Expression of SPARC in head and neck cancer

HEAD AND NECK SQUAMOUS CELL CARCINOMA (TCGA) - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

SPARC is not prognostic in Head and Neck Squamous Cell Carcinoma (TCGA)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 636.23

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average TPM

810.4

Number of samples

492

Samples

Sample	Description	TPM
TCGA-IQ-A61O-01A	0 years, male, white, stage:Stage IVA, dead, 421 days	9523.9
TCGA-HD-7831-01A	0 years, male, white, stage:Stage IVA, alive, 667 days	8005.9
TCGA-CN-6016-01A	0 years, male, white, stage:Stage IVA, alive, 1443 days	7205.4
TCGA-CR-7386-01A	0 years, male, white, stage:Stage IVA, alive, 1430 days	5559.3
TCGA-CR-7376-01A	0 years, male, white, stage:Stage III, alive, 972 days	4802.8
TCGA-CN-4728-01A	0 years, male, white, stage:Stage IVA, alive, 1724 days	4626.2
TCGA-CQ-7072-01A	0 years, male, white, stage:Stage II, alive, 2359 days	4285.0
TCGA-CQ-6224-01A	0 years, male, white, stage:Stage IVA, alive, 1721 days	4165.0
TCGA-CN-4740-01A	0 years, female, white, stage:Stage IVA, dead, 839 days	3988.5
TCGA-CR-7382-01A	0 years, male, white, stage:Stage IVA, alive, 796 days	3962.6
TCGA-CV-7103-01A	0 years, male, white, stage:Stage IVA, dead, 1591 days	3926.7
TCGA-CN-6019-01A	0 years, male, white, stage:Stage IVA, alive, 1038 days	3921.4
TCGA-CV-6934-01A	0 years, female, white, stage:Stage IVA, dead, 65 days	3687.4
TCGA-CV-5444-01A	0 years, male, black or african american, stage:Stage IVA, alive, 2437 days	3672.0
TCGA-CV-7435-01A	0 years, female, white, stage:Stage IVA, dead, 4680 days	3436.5
TCGA-CR-7367-01A	0 years, male, white, stage:Stage IVA, alive, 1440 days	3373.2
TCGA-CR-7397-01A	0 years, male, white, stage:Stage IVA, alive, 754 days	3353.0
TCGA-BA-4078-01A	0 years, male, white, stage:'--, dead, 276 days	3187.1
TCGA-CR-5247-01A	0 years, male, black or african american, stage:'--, alive, 358 days	3098.2
TCGA-P3-A6T8-01A	0 years, male, white, stage:Stage IVA, alive, 400 days	3062.2
TCGA-CN-6989-01A	0 years, male, white, stage:Stage IVA, dead, 980 days	2964.6
TCGA-CR-6474-01A	0 years, male, white, stage:Stage IVA, dead, 564 days	2906.4
TCGA-CN-5370-01A	0 years, male, white, stage:Stage III, dead, 259 days	2904.2
TCGA-CQ-6221-01A	0 years, male, white, stage:'--, alive, 1000 days	2889.6
TCGA-CN-5361-01A	0 years, male, white, stage:Stage IVA, dead, 2120 days	2844.3
TCGA-HD-7754-01A	0 years, male, white, stage:Stage IVA, alive, 783 days	2839.3
TCGA-CV-7433-01A	0 years, male, white, stage:Stage IVA, dead, 601 days	2819.4
TCGA-BB-8596-01A	0 years, female, white, stage:Stage IVA, alive, 2161 days	2680.1
TCGA-CQ-5334-01A	0 years, male, white, stage:Stage IVA, dead, 129 days	2657.5
TCGA-CV-7177-01A	0 years, female, white, stage:Stage II, dead, 663 days	2652.9
TCGA-UF-A7J9-01A	0 years, male, white, stage:Stage IVA, alive, 1358 days	2561.0
TCGA-CV-7235-01A	0 years, male, white, stage:Stage II, alive, 2347 days	2484.4
TCGA-CN-5359-01A	0 years, male, white, stage:Stage IVA, dead, 377 days	2429.1
TCGA-UF-A7JD-01A	0 years, male, stage:Stage IVA, dead, 739 days	2362.2
TCGA-BA-5557-01A	0 years, female, stage:Stage III, alive, 623 days	2336.1
TCGA-CV-6943-01A	0 years, male, white, stage:Stage III, dead, 602 days	2321.5
TCGA-CQ-5330-01A	0 years, female, white, stage:Stage IVA, alive, 1897 days	2295.3
TCGA-CN-5358-01A	0 years, male, white, stage:Stage II, dead, 261 days	2289.9
TCGA-D6-6515-01A	0 years, female, white, stage:Stage II, dead, 403 days	2285.5
TCGA-IQ-7631-01A	0 years, female, white, stage:Stage II, alive, 1172 days	2271.9
TCGA-CR-7401-01A	0 years, male, white, stage:Stage I, alive, 1077 days	2254.4
TCGA-BA-4074-01A	0 years, male, white, stage:Stage IVA, dead, 462 days	2154.8
TCGA-CN-4742-01A	0 years, female, white, stage:Stage IVA, dead, 397 days	2105.7
TCGA-BA-A6DG-01A	0 years, male, white, stage:'--, dead, 69 days	2081.0
TCGA-CV-7568-01A	0 years, female, white, stage:Stage IVA, dead, 927 days	2066.4
TCGA-CV-7104-01A	0 years, female, white, stage:Stage IVA, dead, 393 days	2065.2
TCGA-BA-A8YP-01A	0 years, male, black or african american, stage:Stage IVB, alive, 499 days	2060.4
TCGA-CV-7416-01A	0 years, female, white, stage:Stage IVA, dead, 763 days	2055.9
TCGA-CN-5373-01A	0 years, female, white, stage:Stage I, alive, 1584 days	2021.5
TCGA-CN-4737-01A	0 years, male, white, stage:Stage IVA, alive, 625 days	1989.4
TCGA-CR-7377-01A	0 years, male, white, stage:Stage IVA, dead, 279 days	1938.7
TCGA-CR-7380-01A	0 years, male, white, stage:Stage IVB, dead, 606 days	1894.2
TCGA-CV-7178-01A	0 years, female, white, stage:Stage IVA, dead, 2166 days	1891.6
TCGA-CN-5355-01A	0 years, male, black or african american, stage:Stage IVA, alive, 1278 days	1847.3
TCGA-CN-6022-01A	0 years, male, white, stage:Stage IVA, dead, 281 days	1813.3
TCGA-CN-5363-01A	0 years, male, black or african american, stage:Stage IVB, dead, 253 days	1806.4
TCGA-CQ-5329-01A	0 years, female, white, stage:Stage II, alive, 2143 days	1792.7
TCGA-DQ-5630-01A	0 years, male, white, stage:'--, alive, 1030 days	1762.1
TCGA-CV-5434-01A	0 years, male, black or african american, stage:Stage IVA, dead, 3314 days	1736.7
TCGA-CV-6941-01A	0 years, male, white, stage:Stage III, dead, 342 days	1726.8
TCGA-CX-7219-01A	0 years, male, black or african american, stage:Stage IVA, alive, 1045 days	1718.4
TCGA-CN-6018-01A	0 years, female, white, stage:Stage IVA, dead, 580 days	1716.7
TCGA-CV-7090-01A	0 years, male, white, stage:Stage II, alive, 5252 days	1669.7
TCGA-UF-A7JJ-01A	0 years, male, stage:Stage IVA, alive, 549 days	1660.2
