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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPARC is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
331.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
1650.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
1336.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
1098.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
705.1
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
697.9
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
657.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
586.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
580.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
577.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
525.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
521.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
508.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
491.1
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
487.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
445.8
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
424.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
419.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
403.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
400.1
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
399.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
386.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
354.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
331.6
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
315.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
313.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
286.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
282.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
277.5
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
276.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
273.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
265.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
260.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
253.2
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
245.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
240.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
234.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
228.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
228.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
205.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
196.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
195.6
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
190.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
180.3
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
179.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
178.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
174.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
172.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
166.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
158.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
146.5
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
144.1
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
130.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
107.3
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
97.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
91.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
91.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
90.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
83.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
76.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
74.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
46.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
36.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
32.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPARC is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1375.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
8505.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
5883.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
5756.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
4926.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
4698.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
4610.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
4353.7
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
4289.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
4109.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
4039.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
3999.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
3987.0
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
3911.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
3909.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
3905.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
3780.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
3758.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
3693.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
3690.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
3679.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
3599.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
3540.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
3485.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
3382.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
3376.5
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
3331.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
3289.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
3245.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
3239.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
3153.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
3093.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
3034.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
3020.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
3009.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
2985.6
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
2983.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
2961.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
2960.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
2942.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
2913.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
2894.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
2851.4
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
2820.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
2812.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
2810.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
2800.4
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
2784.8
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
2704.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
2665.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
2599.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
2528.7
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
2521.3
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
2502.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
2498.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
2491.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
2488.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
2457.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
2434.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
2419.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
2415.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
2396.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
2389.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
2361.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
2351.3
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
2343.7
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
2337.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
2332.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
2326.9
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
2318.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
2317.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
2293.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
2287.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
2275.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
2275.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
2244.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
2241.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
2235.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
2235.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
2228.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
2200.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
2188.2
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
2178.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
2177.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
2167.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
2157.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
2157.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
2142.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
2134.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
2129.5
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
2128.8
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
2128.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
2127.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
2122.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
2115.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
2115.0
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
2110.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
2106.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
2101.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
2082.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
2080.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
2062.6
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
2061.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
2059.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
2044.1
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
2005.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
1968.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
1956.7
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
1951.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
1946.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
1942.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
1938.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
1928.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
1923.3
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
1913.3
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
1893.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
1888.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
1880.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
1877.1
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
1869.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
1867.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
1854.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
1847.6
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
1845.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
1843.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
1827.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
1826.8
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
1825.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
1822.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
1805.6
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
1796.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
1792.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
1785.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
1779.0
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
1773.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
1766.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
1765.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
1761.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
1752.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
1751.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
1745.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
1742.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
1741.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
