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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
214.2
nTPM
GTEx:
214.2
nTPM
FANTOM5:
79.7
Scaled Tags Per Million
Pig:
125.8
nTPM
Mouse:
168.2
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
214.2
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 214.2
Samples: 105
Max nTPM: 541.7
Min nTPM: 109.3
Std nTPM: 77.8
Median nTPM:
308_1
70 years, female
541.7
491_1
89 years, female
453.9
313_1
79 years, female
415.7
490_1
67 years, female
409.9
137_1
83 years, male
393.0
42_1
85 years, male
346.8
117_1
61 years, male
346.4
119_1
70 years, female
336.2
41_1
94 years, female
330.0
99_1
64 years, male
328.0
4_1
88 years, female
310.9
351_1
91 years, male
303.3
315_1
62 years, female
299.1
452_1
88 years, female
298.0
89_1
63 years, male
294.1
120_1
70 years, female
289.1
414_1
84 years, female
284.7
526_1
61 years, male
280.3
501_1
88 years, male
280.2
307_1
66 years, female
277.1
295_1
61 years, female
270.4
17_1
71 years, male
269.2
384_1
83 years, male
266.1
375_1
74 years, female
259.1
173_1
67 years, male
256.2
406_1
79 years, male
254.0
314_1
67 years, male
253.9
415_1
77 years, female
248.9
396_1
62 years, male
244.5
447_1
81 years, male
238.9
347_1
72 years, male
237.7
142_1
61 years, female
232.4
389_1
86 years, female
228.9
495_1
57 years, female
226.4
145_1
84 years, male
224.0
317_1
60 years, male
224.0
254_1
77 years, female
222.7
237_1
82 years, male
220.0
413_1
59 years, female
216.8
139_1
64 years, female
215.6
288_1
66 years, female
214.8
506_1
65 years, male
214.2
264_1
73 years, female
212.7
499_1
55 years, female
210.6
6_1
73 years, female
209.9
35_1
74 years, female
209.3
354_1
81 years, female
209.0
109_1
81 years, female
208.8
293_1
68 years, female
206.7
324_1
76 years, male
205.8
348_1
84 years, male
203.4
349_1
83 years, male
202.6
126_1
63 years, male
201.8
480_1
63 years, male
200.2
162_1
79 years, female
197.5
394_1
75 years, female
196.4
265_1
87 years, male
194.9
32_1
67 years, male
194.4
386_1
76 years, male
193.4
379_1
60 years, male
188.3
2_1
77 years, female
187.3
189_1
76 years, male
184.1
321_1
62 years, female
183.8
243_1
75 years, male
183.0
177_1
74 years, male
180.9
266_1
85 years, male
180.4
350_1
84 years, female
175.6
468_1
89 years, male
169.4
9_1
66 years, female
169.3
217_1
76 years, male
169.0
466_1
57 years, female
168.4
115_1
83 years, male
166.9
18_1
88 years, male
166.8
503_1
68 years, male
165.9
376_1
75 years, female
164.1
319_1
81 years, male
163.0
163_1
78 years, male
161.2
425_1
59 years, female
158.9
311_1
78 years, male
157.4
149_1
88 years, male
157.1
291_1
76 years, male
154.9
81_1
67 years, male
151.8
353_1
82 years, female
150.0
43_1
64 years, female
149.1
404_1
82 years, female
145.5
335_1
73 years, female
145.1
286_1
68 years, female
143.1
377_1
82 years, female
142.0
518_1
75 years, female
141.2
172_1
72 years, female
140.6
355_1
70 years, female
140.3
356_1
87 years, female
139.5
322_1
76 years, male
135.6
316_1
62 years, male
132.6
153_1
70 years, female
131.5
320_1
89 years, female
130.9
218_1
71 years, female
129.6
292_1
71 years, male
128.5
517_1
88 years, male
127.9
251_1
78 years, male
125.0
229_1
69 years, female
122.5
352_1
62 years, male
121.9
318_1
68 years, male
121.1
405_1
91 years, male
117.8
246_1
77 years, male
109.3
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.