TCGA-CV-5978-01A	0 years, female, black or african american, stage:Stage IVB, dead, 215 days	1651.0
TCGA-CN-4726-01A	0 years, male, white, stage:Stage IVA, dead, 142 days	1642.3
TCGA-BB-A5HU-01A	0 years, male, white, stage:Stage IVA, alive, 782 days	1579.2
TCGA-CR-7392-01A	0 years, female, white, stage:Stage IVA, alive, 1425 days	1539.5
TCGA-CR-7379-01A	0 years, female, white, stage:Stage IVA, alive, 1036 days	1533.4
TCGA-CV-7102-01A	0 years, female, white, stage:Stage IVA, dead, 56 days	1519.2
TCGA-CN-A63V-01A	0 years, male, white, stage:Stage IVA, alive, 679 days	1505.5
TCGA-CX-7085-01A	0 years, female, white, stage:Stage I, alive, 321 days	1485.2
TCGA-CQ-A4C7-01A	0 years, male, white, stage:Stage III, dead, 353 days	1477.8
TCGA-CV-7429-01A	0 years, male, white, stage:Stage IVA, dead, 107 days	1467.7
TCGA-CR-7372-01A	0 years, male, white, stage:Stage I, alive, 759 days	1465.6
TCGA-BA-6871-01A	0 years, male, white, stage:'--, dead, 108 days	1442.1
TCGA-CN-4736-01A	0 years, female, white, stage:'--, dead, 395 days	1430.0
TCGA-CN-6994-01A	0 years, male, white, stage:Stage IVA, alive, 1183 days	1408.9
TCGA-CV-A464-01A	0 years, male, white, stage:Stage III, alive, 1722 days	1392.9
TCGA-CR-7383-01A	0 years, female, white, stage:Stage I, dead, 521 days	1357.3
TCGA-CR-7398-01A	0 years, female, white, stage:Stage II, alive, 156 days	1346.0
TCGA-CN-5366-01A	0 years, male, white, stage:Stage IVA, dead, 360 days	1345.1
TCGA-IQ-A61J-01A	0 years, male, white, stage:Stage IVA, alive, 1021 days	1338.2
TCGA-DQ-5631-01A	0 years, male, white, stage:'--, dead, 548 days	1337.1
TCGA-CN-5356-01A	0 years, male, white, stage:Stage III, alive, 1409 days	1296.1
TCGA-CR-7390-01A	0 years, male, white, stage:Stage IVA, alive, 1508 days	1295.4
TCGA-CQ-A4C6-01A	0 years, male, asian, stage:Stage II, alive, 1353 days	1281.7
TCGA-BA-6873-01A	0 years, male, white, stage:Stage IVA, alive, 122 days	1272.8
TCGA-CQ-A4CB-01A	0 years, male, stage:Stage III, alive, 893 days	1269.9
TCGA-CV-7424-01A	0 years, male, asian, stage:Stage IVA, dead, 453 days	1264.5
TCGA-CR-6484-01A	0 years, female, asian, stage:Stage IVA, alive, 354 days	1256.0
TCGA-CQ-5332-01A	0 years, male, white, stage:Stage III, dead, 317 days	1247.9
TCGA-CV-7261-01A	0 years, male, white, stage:Stage IVA, alive, 1512 days	1247.2
TCGA-CR-7365-01A	0 years, male, white, stage:Stage IVA, alive, 1191 days	1240.3
TCGA-CV-7097-01A	0 years, male, white, stage:Stage II, dead, 385 days	1225.3
TCGA-BA-5555-01A	0 years, male, black or african american, stage:Stage IVA, alive, 520 days	1224.3
TCGA-CR-5243-01A	0 years, male, white, stage:'--, alive, 2562 days	1219.9
TCGA-CV-6935-01A	0 years, male, white, stage:Stage IVA, dead, 295 days	1211.2
TCGA-CV-7254-01A	0 years, male, white, stage:Stage II, dead, 1459 days	1203.6
TCGA-CV-7263-01A	0 years, male, black or african american, stage:Stage II, dead, 560 days	1193.3
TCGA-CV-5971-01A	0 years, male, white, stage:Stage IVA, alive, 701 days	1179.3
TCGA-CR-6488-01A	0 years, female, white, stage:Stage II, alive, 379 days	1160.2
TCGA-P3-A5QA-01A	0 years, male, stage:Stage I, alive, 2182 days	1128.2
TCGA-CV-7100-01A	0 years, male, white, stage:Stage III, dead, 274 days	1126.1
TCGA-CV-7255-01A	0 years, female, white, stage:Stage IVA, dead, 64 days	1114.2
TCGA-CR-6477-01A	0 years, female, white, stage:'--, alive, 514 days	1098.4
TCGA-H7-8502-01A	0 years, male, white, stage:Stage IVA, alive, 458 days	1098.3
TCGA-CV-5435-01A	0 years, male, white, stage:Stage IVA, dead, 2319 days	1094.2
TCGA-CV-7410-01A	0 years, male, white, stage:Stage III, dead, 6417 days	1071.9
TCGA-QK-AA3K-01A	0 years, male, black or african american, stage:Stage IVA, alive, 253 days	1070.1
TCGA-CR-7394-01A	0 years, male, white, stage:Stage IVA, alive, 1346 days	1062.2
TCGA-CQ-6227-01A	0 years, male, white, stage:Stage IVA, dead, 129 days	1060.2
TCGA-CV-7091-01A	0 years, male, white, stage:Stage I, alive, 3381 days	1052.5
TCGA-CV-7421-01A	0 years, male, white, stage:Stage IVA, dead, 2 days	1041.7
TCGA-D6-6824-01A	0 years, male, white, stage:Stage IVA, alive, 77 days	1037.7
TCGA-HD-8635-01A	0 years, female, white, stage:Stage III, alive, 695 days	1037.6
TCGA-H7-8501-01A	0 years, male, white, stage:Stage IVA, alive, 461 days	1036.7
TCGA-CN-6024-01A	0 years, male, white, stage:Stage IVA, dead, 337 days	1036.1
TCGA-CV-6960-01A	0 years, male, black or african american, stage:Stage III, dead, 862 days	1029.9
TCGA-CR-6470-01A	0 years, male, white, stage:Stage II, alive, 1521 days	1018.6
TCGA-CN-6020-01A	0 years, male, black or african american, stage:Stage III, dead, 205 days	1012.3
TCGA-CV-7406-01A	0 years, male, white, stage:Stage II, dead, 1748 days	999.3
TCGA-CV-7414-01A	0 years, male, white, stage:Stage IVA, dead, 14 days	990.9
TCGA-UF-A71A-01A	0 years, male, white, stage:Stage IVA, dead, 86 days	988.3
TCGA-DQ-5624-01A	0 years, female, white, stage:'--, alive, 1778 days	985.2
TCGA-T3-A92M-01A	0 years, male, black or african american, stage:Stage IVA, alive, 417 days	976.4
TCGA-CV-7236-01A	0 years, female, white, stage:Stage IVA, dead, 144 days	975.7
TCGA-CV-7245-01A	0 years, male, white, stage:Stage IVA, alive, 797 days	963.7
TCGA-CN-6996-01A	0 years, female, white, stage:Stage IVA, dead, 530 days	955.1
TCGA-CQ-6219-01A	0 years, female, white, stage:Stage IVA, dead, 479 days	952.2
TCGA-CN-4723-01A	0 years, male, white, stage:Stage IVA, alive, 1699 days	951.2
TCGA-CN-6017-01A	0 years, male, white, stage:Stage IVA, dead, 853 days	947.8
TCGA-CN-A63T-01A	0 years, male, white, stage:Stage IVA, alive, 225 days	946.8
