COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Low
Glandular cells: High
Peripheral nerve/ganglion: Low
RNA expressioni
Consensus:36.4 nTPM
HPA:36.4 nTPM
GTEx:28.3 nTPM
FANTOM5:64.8 Scaled Tags Per Million
COLON - SINGLE CELL RNA EXPRESSION
Neuroendocrine cellsTuft cellsColonocytesGoblet cellsT-cellsNK-cellsEnteric transient amplifying cellsEnteric stem cells020406080nCPM

COLON - Antibody stainingi
Antibody HPA001863Antibody CAB010469Antibody CAB013225
Endothelial cells LowLowNot detected
Glandular cells HighMediumHigh
Peripheral nerve/ganglion -Not detectedNot detected

COLON - HPA RNA-seqi
Average nTPMi 36.4
overview
Male, age 54
Colon sample 67
nTPM: 29.9
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57
Colon sample 68
nTPM: 34.4
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80
Colon sample 69
nTPM: 48.1
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68
Colon sample 70
nTPM: 34.5
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68
Colon sample 76
nTPM: 26.4
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61
Colon sample 299
nTPM: 23.4
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80
Colon sample 300
nTPM: 40.9
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78
Colon sample 368
nTPM: 46.6
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84
Colon sample 381
nTPM: 27.6
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80
Colon sample 384
nTPM: 48
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78
Colon sample 389
nTPM: 40.9
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69
Colon sample 391
nTPM: 36.7
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72
Colon sample 403
nTPM: 35.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Max subtype nTPMi 28.3
GTEx sample id Sample description nTPM
6.98.510.42.814.701020304050607080
Colon - Sigmoid
Average nTPM: 10.1
Samples: 419

Max nTPM: 81.5
Min nTPM: 2.8
Std nTPM: 7.6
Median nTPM: 8.5
GTEX-ZQUD-1026-SM-4YCEZ 30-39 years, male 81.5
GTEX-13113-1426-SM-5EGHU 60-69 years, female 65.5
GTEX-WOFM-1926-SM-4M9R2 20-29 years, male 62.6
GTEX-Y5V6-1626-SM-4VDT2 60-69 years, male 57.0
GTEX-Z9EW-1126-SM-HLJRW 40-49 years, male 48.5
GTEX-X5EB-1126-SM-46MVV 40-49 years, male 42.2
GTEX-VJYA-2126-SM-4KL1O 60-69 years, male 40.0
GTEX-13W3W-2226-SM-5LU4M 60-69 years, female 37.5
GTEX-XMK1-1626-SM-HLJRZ 40-49 years, male 36.3
GTEX-W5WG-2026-SM-4LMIB 50-59 years, female 32.2
GTEX-WYJK-2326-SM-4ONDN 50-59 years, male 30.1
Show allShow less
10.223.142.02.885.00102030405060708090100
Colon - Transverse
Average nTPM: 28.3
Samples: 479

Max nTPM: 102.7
Min nTPM: 2.8
Std nTPM: 20.6
Median nTPM: 23.1
GTEX-14JIY-3326-SM-6871E 60-69 years, male 102.7
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 98.4
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 95.1
GTEX-ZVT2-1926-SM-5GU5T 50-59 years, female 92.4
GTEX-15RIF-1326-SM-6LPKO 20-29 years, male 85.0
GTEX-1J8Q3-2326-SM-GA8ZQ 60-69 years, male 83.6
GTEX-14XAO-2026-SM-69LOI 60-69 years, female 83.3
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 83.0
GTEX-Y5LM-1526-SM-4VDTA 40-49 years, female 80.3
GTEX-1N2DV-1426-SM-DPRYQ 40-49 years, male 80.2
GTEX-1CAMR-0926-SM-7MXTD 20-29 years, male 79.5
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COLON - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 64.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 64.8
FF:10014-101C5 62,83,84 years, mixed 64.8

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