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                                          • DDX10
                                          TISSUE PRIMARY DATA VAGINA Show tissue menu
                                          ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
                                          DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
                                          NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
                                          SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
                                          ANTIBODIES
                                          AND
                                          VALIDATION
                                          Dictionary
                                          Vagina
                                          Tissue proteome
                                          Vagina
                                          Tissue methods
                                          VAGINA - Expression summary
                                          Protein expression
                                          Vaginai

                                          On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

                                          h
                                          m
                                          l
                                          n
                                          Squamous epithelial cells: Not detected
                                          RNA expressioni

                                          A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

                                          Scroll down to view mRNA expression data in more detail.

                                          Consensus:5.8 nTPM
                                          GTEx:5.8 nTPM
                                          FANTOM5:43.3 Scaled Tags Per Million

                                          VAGINA - Antibody stainingi

                                          Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

                                          Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

                                          Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

                                          Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

                                          Antibody HPA004691
                                          Squamous epithelial cells Not detected


                                          VAGINA - GTEx RNA-seqi

                                          RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

                                          Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

                                          Max subtype nTPMi

                                          Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

                                          5.8
                                          GTEx sample id Sample description nTPM
                                          4.65.76.81.510.0012345678910111213
                                          4.65.76.81.510.0012345678910111213
                                          Vagina
                                          Average nTPM: 5.8
                                          Samples: 170

