COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Low
Glandular cells: Low
Peripheral nerve/ganglion: Low
RNA expressioni
Consensus:5.6 nTPM
HPA:5.4 nTPM
GTEx:5.6 nTPM
FANTOM5:18.8 Scaled Tags Per Million
COLON - SINGLE CELL RNA EXPRESSION
Neuroendocrine cellsTuft cellsColonocytesGoblet cellsT-cellsNK-cellsEnteric transient amplifying cellsEnteric stem cells010203040506070nCPM

COLON - Antibody stainingi
Antibody HPA004691
Endothelial cells Low
Glandular cells Low
Peripheral nerve/ganglion Low


COLON - HPA RNA-seqi
Average nTPMi 5.4
overview
Male, age 54
Colon sample 67
nTPM: 3.5
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57
Colon sample 68
nTPM: 4.7
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80
Colon sample 69
nTPM: 4.5
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68
Colon sample 70
nTPM: 5.1
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68
Colon sample 76
nTPM: 5.7
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61
Colon sample 299
nTPM: 6.3
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80
Colon sample 300
nTPM: 7.8
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78
Colon sample 368
nTPM: 5.6
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84
Colon sample 381
nTPM: 4.4
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80
Colon sample 384
nTPM: 8.7
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78
Colon sample 389
nTPM: 5.3
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69
Colon sample 391
nTPM: 5.2
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72
Colon sample 403
nTPM: 3.7
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Max subtype nTPMi 5.6
GTEx sample id Sample description nTPM
4.45.56.71.89.602468101214
Colon - Sigmoid
Average nTPM: 5.6
Samples: 419

Max nTPM: 14.2
Min nTPM: 0.8
Std nTPM: 1.7
Median nTPM: 5.5
GTEX-1K9T9-2926-SM-E9TKD 50-59 years, female 14.2
GTEX-ZYFD-2226-SM-5E43P 50-59 years, male 13.9
GTEX-1F5PL-1926-SM-7MXTP 40-49 years, female 11.1
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 10.6
GTEX-1L5NE-1926-SM-D3L9R 50-59 years, male 10.5
GTEX-15ER7-2826-SM-6PAN2 20-29 years, female 10.2
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 9.6
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 9.6
GTEX-13CF3-1326-SM-5LZXZ 60-69 years, female 9.6
GTEX-14E1K-1626-SM-664MO 50-59 years, male 9.6
GTEX-14E6E-1726-SM-5S2R6 30-39 years, male 9.3
Show allShow less
3.84.55.41.87.80123456789101112
Colon - Transverse
Average nTPM: 4.7
Samples: 479

Max nTPM: 12.7
Min nTPM: 0.6
Std nTPM: 1.3
Median nTPM: 4.5
GTEX-1N2EF-1926-SM-DTX8M 60-69 years, male 12.7
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 10.3
GTEX-ZTTD-2526-SM-GOR17 50-59 years, male 9.9
GTEX-U8XE-2426-SM-GPRWM 30-39 years, male 9.4
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 9.2
GTEX-1AX8Z-2726-SM-73KUC 60-69 years, male 9.2
GTEX-144GM-1226-SM-5LU52 20-29 years, male 9.1
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 8.4
GTEX-1MUQO-2626-SM-EWRO3 60-69 years, male 8.2
GTEX-13CF3-1426-SM-5K7YY 60-69 years, female 8.1
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 8.1
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COLON - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 18.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 18.8
FF:10014-101C5 62,83,84 years, mixed 18.8

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