                                          Cell types%
                                          Glandular cells:
                                          10

                                          Fibroblasts:
                                          60

                                          Smooth muscle cells:
                                          20

                                          Other cell types:
                                          10

                                          overview
                                          Female, age 41
                                          Fallopian tube sample 305
                                          nTPM: 6.3
                                          Cell types%
                                          Glandular cells:
                                          50

                                          Fibroblasts:
                                          40

                                          Smooth muscle cells:
                                          5

                                          Other cell types:
                                          5

                                          overview
                                          Female, age 44
                                          Fallopian tube sample 306
                                          nTPM: 8.2
                                          Cell types%
                                          Glandular cells:
                                          5

                                          Fibroblasts:
                                          60

                                          Smooth muscle cells:
                                          30

                                          Other cell types:
                                          5

                                          overview
                                          Female, age 80
                                          Fallopian tube sample 307
                                          nTPM: 8
                                          Cell types%
                                          Glandular cells:
                                          5

                                          Fibroblasts:
                                          55

                                          Smooth muscle cells:
                                          30

                                          Other cell types:
                                          10


                                          FALLOPIAN TUBE - GTEx RNA-seqi

                                          RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

                                          Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

                                          Max subtype nTPMi

                                          Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

                                          14.6
                                          GTEx sample id Sample description nTPM
                                          10.912.915.99.120.4051015202530
                                          10.912.915.99.120.4051015202530
                                          Fallopian Tube
                                          Average nTPM: 14.6
                                          Samples: 29

                                          Max nTPM: 33.5
                                          Min nTPM: 9.1
                                          Std nTPM: 5.2
                                          Median nTPM: 12.9
                                          GTEX-RU1J-0926-SM-GNTAD 20-29 years, female 33.5
                                          GTEX-SE5C-0926-SM-4BRUF 40-49 years, female 27.3
                                          GTEX-S341-0826-SM-4AD73 40-49 years, female 20.4
                                          GTEX-R55G-1426-SM-HL9T8 40-49 years, female 19.1
                                          GTEX-PWCY-1226-SM-HL9TV 20-29 years, female 18.8
                                          GTEX-OHPK-2326-SM-3MJH2 50-59 years, female 16.3
                                          GTEX-T6MO-1026-SM-4DM72 40-49 years, female 16.0
                                          GTEX-QCQG-0926-SM-H6Q7J 50-59 years, female 15.9
                                          GTEX-P78B-2026-SM-HL9TU 40-49 years, female 15.6
                                          GTEX-U3ZN-1126-SM-4DXUL 30-39 years, female 15.4
                                          GTEX-T5JW-0326-SM-4DM6J 20-29 years, female 15.0
                                          GTEX-T2IS-2126-SM-GRR2H 20-29 years, female 14.7
                                          GTEX-RU72-2326-SM-F21KS 50-59 years, female 14.1
                                          GTEX-R45C-2326-SM-GRR27 60-69 years, female 13.5
                                          GTEX-TML8-1026-SM-GPRWP 40-49 years, female 12.9
                                          GTEX-S7SF-0726-SM-GQ1CN 20-29 years, female 12.8
                                          GTEX-PLZ4-2326-SM-EYYV5 50-59 years, female 12.7
                                          GTEX-RTLS-2226-SM-GPRWG 60-69 years, female 12.2
                                          GTEX-RWS6-1226-SM-HL9T9 60-69 years, female 12.1
                                          GTEX-TMMY-1826-SM-HL9U6 40-49 years, female 11.7
                                          GTEX-P4PP-3126-SM-HL9TB 30-39 years, female 11.2
                                          GTEX-QVJO-3026-SM-HAUZR 60-69 years, female 10.9
                                          GTEX-OHPL-2326-SM-HL9TT 60-69 years, female 10.8
                                          GTEX-SN8G-2326-SM-HAUZS 50-59 years, female 10.4
                                          GTEX-PX3G-2326-SM-GNTBV 20-29 years, female 10.3
                                          GTEX-TSE9-2326-SM-EZ6ME 60-69 years, female 10.2
                                          GTEX-S32W-1326-SM-4AD5Q 50-59 years, female 10.1
                                          GTEX-POMQ-1326-SM-HAUZO 20-29 years, female 9.4
                                          GTEX-QDT8-2326-SM-HL9UC 30-39 years, female 9.1
                                          Show allShow less

                                          Contact

                                          • NEWS ARTICLES
                                          • PRESS ROOM

                                          The Project

                                          • INTRODUCTION
                                          • ORGANIZATION
                                          • PUBLICATIONS

                                          The Human Protein Atlas

                                          • DOWNLOADABLE DATA
                                          • LICENCE & CITATION
                                          • HELP & FAQ
                                          The Human Protein Atlas project is funded
                                          by the Knut & Alice Wallenberg Foundation.

                                          contact@proteinatlas.org