TCGA-CV-5431-01A	0 years, male, white, stage:Stage IVA, dead, 522 days	940.0
TCGA-DQ-7592-01A	0 years, male, american indian or alaska native, stage:'--, alive, 1143 days	935.5
TCGA-CN-4733-01A	0 years, male, white, stage:Stage III, alive, 1586 days	933.3
TCGA-CV-5441-01A	0 years, male, white, stage:Stage IVA, alive, 2886 days	915.4
TCGA-CN-A497-01A	0 years, male, stage:Stage III, alive, 1065 days	903.4
TCGA-F7-8489-01A	0 years, male, white, stage:Stage II, alive, 658 days	894.7
TCGA-CV-5976-01A	0 years, male, white, stage:Stage IVA, alive, 1478 days	894.1
TCGA-CV-7252-01A	0 years, female, black or african american, stage:Stage IVA, dead, 151 days	889.9
TCGA-UF-A7JH-01A	0 years, male, black or african american, stage:Stage IVA, alive, 896 days	882.7
TCGA-HD-8224-01A	0 years, male, white, stage:Stage IVA, dead, 446 days	880.6
TCGA-D6-6825-01A	0 years, male, white, stage:Stage I, alive, 491 days	878.3
TCGA-BB-4228-01A	0 years, male, white, stage:Stage III, alive, 559 days	868.2
TCGA-CN-4731-01A	0 years, female, white, stage:Stage IVA, dead, 998 days	865.1
TCGA-CN-4729-01A	0 years, male, white, stage:Stage III, alive, 392 days	864.1
TCGA-CN-4727-01A	0 years, male, white, stage:Stage IVA, alive, 1560 days	858.7
TCGA-CQ-6218-01A	0 years, female, white, stage:Stage IVA, alive, 1253 days	852.7
TCGA-DQ-5625-01A	0 years, female, white, stage:'--, dead, 1133 days	849.5
TCGA-CR-6471-01A	0 years, male, white, stage:Stage IVA, dead, 1202 days	844.2
TCGA-BA-6872-01A	0 years, male, white, stage:'--, dead, 384 days	837.4
TCGA-CR-7402-01A	0 years, male, white, stage:'--, alive, 911 days	831.3
TCGA-D6-6827-01A	0 years, female, white, stage:Stage I, alive, 568 days	821.4
TCGA-CV-5970-01A	0 years, male, white, stage:Stage IVA, dead, 406 days	820.3
TCGA-CN-A49A-01A	0 years, male, white, stage:Stage IVB, dead, 526 days	820.1
TCGA-CR-7393-01A	0 years, male, white, stage:Stage III, alive, 993 days	814.8
TCGA-WA-A7H4-01A	0 years, male, white, stage:Stage II, alive, 443 days	811.6
TCGA-CV-7415-01A	0 years, male, white, stage:Stage IVA, dead, 695 days	808.9
TCGA-BA-5559-01A	0 years, male, white, stage:'--, dead, 2083 days	808.3
TCGA-CV-5436-01A	0 years, male, stage:Stage IVA, dead, 584 days	794.9
TCGA-CN-4734-01A	0 years, male, white, stage:Stage II, alive, 1690 days	792.3
TCGA-HD-7753-01A	0 years, male, black or african american, stage:Stage I, alive, 866 days	787.2
TCGA-CQ-A4CI-01A	0 years, male, white, stage:Stage III, alive, 950 days	786.9
TCGA-CQ-7069-01A	0 years, female, white, stage:Stage II, alive, 1274 days	775.5
TCGA-4P-AA8J-01A	0 years, male, black or african american, stage:Stage IVA, alive, 102 days	764.7
TCGA-CV-7413-01A	0 years, female, white, stage:Stage II, dead, 294 days	749.9
TCGA-CV-6959-01A	0 years, male, white, stage:Stage III, dead, 256 days	748.9
TCGA-CV-6961-01A	0 years, male, white, stage:Stage II, dead, 76 days	742.1
TCGA-WA-A7GZ-01A	0 years, male, white, stage:'--, dead, 625 days	727.2
TCGA-D6-8569-01A	0 years, male, white, stage:Stage II, alive, 770 days	726.4
TCGA-CV-6954-01A	0 years, male, black or african american, stage:Stage IVA, dead, 2002 days	724.5
TCGA-D6-8568-01A	0 years, male, white, stage:Stage II, alive, 759 days	721.5
TCGA-CR-7370-01A	0 years, female, white, stage:'--, alive, 105 days	719.4
TCGA-UF-A7JA-01A	0 years, female, white, stage:Stage IVA, alive, 2265 days	715.5
TCGA-CN-6997-01A	0 years, male, white, stage:Stage IVA, dead, 988 days	703.8
TCGA-CV-6940-01A	0 years, female, white, stage:Stage III, dead, 804 days	694.6
TCGA-CV-7238-01A	0 years, female, white, stage:Stage II, alive, 2727 days	691.8
TCGA-CV-6950-01A	0 years, male, white, stage:Stage IVA, dead, 459 days	686.4
TCGA-CR-7369-01A	0 years, male, white, stage:Stage IVA, dead, 1090 days	682.6
TCGA-CV-7422-01A	0 years, female, white, stage:Stage IVA, dead, 1037 days	678.4
TCGA-F7-8298-01A	0 years, male, white, stage:Stage I, alive, 995 days	676.7
TCGA-CQ-6228-01A	0 years, female, white, stage:Stage IVA, dead, 456 days	674.2
TCGA-UF-A718-01A	0 years, male, white, stage:Stage IVA, alive, 1971 days	662.1
TCGA-D6-6826-01A	0 years, female, white, stage:Stage IVA, dead, 348 days	661.4
TCGA-CV-6952-01A	0 years, female, white, stage:Stage IVA, dead, 185 days	660.6
TCGA-BA-A4IF-01A	0 years, male, white, stage:'--, alive, 895 days	657.0
TCGA-CV-A45Y-01A	0 years, male, american indian or alaska native, stage:Stage IVA, dead, 2703 days	654.0
TCGA-UF-A7JV-01A	0 years, female, white, stage:Stage IVA, dead, 90 days	652.8
TCGA-CR-7371-01A	0 years, female, white, stage:Stage III, dead, 94 days	647.8
TCGA-CV-7250-01A	0 years, male, white, stage:Stage IVA, dead, 2900 days	645.5
TCGA-CQ-A4CG-01A	0 years, female, white, stage:Stage III, dead, 430 days	643.6
TCGA-BA-4075-01A	0 years, male, black or african american, stage:Stage III, dead, 283 days	640.5
TCGA-CV-A6JZ-01A	0 years, male, white, stage:Stage II, alive, 714 days	640.3
TCGA-CV-7440-01A	0 years, male, white, stage:Stage II, dead, 675 days	639.5
TCGA-BA-A4II-01A	0 years, male, white, stage:Stage II, alive, 918 days	639.4
TCGA-CV-A468-01A	0 years, male, stage:Stage IVA, dead, 464 days	636.6
TCGA-CN-6992-01A	0 years, male, white, stage:Stage IVA, alive, 1066 days	635.9
TCGA-CN-4722-01A	0 years, female, white, stage:Stage II, alive, 1483 days	635.7
TCGA-CV-5979-01A	0 years, male, white, stage:Stage IVA, alive, 1315 days	635.0
TCGA-CV-7095-01A	0 years, female, stage:Stage II, dead, 572 days	631.0
TCGA-CR-7391-01A	0 years, female, white, stage:Stage I, alive, 913 days	630.7
TCGA-CV-7438-01A	0 years, female, white, stage:Stage I, dead, 194 days	627.0
