AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:3.2 nTPM
HPA Brain:3.2 nTPM
GTEx:3.2 nTPM
FANTOM5:36.9 Scaled Tags Per Million
Mouse:11.1 nTPM
Allen mouse:0.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Brain excitatory neuronsBrain inhibitory neuronsOther brain neuronsAstrocytesBergmann gliaOligodendrocyte progenitor cellsOligodendrocytesMicrogliaEpendymal cellsChoroid plexus epithelial cellsVascular endothelial cellsPericytesVascular smooth muscle cellsFibroblastsMonocytesMacrophagesT-cellsB-cellsNK-cells050100150200nCPM

AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi 3.2
Sample id Sample description nTPM
Amygdala
nTPM: 3.1
2814 Male, age 76, right hemisphere 5.4
1987 Female, age 91, left hemisphere 2.9
2695 Female, age 67, right hemisphere 2.5
2517 Female, age 94, left hemisphere 2.3
2514 Male, age 75, right hemisphere 2.2
Basal amygdala
nTPM: 2.8
1955 Male, age 76, both hemispheres 3.1
2685 Female, age 94, left hemisphere 3.0
2110 Male, age 80, left hemisphere 2.8
2827 Female, age 67, right hemisphere 2.7
2243 Female, age 91, right hemisphere 2.6
2609 Male, age 75, right hemisphere 2.5
Central amygdala
nTPM: 2.8
1905 Male, age 76, both hemispheres 3.3
2701 Female, age 91, right hemisphere 3.2
2239 Male, age 80, left hemisphere 2.7
2515 Male, age 75, right hemisphere 2.7
2826 Female, age 94, left hemisphere 2.2
Corticomedial amygdala
nTPM: 3.2
2535 Female, age 67, right hemisphere 3.7
2240 Male, age 76, both hemispheres 3.5
2428 Male, age 75, right hemisphere 3.1
2829 Male, age 80, left hemisphere 3.1
2242 Female, age 91, right hemisphere 3.0
2429 Female, age 94, left hemisphere 3.0
Lateral amygdala
nTPM: 3.0
2255 Female, age 91, right hemisphere 3.5
2830 Female, age 67, right hemisphere 3.2
1883 Male, age 76, both hemispheres 3.1
2256 Male, age 80, left hemisphere 3.0
2534 Female, age 94, left hemisphere 2.6
2516 Male, age 75, right hemisphere 2.4

AMYGDALA - GTEx RNA-seqi
Max subtype nTPMi 3.2
GTEx sample id Sample description nTPM
2.53.03.71.25.50.00.51.01.52.02.53.03.54.04.55.05.56.06.5
Brain - Amygdala
Average nTPM: 3.2
Samples: 181

Max nTPM: 6.9
Min nTPM: 0.5
Std nTPM: 1.1
Median nTPM: 3.0
GTEX-1RQEC-0011-R4b-SM-F342C 60-69 years, male 6.9
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 6.7
GTEX-14BMV-0011-R4a-SM-H6Q7P 50-59 years, male 6.6
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 6.3
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 6.2
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 6.1
GTEX-1N2EF-0011-R4a-SM-F341F 60-69 years, male 5.6
GTEX-111FC-0011-R4a-SM-GIN8K 60-69 years, male 5.5
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 5.4
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 5.3
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 5.3
Show allShow less

AMYGDALA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 36.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 36.9
FF:10151-102I7 76 years, female 36.9

AMYGDALA - Mouse RNA-seqi
Max subtype nTPMi 11.1
Mouse sample Sample description nTPM
10.810.911.310.611.901234567891011
 		Amygdala
nTPM: 11.1
Samples: 4

Max nTPM: 11.9
Min nTPM: 10.6
Sample A Male 11.9
Sample B Male 10.6
Sample C Female 10.8
Sample D Female 11.1

AMYGDALA - Allen Mouse ISHi
Max subtype Expression energyi 0.5
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 0.5
69626717 Antisense, RP_050428_01_B12, Mouse strain C57BL/6J (56 days, male) 0.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

contact@proteinatlas.org