1734.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
1732.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
1732.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
1728.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
1728.7
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
1722.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
1716.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
1694.4
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
1689.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
1687.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
1687.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
1686.1
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
1684.9
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
1683.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
1682.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
1672.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
1657.8
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
1650.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
1646.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
1641.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
1638.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
1637.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
1636.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
1635.8
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
1631.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
1630.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
1628.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
1618.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
1610.0
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
1609.6
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
1600.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
1596.4
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
1595.7
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
1590.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
1590.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
1589.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
1580.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
1572.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
1570.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
1566.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
1560.9
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
1553.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
1531.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
1528.7
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
1528.7
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
1517.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
1516.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
1514.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
1513.0
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
1509.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
1505.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
1505.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
1495.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
1485.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
1477.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
1463.5
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
1457.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
1455.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
1449.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
1448.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
1447.5
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
1445.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
1444.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
1437.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
1432.1
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
1431.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
1418.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
1406.8
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
1404.7
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
1403.2
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
1401.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
1395.8
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
1391.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
1389.2
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
1384.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
1381.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
1380.2
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
1378.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
1375.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
1374.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
1366.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
1362.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
1336.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
1333.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
1331.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
1330.0
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
1326.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
1325.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
1321.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
1319.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
1316.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
1312.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
1312.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
1309.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
1309.1
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
1302.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
1286.5
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
1286.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
1278.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
1274.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
1255.1
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
1254.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
1250.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
1243.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
1239.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
1238.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
1226.9
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
1222.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
1215.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
1214.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
1211.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
1208.2
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
1206.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
1201.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
1200.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
1197.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
1197.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
1194.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
1190.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
1185.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
1182.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
1180.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
1176.9
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
1173.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
1164.6
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
1156.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
1149.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
1143.4
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
1142.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
1140.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
1138.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
1132.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
1131.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
1131.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
1119.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
1111.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
1104.9
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
1100.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
1092.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
1090.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
1089.9
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
1089.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
1074.7
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
1071.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
1070.0
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
1066.5
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
1065.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
1062.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
1056.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
1054.9
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
1052.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
1050.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
1049.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
1049.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
1043.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
1040.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
1039.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
1038.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
1033.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
1032.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
1030.4
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
1024.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
1023.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
1017.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
1006.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
1000.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
994.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
989.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
987.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
985.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
983.6
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
977.7
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
977.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
968.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
968.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
965.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
959.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
958.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
954.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
951.6
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
948.1
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
942.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
931.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
921.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
918.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
909.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
909.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
908.9
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
906.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
901.9
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
896.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
896.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
896.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
896.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
893.2
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
886.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
886.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
885.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
880.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
865.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
861.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
858.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
856.0
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
855.1
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
852.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
845.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
839.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
836.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
828.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
822.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