TCGA-CR-7395-01A	0 years, female, white, stage:Stage II, alive, 930 days	624.3
TCGA-HD-A4C1-01A	0 years, female, black or african american, stage:Stage IVA, alive, 11 days	622.0
TCGA-CR-7388-01A	0 years, female, white, stage:'--, dead, 823 days	620.9
TCGA-BA-5151-01A	0 years, male, white, stage:Stage IVA, alive, 722 days	620.9
TCGA-CR-5250-01A	0 years, male, white, stage:'--, alive, 799 days	618.9
TCGA-CN-5364-01A	0 years, male, white, stage:Stage IVA, dead, 493 days	614.1
TCGA-CR-6472-01A	0 years, male, white, stage:'--, alive, 1050 days	606.8
TCGA-H7-A76A-01A	0 years, male, white, stage:'--, alive, 637 days	606.6
TCGA-DQ-5629-01A	0 years, male, white, stage:'--, dead, 941 days	601.9
TCGA-IQ-A61E-01A	0 years, female, white, stage:Stage III, alive, 1147 days	592.9
TCGA-CV-A45R-01A	0 years, male, white, stage:Stage III, alive, 5480 days	590.3
TCGA-CQ-6229-01A	0 years, male, white, stage:Stage II, alive, 1179 days	587.7
TCGA-CV-A460-01A	0 years, male, white, stage:'--, dead, 1838 days	587.5
TCGA-CV-6933-01A	0 years, male, white, stage:Stage III, dead, 2741 days	585.6
TCGA-IQ-7630-01A	0 years, male, white, stage:Stage II, alive, 485 days	580.4
TCGA-CV-7446-01A	0 years, male, white, stage:Stage IVA, dead, 1093 days	571.3
TCGA-CR-7364-01A	0 years, male, white, stage:Stage III, alive, 1435 days	571.1
TCGA-CN-4725-01A	0 years, male, white, stage:Stage II, alive, 1157 days	565.6
TCGA-CQ-A4C9-01A	0 years, male, stage:Stage III, alive, 707 days	565.3
TCGA-BB-A6UO-01A	0 years, female, white, stage:Stage IVA, dead, 268 days	561.9
TCGA-QK-A6VB-01A	0 years, male, white, stage:Stage IVA, alive, 641 days	561.8
TCGA-CN-5369-01A	0 years, female, white, stage:Stage IVA, dead, 1 days	560.6
TCGA-CX-7082-01A	0 years, male, white, stage:Stage IVA, dead, 11 days	551.9
TCGA-CN-4735-01A	0 years, male, white, stage:Stage IVA, alive, 1737 days	550.4
TCGA-CR-6493-01A	0 years, male, black or african american, stage:Stage IVA, dead, 282 days	549.9
TCGA-CV-7411-01A	0 years, female, white, stage:Stage IVA, dead, 2717 days	549.8
TCGA-T2-A6X2-01A	0 years, male, white, stage:Stage III, alive, 987 days	547.5
TCGA-MT-A67D-01A	0 years, male, white, stage:Stage II, alive, 56 days	546.2
TCGA-CR-7389-01A	0 years, male, black or african american, stage:'--, alive, 392 days	540.2
TCGA-BA-A4IH-01A	0 years, male, white, stage:'--, alive, 622 days	538.6
TCGA-CV-6937-01A	0 years, male, white, stage:Stage II, dead, 624 days	537.6
TCGA-CQ-5325-01A	0 years, male, white, stage:Stage I, dead, 654 days	537.1
TCGA-CQ-5324-01A	0 years, male, white, stage:Stage III, alive, 1593 days	528.7
TCGA-BA-A6DD-01A	0 years, male, black or african american, stage:Stage IVA, dead, 173 days	521.7
TCGA-CV-7183-01A	0 years, male, white, stage:Stage II, alive, 3981 days	504.9
TCGA-P3-A5Q6-01A	0 years, male, white, stage:Stage IVA, dead, 480 days	497.1
TCGA-F7-7848-01A	0 years, male, white, stage:Stage IVA, alive, 1131 days	491.3
TCGA-HD-8314-01A	0 years, male, white, stage:Stage III, alive, 670 days	491.2
TCGA-RS-A6TO-01A	0 years, female, white, stage:Stage IVA, dead, 387 days	487.3
TCGA-CV-6939-01A	0 years, male, white, stage:Stage IVA, dead, 666 days	483.7
TCGA-CQ-7071-01A	0 years, female, white, stage:Stage III, alive, 1311 days	481.5
TCGA-CV-A6JD-01A	0 years, female, white, stage:'--, dead, 182 days	481.2
TCGA-BB-4223-01A	0 years, male, white, stage:Stage IVA, alive, 3221 days	480.1
TCGA-CV-6942-01A	0 years, female, white, stage:Stage II, alive, 4282 days	477.7
TCGA-MT-A51X-01A	0 years, male, white, stage:Stage IVA, alive, 242 days	474.7
TCGA-CV-A45V-01A	0 years, female, white, stage:Stage IVA, dead, 32 days	474.0
TCGA-CQ-5326-01A	0 years, male, white, stage:Stage IVA, dead, 89 days	473.8
TCGA-CR-6482-01A	0 years, male, black or african american, stage:'--, alive, 345 days	466.5
TCGA-D6-6823-01A	0 years, male, white, stage:Stage II, alive, 701 days	450.8
TCGA-CV-5430-01A	0 years, male, white, stage:Stage IVA, alive, 4241 days	450.2
TCGA-BA-5153-01A	0 years, male, white, stage:'--, dead, 1762 days	449.2
TCGA-CR-6481-01A	0 years, male, white, stage:'--, alive, 311 days	447.7
TCGA-UF-A71B-01A	0 years, male, white, stage:Stage IVA, alive, 1506 days	446.5
TCGA-QK-A652-01A	0 years, male, white, stage:Stage III, alive, 645 days	441.9
TCGA-CV-7248-01A	0 years, female, black or african american, stage:Stage IVA, dead, 521 days	438.5
TCGA-QK-A8ZB-01A	0 years, male, black or african american, stage:Stage IVA, alive, 542 days	438.3
TCGA-CV-7247-01A	0 years, male, white, stage:Stage III, dead, 577 days	437.9
TCGA-P3-A6SX-01A	0 years, male, white, stage:Stage III, dead, 1430 days	432.0
TCGA-CN-6010-01A	0 years, male, white, stage:Stage IVA, alive, 1523 days	430.6
TCGA-P3-A6T7-01A	0 years, male, white, stage:Stage IVA, dead, 487 days	424.6
TCGA-CQ-A4CH-01A	0 years, male, asian, stage:Stage II, dead, 379 days	422.3
TCGA-BB-A5HZ-01A	0 years, male, white, stage:Stage IVA, alive, 827 days	416.9
TCGA-CN-6021-01A	0 years, female, white, stage:'--, dead, 276 days	416.0
TCGA-CN-6011-01A	0 years, male, white, stage:Stage IVA, alive, 933 days	415.6
TCGA-CV-6962-01A	0 years, male, white, stage:Stage IVA, dead, 126 days	414.0
TCGA-CV-7423-01A	0 years, male, white, stage:Stage II, dead, 3059 days	409.4
TCGA-CR-6491-01A	0 years, male, black or african american, stage:Stage IVA, alive, 693 days	401.4
TCGA-BA-5558-01A	0 years, male, white, stage:'--, alive, 1995 days	395.2
TCGA-H7-A6C4-01A	0 years, female, white, stage:Stage IVA, dead, 414 days	394.7
TCGA-CR-6478-01A	0 years, female, white, stage:'--, dead, 183 days	392.5
TCGA-CV-A461-01A	0 years, male, white, stage:'--, dead, 2064 days	388.5