                                          Max nTPM: 13.1
                                          Min nTPM: 1.5
                                          Std nTPM: 1.8
                                          Median nTPM: 5.7
                                          GTEX-14JG6-0726-SM-69LQH 30-39 years, female 13.1
                                          GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 10.5
                                          GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 10.5
                                          GTEX-14PKU-1326-SM-6871B 40-49 years, female 10.4
                                          GTEX-1CAMS-2326-SM-793CR 40-49 years, female 10.4
                                          GTEX-O5YV-2226-SM-HM8V7 60-69 years, female 10.0
                                          GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 9.7
                                          GTEX-16MT8-2426-SM-GQ1DK 60-69 years, female 9.0
                                          GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 9.0
                                          GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 8.8
                                          GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 8.8
                                          GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 8.7
                                          GTEX-1LGRB-2126-SM-COH48 50-59 years, female 8.5
                                          GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 8.5
                                          GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 8.2
                                          GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 7.9
                                          GTEX-RWS6-1726-SM-47JXP 60-69 years, female 7.8
                                          GTEX-S341-1226-SM-4AD5S 40-49 years, female 7.8
                                          GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 7.8
                                          GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 7.7
                                          GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 7.7
                                          GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 7.6
                                          GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 7.6
                                          GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 7.6
                                          GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 7.6
                                          GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 7.4
                                          GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 7.4
                                          GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 7.4
                                          GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 7.3
                                          GTEX-OXRK-2026-SM-GOQY5 50-59 years, female 7.3
                                          GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 7.3
                                          GTEX-14PJM-2926-SM-69LOE 50-59 years, female 7.2
                                          GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 7.2
                                          GTEX-Q734-1426-SM-DTXFX 40-49 years, female 7.2
                                          GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 7.1
                                          GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 7.1
                                          GTEX-ZXES-0626-SM-5E45P 30-39 years, female 7.1
                                          GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 6.9
                                          GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 6.9
                                          GTEX-14H4A-2426-SM-664OQ 40-49 years, female 6.9
                                          GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 6.9
                                          GTEX-RU1J-1426-SM-46MUV 20-29 years, female 6.9
                                          GTEX-13FTY-2026-SM-GIN9K 40-49 years, female 6.8
                                          GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 6.8
                                          GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 6.8
                                          GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 6.8
                                          GTEX-147F3-1526-SM-5MR7L 50-59 years, female 6.7
                                          GTEX-14PJ6-1626-SM-6872D 60-69 years, female 6.7
                                          GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 6.7
                                          GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 6.7
                                          GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 6.7
                                          GTEX-PWCY-1726-SM-48TD3 20-29 years, female 6.7
                                          GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 6.7
                                          GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 6.7
                                          GTEX-1399S-2326-SM-5K7YV 30-39 years, female 6.5
                                          GTEX-S4UY-1026-SM-4AD53 40-49 years, female 6.5
                                          GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 6.4
                                          GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 6.4
                                          GTEX-TML8-1126-SM-4DXSS 40-49 years, female 6.4
                                          GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 6.4
                                          GTEX-146FR-2426-SM-5NQAU 60-69 years, female 6.3
                                          GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 6.3
                                          GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 6.3
                                          GTEX-1MA7W-1226-SM-HL9SB 20-29 years, female 6.3
                                          GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 6.3
                                          GTEX-11P81-2126-SM-5HL6N 30-39 years, female 6.2
                                          GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 6.2
                                          GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 6.2
                                          GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 6.2
                                          GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 6.1
                                          GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 6.1
                                          GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 6.1
                                          GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 6.0
                                          GTEX-11I78-2026-SM-5987C 50-59 years, female 5.9
                                          GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 5.9
                                          GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 5.9
                                          GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 5.9
                                          GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 5.9
                                          GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 5.8
                                          GTEX-1C475-0526-SM-793AC 40-49 years, female 5.8
                                          GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 5.8
                                          GTEX-RTLS-2126-SM-GPRWH 60-69 years, female 5.8
                                          GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 5.7
                                          GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 5.7
                                          GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 5.7
                                          GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 5.7
                                          GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 5.6
                                          GTEX-ZVZQ-2726-SM-GPRY1 60-69 years, female 5.6
                                          GTEX-11DXX-1726-SM-5H11T 60-69 years, female 5.5
                                          GTEX-1399U-1526-SM-5J2N7 50-59 years, female 5.5
                                          GTEX-139D8-2626-SM-GJ3QN 30-39 years, female 5.5
                                          GTEX-13N11-1526-SM-5L3FL 50-59 years, female 5.5
                                          GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 5.5
                                          GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 5.5
                                          GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 5.5
                                          GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 5.4
                                          GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 5.4
                                          GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 5.4
                                          GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 5.4
                                          GTEX-16NGA-1626-SM-72D6M 40-49 years, female 5.4
                                          GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 5.4
                                          GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 5.4
                                          GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 5.4
                                          GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 5.4
                                          GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 5.3
                                          GTEX-15DYW-2926-SM-6PANA 60-69 years, female 5.2
                                          GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 5.2
                                          GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 5.2
                                          GTEX-WI4N-2626-SM-GPI8F 40-49 years, female 5.2
                                          GTEX-145LS-2526-SM-5TDC9 60-69 years, female 5.1
                                          GTEX-PWN1-2526-SM-48TDS 40-49 years, female 5.1
                                          GTEX-QCQG-1226-SM-48U23 50-59 years, female 5.1
                                          GTEX-RNOR-2526-SM-F21KT 50-59 years, female 5.0
                                          GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 5.0
                                          GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 5.0
                                          GTEX-XYKS-2826-SM-H7OG8 60-69 years, female 5.0
                                          GTEX-131YS-2426-SM-5J2OD 60-69 years, female 4.9
                                          GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 4.9
                                          GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 4.9
                                          GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 4.8
                                          GTEX-16NPV-2526-SM-6M483 50-59 years, female 4.8
                                          GTEX-183WM-2126-SM-7LG4I 70-79 years, female 4.8
                                          GTEX-PX3G-2526-SM-48TZV 20-29 years, female 4.7
                                          GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 4.7
                                          GTEX-132AR-1626-SM-5EGHP 50-59 years, female 4.6
                                          GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 4.6
                                          GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 4.6
                                          GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 4.6
                                          GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 4.6
                                          GTEX-13D11-1326-SM-5IJFY 50-59 years, female 4.5
                                          GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 4.5
                                          GTEX-S4P3-1126-SM-4AD52 50-59 years, female 4.5
                                          GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 4.5
                                          GTEX-1117F-2526-SM-5GZY6 60-69 years, female 4.4
                                          GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 4.4
                                          GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 4.4
                                          GTEX-QDT8-2526-SM-48TYX 30-39 years, female 4.4
                                          GTEX-W5X1-2226-SM-GRR1G 40-49 years, female 4.4
                                          GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 4.3
                                          GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 4.2
                                          GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 4.2
                                          GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 4.1
                                          GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 4.1
                                          GTEX-145ME-1426-SM-5RQJS 40-49 years, female 4.0
                                          GTEX-1LKK1-1826-SM-GNIPA 50-59 years, female 4.0
                                          GTEX-P4PP-2526-SM-3P61P 30-39 years, female 4.0
                                          GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 4.0
                                          GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 3.9
                                          GTEX-113JC-1926-SM-5N9GE 50-59 years, female 3.8
                                          GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 3.7
                                          GTEX-R45C-2226-SM-GQ1EF 60-69 years, female 3.7
                                          GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 3.7
                                          GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 3.7
                                          GTEX-WYBS-2826-SM-GOQYI 60-69 years, female 3.6
                                          GTEX-ZAJG-2926-SM-5HL8P 50-59 years, female 3.6
                                          GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 3.5
                                          GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 3.5
                                          GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 3.4
                                          GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 3.4
                                          GTEX-131XG-2126-SM-5DUXG 50-59 years, female 3.3
                                          GTEX-T2IS-1926-SM-4DM74 20-29 years, female 3.1
                                          GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 3.0
                                          GTEX-14A5I-2726-SM-5MR84 50-59 years, female 2.9
                                          GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 2.8
                                          GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 2.6
                                          GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 2.4
                                          GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 2.4
                                          GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 2.3
                                          GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 2.1
                                          GTEX-11TTK-2726-SM-5GU58 60-69 years, female 1.5
                                          Show allShow less

                                          VAGINA - FANTOM5 CAGEi

                                          RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

                                          Max subtype Scaled Tags Per Millioni

                                          Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

                                          43.3
                                          FANTOM5 sample id Sample description Scaled Tags Per Million
                                          Vagina
                                          Scaled Tags Per Million: 43.3
                                          FF:10204-103F6 68 years, female 43.3

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