821.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
821.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
817.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
812.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
809.4
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
809.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
803.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
797.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
796.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
793.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
787.8
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
782.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
780.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
777.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
772.6
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
771.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
767.2
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
747.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
744.1
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
742.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
741.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
739.3
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
736.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
735.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
735.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
735.0
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
732.2
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
726.4
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
725.3
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
723.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
720.8
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
719.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
712.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
712.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
699.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
699.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
698.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
692.4
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
684.2
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
683.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
683.3
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
671.0
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
668.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
662.2
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
646.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
646.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
645.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
640.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
629.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
628.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
627.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
624.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
618.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
611.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
603.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
602.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
600.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
596.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
590.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
585.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
584.9
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
583.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
583.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
582.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
579.4
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
579.0
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
572.2
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
572.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
565.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
562.0
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
561.9
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
561.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
558.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
555.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
550.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
545.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
542.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
536.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
531.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
525.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
518.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
517.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
507.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
506.1
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
502.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
498.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
497.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
483.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
459.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
458.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
455.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
450.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
447.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
446.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
444.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
435.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
433.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
432.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
411.6
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
404.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
380.9
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
380.8
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
374.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
370.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
366.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
361.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
353.2
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
347.7
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
346.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
344.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
330.9
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
329.6
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
327.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
309.1
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
306.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
306.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
302.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
298.8
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
298.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
297.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
297.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
294.6
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
293.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
290.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
281.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
280.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
278.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
275.5
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
270.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
254.5
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
254.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
249.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
241.5
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
229.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
222.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
217.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
210.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
209.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
208.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
204.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
202.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
201.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
198.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
190.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
182.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
171.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
169.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
165.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
162.5
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
156.9
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
156.2
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
141.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
139.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
139.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
135.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
135.3
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
130.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
129.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
120.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
116.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
113.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
110.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
104.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
100.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
70.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
68.4
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
66.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
42.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPARC is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1199.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
6213.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
5025.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
3838.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
3336.3
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
3072.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
2266.0
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
2204.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
2104.9
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
2033.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
2022.9
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
1996.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
1862.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
1861.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
1786.4
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
1699.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
1672.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
1653.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
1637.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
1618.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
1615.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
1591.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
1584.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
1578.8
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
1534.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
1498.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
1477.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
1445.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
1433.7
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
1414.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
1410.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
1402.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
1398.5
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
1393.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
1363.9
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
1348.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
1346.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
1336.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
1325.2
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
1323.0
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
1308.0
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
1274.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
1262.8