TCGA-HD-A633-01A	0 years, male, white, stage:Stage IVA, alive, 421 days	374.1
TCGA-CN-4730-01A	0 years, male, white, stage:Stage IVA, alive, 817 days	373.8
TCGA-CQ-5331-01A	0 years, female, white, stage:'--, alive, 1399 days	372.0
TCGA-CN-5360-01A	0 years, male, white, stage:Stage IVA, alive, 2169 days	369.2
TCGA-BA-5556-01A	0 years, female, white, stage:Stage II, alive, 725 days	369.1
TCGA-CN-4741-01A	0 years, male, white, stage:Stage IVA, alive, 2239 days	362.6
TCGA-CN-6012-01A	0 years, male, white, stage:Stage IVA, alive, 1460 days	361.7
TCGA-F7-A61S-01A	0 years, male, white, stage:Stage III, alive, 576 days	361.0
TCGA-P3-A6T2-01A	0 years, male, white, stage:Stage IVA, alive, 2298 days	355.9
TCGA-IQ-A61H-01A	0 years, male, white, stage:Stage II, alive, 1138 days	352.1
TCGA-BA-A6DB-01A	0 years, female, white, stage:Stage I, alive, 216 days	349.1
TCGA-CV-7434-01A	0 years, male, white, stage:Stage IVA, dead, 218 days	348.8
TCGA-QK-A6IF-01A	0 years, male, white, stage:'--, alive, 704 days	344.1
TCGA-CV-6936-01A	0 years, male, white, stage:Stage IVA, dead, 166 days	343.0
TCGA-D6-A6EO-01A	0 years, male, white, stage:Stage IVA, alive, 759 days	342.0
TCGA-CQ-6220-01A	0 years, male, white, stage:Stage III, dead, 985 days	333.8
TCGA-CR-5249-01A	0 years, female, white, stage:Stage II, alive, 1152 days	330.8
TCGA-CR-6473-01A	0 years, male, white, stage:'--, alive, 1125 days	330.3
TCGA-CV-7089-01A	0 years, male, white, stage:Stage IVA, dead, 1972 days	330.1
TCGA-CR-7374-01A	0 years, female, white, stage:'--, alive, 30 days	327.1
TCGA-CV-5966-01A	0 years, female, white, stage:Stage IVA, dead, 545 days	326.7
TCGA-D6-6517-01A	0 years, male, white, stage:Stage III, alive, 292 days	326.5
TCGA-P3-A5QE-01A	0 years, male, white, stage:Stage III, alive, 1559 days	322.9
TCGA-F7-A50J-01A	0 years, female, white, stage:Stage III, alive, 947 days	322.2
TCGA-CV-7428-01A	0 years, male, white, stage:Stage IVA, dead, 1671 days	321.8
TCGA-BA-4076-01A	0 years, male, white, stage:'--, dead, 415 days	319.6
TCGA-UF-A7JC-01A	0 years, male, white, stage:Stage IVA, dead, 546 days	319.0
TCGA-CR-6487-01A	0 years, male, white, stage:Stage I, alive, 234 days	317.8
TCGA-CQ-5323-01A	0 years, male, white, stage:Stage I, alive, 1466 days	317.8
TCGA-CN-6013-01A	0 years, male, white, stage:Stage IVA, dead, 727 days	316.7
TCGA-BA-A6DE-01A	0 years, female, white, stage:Stage II, alive, 440 days	315.5
TCGA-D6-A4Z9-01A	0 years, male, white, stage:Stage IVA, alive, 539 days	315.4
TCGA-T2-A6X0-01A	0 years, male, white, stage:'--, alive, 216 days	314.8
TCGA-CR-7368-01A	0 years, male, white, stage:Stage IVA, alive, 1245 days	313.0
TCGA-HD-A6HZ-01A	0 years, female, white, stage:Stage III, alive, 111 days	310.6
TCGA-CQ-7063-01A	0 years, female, white, stage:Stage I, alive, 2133 days	310.2
TCGA-CN-5367-01A	0 years, female, white, stage:Stage IVA, dead, 352 days	309.9
TCGA-CN-6988-01A	0 years, male, white, stage:Stage IVA, alive, 318 days	308.3
TCGA-BB-4225-01A	0 years, male, white, stage:'--, alive, 146 days	307.1
TCGA-QK-A64Z-01A	0 years, female, white, stage:Stage IVA, dead, 641 days	306.8
TCGA-HD-7832-01A	0 years, male, white, stage:Stage IVA, alive, 836 days	306.3
TCGA-BB-A5HY-01A	0 years, male, white, stage:Stage IVA, dead, 321 days	303.3
TCGA-CN-A63W-01A	0 years, female, white, stage:Stage IVA, dead, 377 days	296.2
TCGA-CV-A45Z-01A	0 years, male, white, stage:'--, dead, 1466 days	289.4
TCGA-D6-6516-01A	0 years, male, white, stage:Stage I, alive, 773 days	284.5
TCGA-CX-A4AQ-01A	0 years, male, white, stage:Stage IVA, alive, 1555 days	283.2
TCGA-CV-6951-01A	0 years, male, white, stage:Stage IVA, dead, 915 days	282.9
TCGA-P3-A6T4-01A	0 years, male, white, stage:Stage IVA, dead, 62 days	274.7
TCGA-CV-7101-01A	0 years, male, white, stage:Stage II, dead, 160 days	271.4
TCGA-CV-5432-01A	0 years, male, white, stage:Stage III, alive, 3930 days	270.3
TCGA-BA-5152-01A	0 years, male, white, stage:Stage IVA, alive, 1288 days	269.9
TCGA-P3-A6T0-01A	0 years, female, white, stage:Stage IVA, alive, 578 days	266.8
TCGA-CR-6480-01A	0 years, male, white, stage:'--, alive, 362 days	261.8
TCGA-CN-A49B-01A	0 years, male, white, stage:Stage III, alive, 904 days	259.2
TCGA-CV-6003-01A	0 years, female, white, stage:Stage III, alive, 1665 days	257.2
TCGA-CN-4739-01A	0 years, male, white, stage:Stage IVA, dead, 1394 days	255.6
TCGA-P3-A6T5-01A	0 years, female, white, stage:Stage IVA, dead, 882 days	255.6
TCGA-CV-7253-01A	0 years, male, black or african american, stage:Stage IVA, dead, 361 days	255.2
TCGA-F7-A50I-01A	0 years, male, white, stage:Stage IVA, alive, 92 days	252.3
TCGA-D6-A74Q-01A	0 years, male, white, stage:Stage IVA, alive, 710 days	251.5
TCGA-BB-4217-01A	0 years, male, black or african american, stage:Stage IVA, alive, 187 days	250.6
TCGA-CN-4738-01A	0 years, male, white, stage:Stage IVA, dead, 436 days	248.5
TCGA-IQ-A6SG-01A	0 years, female, white, stage:Stage III, alive, 579 days	244.5
TCGA-CV-7430-01A	0 years, male, white, stage:Stage IVA, dead, 495 days	241.6
TCGA-CN-6995-01A	0 years, male, white, stage:Stage IVA, dead, 112 days	239.3
TCGA-BA-A6DI-01A	0 years, male, black or african american, stage:'--, dead, 336 days	233.7
TCGA-QK-A8Z7-01A	0 years, male, black or african american, stage:Stage IVA, alive, 392 days	231.4
TCGA-CV-7418-01A	0 years, male, black or african american, stage:Stage IVA, dead, 789 days	228.2
TCGA-CR-7404-01A	0 years, male, white, stage:'--, alive, 1472 days	227.7
TCGA-F7-A623-01A	0 years, male, white, stage:Stage IVA, alive, 616 days	227.0
