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  • SUMMARY

  • TISSUE

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  • PRKCD
TISSUE PRIMARY DATA PUTAMEN Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Tissue methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:23.3 nTPM
GTEx:8.9 nTPM
FANTOM5:24.5 Scaled Tags Per Million
Pig:15.4 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

23.3
Sample id Sample description nTPM
Putamen
nTPM: 23.3
2466 Female, age 79, unknown 30.2
1829 Male, age 74, unknown 28.9
1937 Female, age 91, right hemisphere 25.3
2489 Female, age 72, unknown 21.8
1838 Male, age 80, right hemisphere 20.1
2482 Female, age 94, left hemisphere 19.7
2647 Male, age 75, left hemisphere 17.2

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

8.9
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 8.9
Samples: 254

Max nTPM: 55.3
Min nTPM: 1.3
Std nTPM: 6.8
Median nTPM: 6.5
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 55.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 30.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 29.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 28.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 26.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 26.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 25.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 23.5
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 23.4
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 22.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 22.9
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 22.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 21.7
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 21.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 21.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 20.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 20.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 20.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 19.9
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 19.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 19.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 18.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 18.7
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 18.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 18.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 18.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 18.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 17.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 17.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 17.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 16.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 16.5
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 16.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 16.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 16.0
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 16.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 15.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 15.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 15.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 15.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 15.5
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 15.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 15.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 15.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 15.1
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 15.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 14.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 14.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 14.7
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 14.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 14.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 13.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 13.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 13.4
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 13.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 13.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 13.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 13.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 12.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 12.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 12.9
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 12.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 12.4
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 12.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 12.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 12.1
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 12.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 11.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 11.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 11.8
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 11.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 11.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 11.4
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 11.3
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 11.2
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 11.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 11.1
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 11.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 10.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 10.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 10.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 10.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 10.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 10.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 10.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 9.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 9.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 9.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 9.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 9.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 9.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 9.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 9.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 9.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 9.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 9.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 9.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 9.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 8.7
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 8.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 8.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 8.6
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 8.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 8.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 8.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 8.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 8.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 8.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 7.9
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 7.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 7.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 7.7
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 7.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 7.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 7.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 7.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 7.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 7.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 7.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 7.1
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 7.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 7.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 6.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 6.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 6.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 6.6
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 6.5
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 6.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 6.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 6.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 6.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 6.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 6.2
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 6.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 6.1
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 6.1
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 6.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 6.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 6.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 5.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 5.8
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 5.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 5.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 5.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 5.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 5.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 5.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 5.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 5.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 5.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 5.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 5.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 5.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 5.4
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 5.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 5.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 5.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 5.1
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 5.1
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 5.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 5.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 4.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 4.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 4.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 4.8
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 4.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 4.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 4.6
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 4.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 4.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 4.4
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 4.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 4.4
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 4.4
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 4.3
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 4.3
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 4.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 4.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 4.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 4.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 4.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 4.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 4.1
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 4.1
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 4.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 4.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 4.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 3.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 3.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 3.8
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 3.7
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 3.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 3.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 3.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 3.7
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 3.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 3.6
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 3.6
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 3.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 3.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 3.5
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 3.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 3.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 3.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 3.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 3.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 3.3
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 3.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 3.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 3.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 3.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 3.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 3.1
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 3.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 3.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 3.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 3.0
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 3.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 3.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 2.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 2.9
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 2.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 2.8
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 2.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 2.7
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 2.7
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 2.7
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 2.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 2.7
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 2.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 2.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 2.6
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 2.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 2.6
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 2.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 2.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 2.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 2.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 2.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 2.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 2.2
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 2.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 2.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 2.0
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 1.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 1.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 1.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 1.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 1.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 1.8
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 1.7
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 1.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 1.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 1.3
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

24.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 24.5
FF:10176-103C5 60 years, female 24.5

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

15.4
Pig sample Sample description nTPM
Putamen
nTPM: 15.5
Samples: 4

Max nTPM: 22.7
Min nTPM: 12.1
Sample A Female 14.4
Sample B Female 12.1
Sample C Male 22.7
Sample D Male 12.6

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