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
1260.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
1194.0
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
1172.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
1138.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
1133.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
1073.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
1047.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
1037.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
1036.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
1027.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
1018.9
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
1006.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
1005.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
957.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
943.1
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
927.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
880.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
784.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
779.3
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
773.8
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
770.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
761.4
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
752.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
741.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
737.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
720.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
700.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
691.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
690.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
684.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
645.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
628.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
616.5
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
614.1
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
573.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
556.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
545.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
537.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
531.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
529.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
509.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
477.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
471.1
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
454.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
438.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
420.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
392.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
388.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
354.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
351.3
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
347.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
337.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
306.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
237.7
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
166.4
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
163.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
145.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPARC is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
395.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
3781.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
2021.9
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
1913.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
1881.5
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
1834.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
1735.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
1524.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
1520.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
1473.9
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
1455.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
1337.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
1315.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
1256.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
1255.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
1253.7
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
1238.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
1226.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
1176.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
1123.4
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
1121.2
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
1108.4
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
1100.1
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
1086.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
977.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
929.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
923.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
914.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
908.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
904.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
897.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
896.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
893.3
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
872.2
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
871.4
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
862.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
861.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
858.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
854.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
817.6
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
807.5
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
807.1
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
795.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
780.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
766.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
764.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
745.6
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
738.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
698.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
692.3
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
684.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
643.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
634.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
627.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
623.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
618.4
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
589.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
581.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
577.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
572.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
571.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
566.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
564.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
556.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
552.8
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
552.7
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
540.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
531.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
524.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
521.3
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
518.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
500.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
491.9
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
482.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
480.9
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
476.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
472.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
471.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
470.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
467.7
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
467.7
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
461.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
452.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
447.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
443.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
433.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
418.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
416.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
415.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
415.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
411.3
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
410.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
400.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
399.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
398.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
391.4
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
389.3
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
384.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
373.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
372.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
371.1
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
371.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
369.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
368.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
365.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
360.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
357.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
356.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
345.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
342.4
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
339.8
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
338.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
331.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
331.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
325.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
322.0
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
320.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
315.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
309.8
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
304.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
302.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
295.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
294.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
292.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
292.4
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
289.2
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
289.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
288.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
285.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
285.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
284.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
283.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
275.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
268.1
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
267.3
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
265.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
261.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
257.4
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
256.8
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
256.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
248.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
244.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
236.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
236.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
235.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
234.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
234.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
232.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
225.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
218.9
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
216.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
215.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
213.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
212.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