TCGA-CR-7373-01A	0 years, male, white, stage:Stage IVA, alive, 889 days	226.9
TCGA-CN-A642-01A	0 years, male, white, stage:Stage IVB, dead, 82 days	226.4
TCGA-CV-A6JT-01A	0 years, male, white, stage:Stage II, alive, 852 days	223.8
TCGA-CV-7242-01A	0 years, female, white, stage:Stage II, alive, 1095 days	222.7
TCGA-UP-A6WW-01A	0 years, male, white, stage:'--, alive, 518 days	222.2
TCGA-CR-7399-01A	0 years, female, white, stage:Stage IVA, alive, 181 days	220.2
TCGA-CN-6023-01A	0 years, male, white, stage:Stage IVA, alive, 1584 days	218.0
TCGA-CN-A499-01A	0 years, female, white, stage:Stage II, alive, 717 days	216.1
TCGA-MT-A67F-01A	0 years, female, white, stage:Stage IVA, alive, 384 days	213.9
TCGA-CR-6467-01A	0 years, male, white, stage:Stage III, alive, 1777 days	211.0
TCGA-F7-A50G-01A	0 years, male, white, stage:Stage III, alive, 616 days	207.9
TCGA-UF-A7JO-01A	0 years, female, white, stage:Stage IVA, dead, 631 days	206.0
TCGA-QK-A8Z8-01A	0 years, female, black or african american, stage:Stage IVC, dead, 171 days	204.5
TCGA-CV-7099-01A	0 years, female, white, stage:Stage II, dead, 243 days	204.5
TCGA-BA-A6DL-01A	0 years, male, white, stage:'--, alive, 623 days	203.6
TCGA-CN-A63U-01A	0 years, male, white, stage:Stage IVA, alive, 964 days	202.2
TCGA-QK-A6VC-01A	0 years, female, black or african american, stage:Stage IVA, alive, 600 days	201.7
TCGA-UF-A7JT-01A	0 years, female, white, stage:Stage IVA, dead, 993 days	201.6
TCGA-CV-7425-01A	0 years, female, white, stage:Stage III, dead, 1718 days	199.2
TCGA-CV-5443-01A	0 years, male, black or african american, stage:Stage III, alive, 2784 days	195.7
TCGA-CQ-5327-01A	0 years, female, asian, stage:Stage IVA, alive, 1660 days	195.6
TCGA-CV-5977-01A	0 years, male, white, stage:Stage IVA, alive, 1840 days	194.8
TCGA-CV-6948-01A	0 years, female, white, stage:Stage IVB, dead, 1289 days	185.0
TCGA-CV-7427-01A	0 years, female, white, stage:Stage II, dead, 4760 days	184.8
TCGA-KU-A66S-01A	0 years, female, white, stage:Stage III, dead, 406 days	183.9
TCGA-F7-A620-01A	0 years, male, white, stage:Stage III, alive, 543 days	183.8
TCGA-BB-4227-01A	0 years, male, white, stage:Stage IVA, alive, 134 days	180.5
TCGA-UF-A719-01A	0 years, male, stage:Stage II, alive, 1663 days	178.9
TCGA-CR-6492-01A	0 years, male, white, stage:Stage III, alive, 479 days	175.1
TCGA-IQ-A6SH-01A	0 years, male, black or african american, stage:Stage III, alive, 471 days	174.8
TCGA-P3-A6T3-01A	0 years, male, white, stage:Stage IVA, dead, 577 days	170.1
TCGA-BA-A6DJ-01A	0 years, male, asian, stage:Stage IVA, dead, 407 days	169.7
TCGA-CV-7432-01A	0 years, male, white, stage:Stage II, dead, 2570 days	168.9
TCGA-CV-7437-01A	0 years, male, stage:Stage II, dead, 506 days	168.2
TCGA-CN-A6V6-01A	0 years, male, white, stage:Stage IVA, alive, 635 days	167.6
TCGA-HL-7533-01A	0 years, male, white, stage:'--, alive, 1057 days	167.1
TCGA-C9-A480-01A	0 years, female, asian, stage:Stage III, alive, 386 days	162.7
TCGA-CQ-5333-01A	0 years, male, white, stage:Stage II, dead, 341 days	162.1
TCGA-T3-A92N-01A	0 years, male, black or african american, stage:Stage IVA, dead, 95 days	161.8
TCGA-CQ-A4CD-01A	0 years, male, white, stage:Stage IVA, alive, 1022 days	160.0
TCGA-CN-A641-01A	0 years, male, white, stage:Stage IVA, alive, 367 days	158.5
TCGA-UF-A7JK-01A	0 years, male, stage:Stage IVA, dead, 424 days	156.7
TCGA-MT-A51W-01A	0 years, female, white, stage:Stage I, alive, 437 days	155.5
TCGA-CX-7086-01A	0 years, male, black or african american, stage:Stage III, alive, 573 days	154.1
TCGA-BA-7269-01A	0 years, male, white, stage:Stage III, alive, 1273 days	153.0
TCGA-CV-A45W-01A	0 years, male, white, stage:Stage II, dead, 1398 days	150.8
TCGA-CV-A465-01A	0 years, male, white, stage:Stage III, dead, 215 days	150.8
TCGA-CN-A6V3-01A	0 years, male, white, stage:Stage IVA, alive, 742 days	150.4
TCGA-HD-7229-01A	0 years, male, white, stage:Stage IVA, alive, 1027 days	150.3
TCGA-CV-5439-01A	0 years, male, white, stage:Stage IVA, dead, 546 days	144.1
TCGA-DQ-7591-01A	0 years, male, white, stage:'--, alive, 622 days	143.7
TCGA-D6-A4ZB-01A	0 years, male, white, stage:Stage III, alive, 376 days	141.8
TCGA-CV-5440-01A	0 years, male, white, stage:Stage IVA, alive, 3270 days	141.1
TCGA-CR-7385-01A	0 years, male, white, stage:'--, alive, 997 days	140.6
TCGA-CV-6945-01A	0 years, male, white, stage:Stage IVA, dead, 366 days	140.4
TCGA-CV-A45U-01A	0 years, male, white, stage:Stage IVA, dead, 1079 days	135.2
TCGA-CQ-7065-01A	0 years, male, asian, stage:Stage II, alive, 1628 days	134.6
TCGA-F7-A61W-01A	0 years, male, asian, stage:Stage IVA, alive, 14 days	132.8
TCGA-KU-A6H8-01A	0 years, male, white, stage:Stage IVA, dead, 327 days	131.7
TCGA-D6-A6EQ-01A	0 years, male, white, stage:Stage IVA, alive, 368 days	130.1
TCGA-HD-8634-01A	0 years, female, white, stage:Stage I, dead, 385 days	129.9
TCGA-UF-A71D-01A	0 years, female, white, stage:Stage IVA, alive, 1461 days	129.8
TCGA-CQ-6222-01A	0 years, male, white, stage:Stage IVA, alive, 2016 days	126.4
TCGA-TN-A7HJ-01A	0 years, male, white, stage:Stage IVA, alive, 403 days	122.4
TCGA-CQ-6223-01A	0 years, male, white, stage:Stage II, alive, 1428 days	121.6
TCGA-P3-A6SW-01A	0 years, male, white, stage:Stage IVB, alive, 1120 days	121.5
TCGA-CV-A45T-01A	0 years, female, white, stage:'--, dead, 4856 days	120.5
TCGA-C9-A47Z-01A	0 years, female, asian, stage:Stage III, dead, 191 days	116.3
TCGA-IQ-7632-01A	0 years, female, white, stage:Stage IVA, alive, 441 days	116.0
TCGA-CV-7407-01A	0 years, female, white, stage:Stage II, dead, 1081 days	116.0
TCGA-UF-A71E-01A	0 years, male, white, stage:Stage IVA, dead, 1504 days	114.1
TCGA-CV-7180-01A	0 years, male, white, stage:Stage II, dead, 327 days	112.9
TCGA-CN-A498-01A	0 years, female, white, stage:Stage III, dead, 773 days	111.3
TCGA-BA-6870-01A	0 years, female, black or african american, stage:'--, dead, 451 days	111.0
TCGA-D6-A6EP-01A	0 years, male, white, stage:Stage III, alive, 424 days	109.8
TCGA-BA-6869-01A	0 years, male, white, stage:Stage III, alive, 644 days	107.9
TCGA-CR-5248-01A	0 years, male, white, stage:'--, alive, 1663 days	106.1
TCGA-CV-A45P-01A	0 years, female, white, stage:Stage I, alive, 639 days	104.4
TCGA-CN-5365-01A	0 years, male, white, stage:Stage IVB, dead, 351 days	103.7
TCGA-BB-8601-01A	0 years, male, black or african american, stage:Stage III, alive, 624 days	102.9
TCGA-CV-A6JY-01A	0 years, male, white, stage:Stage IVA, alive, 646 days	102.4
TCGA-CQ-A4CE-01A	0 years, female, stage:Stage II, alive, 897 days	101.5
TCGA-CV-A463-01A	0 years, female, white, stage:Stage IVA, dead, 23 days	97.6
TCGA-CQ-7068-01A	0 years, female, white, stage:Stage II, alive, 1309 days	97.0
TCGA-KU-A66T-01A	0 years, female, white, stage:Stage IVA, alive, 552 days	96.9
TCGA-CN-5374-01A	0 years, female, white, stage:Stage IVA, dead, 1732 days	95.7
TCGA-QK-A6IH-01A	0 years, female, white, stage:Stage IVB, alive, 653 days	93.6
TCGA-QK-A8ZA-01A	0 years, male, black or african american, stage:'--, dead, 371 days	93.6
TCGA-CV-A6JU-01A	0 years, female, white, stage:Stage IVB, alive, 110 days	89.4
TCGA-F7-A61V-01A	0 years, male, white, stage:Stage II, alive, 759 days	88.9
TCGA-H7-7774-01A	0 years, female, white, stage:Stage IVA, alive, 407 days	86.7
TCGA-MT-A7BN-01A	0 years, male, white, stage:Stage IVA, alive, 469 days	86.1
TCGA-CV-6953-01A	0 years, female, white, stage:Stage III, dead, 1641 days	85.4
TCGA-MZ-A5BI-01A	0 years, male, white, stage:'--, dead, 217 days	85.0
TCGA-CN-6998-01A	0 years, male, white, stage:Stage IVA, dead, 357 days	84.9
TCGA-CV-6938-01A	0 years, male, white, stage:Stage II, dead, 144 days	84.9
TCGA-CV-A45X-01A	0 years, male, white, stage:Stage IVA, dead, 198 days	84.3
TCGA-T2-A6WX-01A	0 years, female, white, stage:'--, dead, 209 days	83.1
TCGA-CQ-6225-01A	0 years, male, white, stage:Stage III, dead, 403 days	82.2
TCGA-BB-A6UM-01A	0 years, male, white, stage:Stage III, alive, 393 days	82.2
TCGA-HD-A634-01A	0 years, male, white, stage:Stage IVA, dead, 130 days	81.7
TCGA-QK-AA3J-01A	0 years, male, black or african american, stage:Stage I, alive, 466 days	79.5
TCGA-QK-A6IG-01A	0 years, male, white, stage:Stage III, dead, 222 days	76.0
TCGA-BA-A4IG-01A	0 years, male, white, stage:'--, alive, 855 days	75.5
TCGA-CN-A49C-01A	0 years, male, white, stage:'--, alive, 645 days	74.8
TCGA-P3-A6T6-01A	0 years, male, white, stage:Stage IVA, dead, 395 days	72.7
TCGA-CV-A6K2-01A	0 years, male, white, stage:Stage IVA, dead, 317 days	70.1
TCGA-P3-A5QF-01A	0 years, male, white, stage:Stage IVA, dead, 330 days	66.4
TCGA-CV-A6JE-01A	0 years, male, white, stage:'--, alive, 1075 days	64.0
TCGA-CV-A45O-01A	0 years, male, white, stage:'--, alive, 851 days	63.4
TCGA-QK-A6V9-01A	0 years, male, white, stage:Stage II, alive, 833 days	62.4
TCGA-BA-A6D8-01A	0 years, male, black or african american, stage:Stage IVA, alive, 850 days	60.9
TCGA-MZ-A6I9-01A	0 years, male, white, stage:'--, dead, 489 days	60.7
TCGA-KU-A6H7-01A	0 years, female, white, stage:Stage IVA, alive, 586 days	53.2
TCGA-BB-4224-01A	0 years, male, white, stage:Stage IVA, alive, 278 days	52.9
TCGA-P3-A5Q5-01A	0 years, male, white, stage:Stage IVA, alive, 910 days	50.5
TCGA-CV-6433-01A	0 years, male, white, stage:Stage II, alive, 641 days	48.1
TCGA-TN-A7HI-01A	0 years, male, white, stage:Stage IVA, alive, 412 days	42.2
TCGA-DQ-7588-01A	0 years, male, white, stage:'--, dead, 427 days	41.5
TCGA-CV-A6JN-01A	0 years, male, white, stage:'--, alive, 906 days	39.2
TCGA-D6-A6EM-01A	0 years, female, white, stage:Stage III, alive, 232 days	38.4
TCGA-CN-A6V7-01A	0 years, male, white, stage:Stage IVA, alive, 594 days	37.6
TCGA-T2-A6WZ-01A	0 years, male, white, stage:'--, dead, 484 days	36.9
TCGA-F7-A624-01A	0 years, male, white, stage:Stage II, alive, 378 days	36.4
TCGA-CV-6955-01A	0 years, female, white, stage:Stage II, dead, 334 days	36.2
TCGA-CV-A6K1-01A	0 years, male, white, stage:Stage IVA, alive, 685 days	35.1
TCGA-RS-A6TP-01A	0 years, male, white, stage:Stage II, alive, 516 days	33.3
TCGA-CV-A6JM-01A	0 years, male, white, stage:'--, dead, 194 days	31.8
TCGA-CN-A6UY-01A	0 years, male, white, stage:Stage IVA, alive, 713 days	31.7
TCGA-CV-5442-01A	0 years, female, white, stage:Stage IVA, alive, 2327 days	29.1
TCGA-MT-A67A-01A	0 years, female, white, stage:Stage I, alive, 914 days	28.8
TCGA-F7-A622-01A	0 years, male, white, stage:Stage III, dead, 359 days	26.9
TCGA-UF-A7JF-01A	0 years, male, white, stage:Stage IVA, alive, 1686 days	26.9
TCGA-IQ-A61I-01A	0 years, male, black or african american, stage:Stage IVA, dead, 2 days	24.6
TCGA-CV-6441-01A	0 years, male, white, stage:Stage III, dead, 292 days	24.2
TCGA-D6-A6EN-01A	0 years, male, white, stage:Stage III, alive, 687 days	22.5
TCGA-MZ-A7D7-01A	0 years, male, white, stage:Stage IVA, alive, 547 days	22.3
TCGA-UF-A7JS-01A	0 years, male, white, stage:Stage IVA, dead, 680 days	22.3
TCGA-TN-A7HL-01A	0 years, male, white, stage:Stage IVA, alive, 619 days	22.0
TCGA-CV-6436-01A	0 years, male, white, stage:Stage IVA, alive, 1899 days	21.9
TCGA-BA-A6DA-01A	0 years, female, white, stage:Stage IVA, alive, 351 days	19.1
TCGA-HD-A6I0-01A	0 years, male, white, stage:Stage IVA, alive, 210 days	18.9