211.7
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
210.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
209.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
208.5
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
206.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
204.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
202.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
202.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
197.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
197.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
194.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
194.2
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
193.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
192.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
190.4
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
186.9
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
185.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
185.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
183.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
180.0
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
178.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
178.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
178.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
174.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
173.5
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
172.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
172.8
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
170.5
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
170.1
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
166.7
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
166.1
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
159.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
159.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
158.5
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
158.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
157.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
157.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
155.9
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
155.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
155.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
155.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
153.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
151.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
151.1
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
147.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
147.0
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
146.9
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
145.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
140.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
138.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
137.0
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
136.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
135.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
134.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
133.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
132.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
131.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
129.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
128.1
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
126.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
125.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
124.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
120.0
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
119.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
114.9
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
113.5
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
112.1
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
112.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
105.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
103.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
99.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
98.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
97.0
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
96.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
93.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
91.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
90.5
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
85.9
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
84.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
83.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
83.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
82.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
82.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
82.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
82.4
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
81.5
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
80.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
76.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
75.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
73.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
73.2
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
73.0
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
72.8
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
67.7
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
66.1
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
65.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
64.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
60.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
59.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
59.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
58.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
57.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
55.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
53.5
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
50.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
48.3
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
46.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
45.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
45.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
44.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
41.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
40.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
40.3
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
39.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
35.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
35.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
29.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
29.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
29.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
28.5
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
27.7
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
27.1
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
18.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
15.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
12.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
10.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
10.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
9.1
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
7.3
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0076330003
Tumor
2.6
CPT0001260009
Tumor
1.5
CPT0000640003
Tumor
1.4
CPT0088630003
Tumor
1.4
CPT0015910003
Tumor
1.3
CPT0085670003
Tumor
1.3
CPT0007860003
Tumor
1.2
CPT0001340003
Tumor
1.2
CPT0084560003
Tumor
1.2
CPT0079270003
Tumor
1.1
CPT0088900003
Tumor
1.0
CPT0077490003
Tumor
1.0
CPT0025110003
Tumor
1.0
CPT0011240003
Tumor
0.9
CPT0081600003
Tumor
0.9
CPT0086950003
Tumor
0.8
CPT0012080003
Tumor
0.8
CPT0066480003
Tumor
0.8
CPT0088760003
Tumor
0.8
CPT0025350003
Tumor
0.8
CPT0012670003
Tumor
0.8
CPT0000780007
Tumor
0.8
CPT0010160003
Tumor
0.8
CPT0075130003
Tumor
0.8
CPT0081990003
Tumor
0.7
CPT0089460004
Tumor
0.7
CPT0092730003
Tumor
0.7
CPT0088690003
Tumor
0.7
CPT0088550004
Tumor
0.7
CPT0065690003
Tumor
0.7
CPT0006440003
Tumor
0.7
CPT0075560003
Tumor
0.7
CPT0065870003
Tumor
0.7
CPT0017850003
Tumor
0.6
CPT0071150004
Tumor
0.6
CPT0092290003
Tumor
0.6
CPT0023350003
Tumor
0.6
CPT0065930003
Tumor
0.6
CPT0066470004
Tumor
0.6
CPT0014370004
Tumor
0.6
CPT0021240003
Tumor
0.6
CPT0075720003
Tumor
0.6
CPT0079230003
Tumor
0.6
CPT0025230003
Tumor
0.6
CPT0017410003
Tumor
0.5
CPT0009000003
Tumor
0.5
CPT0078510003
Tumor
0.5
CPT0069160003
Tumor
0.5
CPT0086030003
Tumor
0.5
CPT0086820003
Tumor
0.5
CPT0092790003
Tumor
0.5
CPT0012280003
Tumor
0.5
CPT0077310003
Tumor
0.5
CPT0086870003
Tumor
0.5
CPT0026410003
Tumor
0.5
CPT0014160003
Tumor
0.4
CPT0006900003
Tumor
0.4
CPT0089020003
Tumor
0.4
CPT0019990003
Tumor
0.4
CPT0025880003
Tumor
0.4
CPT0063630003
Tumor
0.4
CPT0012900004
Tumor
0.4
CPT0065750003
Tumor
0.4
CPT0079410003
Tumor
0.3
CPT0012370003
Tumor
0.3
CPT0063320003
Tumor
0.3
CPT0015810003
Tumor
0.3
CPT0079480003
Tumor
0.3
CPT0025580004
Tumor
0.3
CPT0006630003
Tumor
0.2
CPT0069000003
Tumor
0.2
CPT0012550003
Tumor
0.2
CPT0002350011
Tumor
0.2
CPT0001220008
Tumor
0.2
CPT0023690003
Tumor
0.1
CPT0024670003
Tumor
0.1
CPT0088480003
Tumor
0.1
CPT0087040003
Tumor
0.1
CPT0000870016
Tumor
0.1
CPT0019130003
Tumor
0.1
CPT0007320003
Tumor
0.1
CPT0078930003
Tumor
0.1
CPT0011410003
Tumor
0.1
CPT0009060003
Tumor
0.1
CPT0001540009
Tumor
0.1
CPT0077110003
Tumor
0.1
CPT0020120003
Tumor
0.1
CPT0065430003
Tumor
0.0
CPT0078830003
Tumor
0.0
CPT0001180009
Tumor
0.0
CPT0025290003
Tumor
0.0
CPT0092190003
Normal
0.0
CPT0092160003
Tumor
-0.1
CPT0002270011
Tumor
-0.1
CPT0079380003
Tumor
-0.1
CPT0077320001
Normal
-0.1
CPT0010120001
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0078990003
Tumor
-0.2
CPT0078800003
Tumor
-0.2
CPT0014450004
Tumor
-0.2
CPT0001270001
Normal
-0.2
CPT0025170003
Tumor
-0.2
CPT0010110003
Tumor
-0.3
CPT0086360003
Tumor
-0.3
CPT0018250001
Normal
-0.3
CPT0076350001
Normal
-0.3
CPT0065810003
Tumor
-0.3
CPT0026420001
Normal
-0.4
CPT0081880003
Tumor
-0.4
CPT0075170001
Normal
-0.4
CPT0084590001
Normal
-0.4
CPT0012180003
Tumor
-0.4
CPT0012290003
Normal
-0.4
CPT0025050003
Tumor
-0.4
CPT0086970003
Normal
-0.5
CPT0001190001
Normal
-0.5
CPT0024680001
Normal
-0.5
CPT0079180003
Tumor
-0.5
CPT0001500009
Tumor
-0.5
CPT0064370003
Tumor
-0.5
CPT0014470001
Normal
-0.5
CPT0012570003
Normal
-0.5
CPT0063640001
Normal
-0.6
CPT0023360001
Normal
-0.6
CPT0006950001
Normal
-0.6
CPT0000890001
Normal
-0.6
CPT0006530001
Normal
-0.6
CPT0077140001
Normal
-0.6
CPT0065820001
Normal
-0.6
CPT0012090003
Normal
-0.6
CPT0089040001
Normal
-0.6
CPT0007470001
Normal
-0.6
CPT0088570001
Normal
-0.6
CPT0088710001
Normal
-0.6
CPT0001510001
Normal
-0.6
CPT0088970003
Tumor
-0.6
CPT0013790003
Normal
-0.6
CPT0012920003
Normal
-0.6
CPT0078530001
Normal
-0.6
CPT0079510001
Normal
-0.6
CPT0081620001
Normal
-0.7
CPT0017450001
Normal
-0.7
CPT0066430001
Normal
-0.7
CPT0086830003
Normal
-0.7
CPT0002370001
Normal
-0.7
CPT0065450001
Normal
-0.7
CPT0020020001
Normal
-0.7
CPT0012770003
Normal
-0.7
CPT0012640003
Normal
-0.7
CPT0069010001
Normal
-0.7
CPT0088920001
Normal
-0.7
CPT0066520001
Normal
-0.7
CPT0088500001
Normal
-0.7
CPT0087050003
Normal
-0.7
CPT0015730003
Tumor
-0.7
CPT0019160001
Normal
-0.7
CPT0000790001
Normal
-0.8
CPT0082010001
Normal
-0.8
CPT0088780001
Normal
-0.8
CPT0025610001
Normal
-0.8
CPT0009020003
Normal
-0.8
CPT0086370003
Normal
-0.8
CPT0063330001
Normal
-0.8
CPT0014350001
Normal
-0.8
CPT0077500001
Normal
-0.8
CPT0023710001
Normal
-0.8
CPT0078840001
Normal
-0.8
CPT0014130001
Normal
-0.8
CPT0025920001
Normal
-0.8
CPT0020130001
Normal
-0.8
CPT0025060001
Normal
-0.9
CPT0079300001
Normal
-0.9
CPT0092800003
Normal
-0.9
CPT0075570001
Normal
-0.9
CPT0010170001
Normal
-0.9
CPT0007870001
Normal
-0.9
CPT0079000001
Normal
-0.9
CPT0089480003
Normal
-0.9
CPT0001550001
Normal
-0.9
CPT0078940001
Normal
-0.9
CPT0078670001
Normal
-0.9
CPT0006730001
Normal
-0.9
CPT0092740003
Normal
-0.9
CPT0092310003
Normal
-0.9
CPT0078660003
Tumor
-0.9
CPT0086890003
Normal
-0.9
CPT0069190001
Normal
-1.0
CPT0064400001
Normal
-1.0
CPT0079430001
Normal
-1.0
CPT0009080003
Normal
-1.0
CPT0001230001
Normal
-1.0
CPT0088640003
Normal
-1.1
CPT0001350001
Normal
-1.1
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