TCGA-D6-A6EK-01A	0 years, male, white, stage:Stage III, alive, 875 days	17.1
TCGA-IQ-A61G-01A	0 years, male, white, stage:Stage IVA, alive, 360 days	15.8
TCGA-QK-A6II-01A	0 years, male, white, stage:Stage IVA, dead, 284 days	12.9
TCGA-D6-A6ES-01A	0 years, male, white, stage:Stage IVA, alive, 389 days	10.0
TCGA-QK-A6IJ-01A	0 years, male, white, stage:Stage III, alive, 387 days	9.9
TCGA-CV-A45Q-01A	0 years, female, white, stage:'--, dead, 5152 days	7.4
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HEAD AND NECK SQUAMOUS CELL CARCINOMA - Protein relative expression (CPTAC)

Number of samples

183

Samples

Sample ID	Sample type	nRPX
CPT0245350003	Tumor	1.3
CPT0169890003	Tumor	1.3
CPT0163480003	Tumor	1.2
CPT0169730003	Tumor	1.1
CPT0163340003	Tumor	1.1
CPT0094420004	Tumor	1.0
CPT0194250003	Tumor	1.0
CPT0245010003	Tumor	0.9
CPT0246620003	Tumor	0.9
CPT0162990004	Tumor	0.9
CPT0094560004	Tumor	0.8
CPT0222360003	Tumor	0.8
CPT0199710003	Normal	0.8
CPT0245550003	Tumor	0.8
CPT0246590003	Tumor	0.8
CPT0163160003	Tumor	0.7
CPT0095040003	Tumor	0.7
CPT0245060004	Tumor	0.7
CPT0194960003	Tumor	0.6
CPT0245500003	Tumor	0.6
CPT0013210004	Tumor	0.6
CPT0244890004	Tumor	0.6
CPT0094350004	Tumor	0.6
CPT0008930003	Tumor	0.6
CPT0245130003	Tumor	0.6
CPT0088060004	Tumor	0.5
CPT0194420003	Tumor	0.5
CPT0123260003	Tumor	0.5
CPT0199820003	Tumor	0.5
CPT0162940003	Tumor	0.5
CPT0245140003	Normal	0.5
CPT0226340003	Tumor	0.5
CPT0024810003	Tumor	0.5
CPT0245630003	Tumor	0.5
CPT0235460003	Tumor	0.4
CPT0169640003	Tumor	0.4
CPT0094280004	Tumor	0.4
CPT0207870004	Tumor	0.4
CPT0237620004	Tumor	0.4
CPT0011130005	Tumor	0.3
CPT0088410003	Tumor	0.3
CPT0245730003	Tumor	0.3
CPT0196210003	Tumor	0.3
CPT0123180003	Tumor	0.3
CPT0199700003	Tumor	0.3
CPT0223970003	Tumor	0.3
CPT0226440003	Tumor	0.3
CPT0196040003	Tumor	0.3
CPT0237480004	Tumor	0.2
CPT0194800003	Normal	0.2
CPT0237130004	Tumor	0.2
CPT0184530003	Tumor	0.2
CPT0261520003	Tumor	0.2
CPT0195680003	Tumor	0.2
CPT0011290003	Tumor	0.2
CPT0243090003	Tumor	0.2
CPT0248520003	Tumor	0.2
CPT0127050003	Tumor	0.2
CPT0246670003	Tumor	0.1
CPT0226250004	Tumor	0.1
CPT0013130003	Tumor	0.1
CPT0163650003	Tumor	0.1
CPT0013000004	Tumor	0.1
CPT0163790003	Tumor	0.1
CPT0169920003	Normal	0.1
CPT0246540003	Tumor	0.1
CPT0177710003	Tumor	0.1
CPT0177200003	Tumor	0.1
CPT0248330003	Tumor	0.0
CPT0226030003	Tumor	0.0
CPT0163090003	Tumor	0.0
CPT0245450003	Tumor	0.0
CPT0245600003	Tumor	0.0
CPT0087990003	Tumor	0.0
CPT0162890003	Tumor	0.0
CPT0245400003	Tumor	0.0
CPT0013250003	Normal	0.0
CPT0201830004	Tumor	0.0
CPT0199880003	Tumor	0.0
CPT0163530003	Tumor	-0.1
CPT0195880003	Normal	-0.1
CPT0013430003	Tumor	-0.1
CPT0013030003	Normal	-0.1
CPT0194260003	Normal	-0.1
CPT0245300003	Tumor	-0.1
CPT0177390003	Tumor	-0.1
CPT0241980004	Tumor	-0.1
CPT0220610003	Tumor	-0.1
CPT0013460003	Normal	-0.2
CPT0190850003	Tumor	-0.2
CPT0223450003	Tumor	-0.2
CPT0236620003	Tumor	-0.2
CPT0235910003	Tumor	-0.2
CPT0226130003	Tumor	-0.2
CPT0163240003	Tumor	-0.2
CPT0245230004	Tumor	-0.2
CPT0163840003	Tumor	-0.3
CPT0220620003	Normal	-0.3
CPT0087820003	Tumor	-0.3
CPT0008520008	Tumor	-0.3
CPT0237150003	Normal	-0.3
CPT0195700003	Normal	-0.3
CPT0123280003	Normal	-0.3
CPT0163490003	Normal	-0.3
CPT0242000004	Normal	-0.3
CPT0084630009	Tumor	-0.3
CPT0245180003	Tumor	-0.3
CPT0176770003	Tumor	-0.4
CPT0195860003	Tumor	-0.4
C3N-04279-05	Normal	-0.4
CPT0163430003	Normal	-0.4
CPT0011320003	Normal	-0.4
CPT0196060003	Normal	-0.4
CPT0237500003	Normal	-0.4
CPT0235470002	Normal	-0.4
CPT0008960003	Normal	-0.4
CPT0245680003	Tumor	-0.4
CPT0223460003	Normal	-0.4
CPT0190860003	Normal	-0.4
CPT0163600003	Tumor	-0.5
CPT0250310003	Tumor	-0.5
C3N-01859-04	Normal	-0.5
CPT0226450003	Normal	-0.5
CPT0226400003	Normal	-0.5
CPT0094490004	Tumor	-0.5
CPT0199890003	Normal	-0.6
C3N-01758-04	Normal	-0.6
CPT0236870003	Normal	-0.6
CPT0088080003	Normal	-0.6
CPT0245020003	Normal	-0.6
CPT0199830003	Normal	-0.6
CPT0008630003	Tumor	-0.6
CPT0226090003	Normal	-0.7
CPT0088010003	Normal	-0.7
CPT0226390003	Tumor	-0.7
CPT0163020003	Normal	-0.7
CPT0236850004	Tumor	-0.7
CPT0245560003	Normal	-0.7
C3N-04276-06	Normal	-0.8
CPT0163720003	Normal	-0.8
CPT0245190003	Normal	-0.8
CPT0084650004	Normal	-0.8
CPT0177220003	Normal	-0.8
CPT0256560003	Tumor	-0.8
CPT0163410003	Tumor	-0.8
CPT0088430003	Normal	-0.9
CPT0244940004	Tumor	-0.9
C3N-00857-05	Normal	-0.9
CPT0236640003	Normal	-0.9
CPT0245410003	Normal	-0.9
CPT0177010003	Tumor	-0.9
CPT0278700002	Normal	-0.9
CPT0229220002	Normal	-0.9
C3N-00295-05	Normal	-0.9
CPT0123190003	Normal	-0.9
CPT0163800003	Normal	-0.9
CPT0163740003	Tumor	-0.9
CPT0281470002	Normal	-0.9
CPT0222180003	Tumor	-1.0
C3N-04275-05	Normal	-1.0
C3N-02693-06	Normal	-1.0
CPT0226270003	Normal	-1.0
CPT0248350003	Normal	-1.0
CPT0163910003	Tumor	-1.1
CPT0201860004	Normal	-1.1
CPT0094580003	Normal	-1.1
CPT0163610003	Normal	-1.1
CPT0235920003	Normal	-1.1
CPT0163170003	Normal	-1.2
C3N-01620-05	Normal	-1.2
CPT0163860003	Normal	-1.2
CPT0222200003	Normal	-1.2
CPT0245460003	Normal	-1.2
CPT0237640003	Normal	-1.2
CPT0243140004	Normal	-1.3
CPT0226350003	Normal	-1.4
CPT0163250003	Normal	-1.4
CPT0194790003	Tumor	-1.4
CPT0169740004	Normal	-2.0
CPT0229230003	Normal	N/A
CPT0169750003	Normal	N/A
CPT0229210003	Tumor	N/A
CPT0229190003	Tumor	N/A
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HEAD AND NECK CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.	Antibody HPA002989	Antibody HPA003020	Antibody CAB002306
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Squamous cell carcinoma, NOS
Neoplasm, malignant, NOS
Adenocarcinoma, NOS
Squamous cell carcinoma, NOS Squamous cell carcinoma, metastatic, NOS