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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
215.9
nTPM
HPA Brain:
304.7
nTPM
GTEx:
215.9
nTPM
FANTOM5:
1454.9
Scaled Tags Per Million
Pig:
871.9
nTPM
Mouse:
412.0
nTPM
Allen mouse:
5.4
Expression energy
HIPPOCAMPUS - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
304.7
Sample id
Sample description
nTPM
Hippocampus nTPM: 284.7
2529
Female, age 94, left hemisphere
317.5
1911
Female, age 85, right hemisphere
297.4
1898
Male, age 80, left hemisphere
295.0
2148
Female, age 91, left hemisphere
275.9
1855
Male, age 76, left hemisphere
261.3
2621
Female, age 67, right hemisphere
261.3
Dentate gyrus nTPM: 209.0
2246
Female, age 85, both hemispheres
293.6
2528
Male, age 74, both hemispheres
278.1
1927
Female, age 91, both hemispheres
256.0
2010
Male, age 76, both hemispheres
201.0
2531
Female, age 67, both hemispheres
126.3
2530
Female, age 94, left hemisphere
99.3
Entorhinal gyrus nTPM: 278.0
2117
Female, age 91, right hemisphere
423.4
1938
Female, age 85, left hemisphere
406.2
1787
Male, age 76, left hemisphere
279.7
2764
Male, age 80, right hemisphere
220.8
2686
Male, age 75, right hemisphere
213.4
2613
Female, age 94, left hemisphere
124.5
Hippocampus, CA1 nTPM: 255.1
2527
Male, age 74, both hemispheres
346.9
2082
Female, age 91, right hemisphere
258.6
1873
Female, age 85, both hemispheres
244.4
2045
Male, age 76, both hemispheres
221.8
2749
Male, age 80, left hemisphere
203.8
Hippocampus, CA2 nTPM: 236.3
2249
Male, age 74, both hemispheres
313.4
2113
Female, age 91, right hemisphere
291.4
1940
Female, age 85, left hemisphere
280.5
1892
Male, age 76, both hemispheres
190.3
1963
Male, age 80, left hemisphere
179.3
2437
Female, age 94, left hemisphere
163.1
Hippocampus, CA3 nTPM: 231.6
2436
Male, age 74, both hemispheres
344.1
1891
Female, age 85, both hemispheres
286.2
1867
Male, age 76, both hemispheres
245.1
2137
Male, age 80, left hemisphere
211.1
2861
Female, age 67, both hemispheres
155.6
2620
Female, age 94, left hemisphere
147.5
Parahippocampal cortex nTPM: 304.7
2250
Female, age 67, right hemisphere
459.4
1933
Female, age 85, both hemispheres
407.0
2692
Male, age 74, both hemispheres
316.9
2622
Female, age 67, right hemisphere
305.6
1990
Female, age 91, right hemisphere
293.7
2245
Female, age 91, both hemispheres
291.8
1850
Male, age 80, both hemispheres
280.5
2018
Male, age 76, both hemispheres
277.3
2693
Female, age 94, both hemispheres
251.1
2532
Female, age 72, left hemisphere
163.9
Perirhinal gyrus nTPM: 296.8
1841
Female, age 85, right hemisphere
349.9
1847
Female, age 91, left hemisphere
331.4
1794
Male, age 80, right hemisphere
308.5
2521
Female, age 94, right hemisphere
302.6
2848
Male, age 76, right hemisphere
191.4
Subiculum nTPM: 276.3
2619
Male, age 74, both hemispheres
372.6
2729
Female, age 91, right hemisphere
337.6
2438
Female, age 94, left hemisphere
263.7
1977
Female, age 85, both hemispheres
239.1
1901
Male, age 80, both hemispheres
225.8
2042
Male, age 76, both hemispheres
219.2
HIPPOCAMPAL FORMATION - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
215.9
GTEx sample id
Sample description
nTPM
Brain - Hippocampus Average nTPM: 215.9
Samples: 197
Max nTPM: 885.4
Min nTPM: 38.6
Std nTPM: 121.4
Median nTPM: 193.3
GTEX-1GMR8-0011-R1b-SM-CJI2O
50-59 years, female
885.4
GTEX-P44G-0011-R1A-SM-2I3FE
30-39 years, male
599.7
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
563.4
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
552.4
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
498.2
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
492.0
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
482.0
GTEX-1HT8W-0011-R1b-SM-CJI3V
30-39 years, male
461.5
GTEX-1CAV2-0011-R1a-SM-ARZML
40-49 years, female
455.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
454.5
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
447.5
GTEX-1LG7Y-0011-R1a-SM-EYYWV
50-59 years, male
442.7
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
436.6
GTEX-1F75W-0011-R1a-SM-ARU81
60-69 years, male
426.3
GTEX-1GF9V-0011-R1a-SM-CKZNQ
60-69 years, male
425.7
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
419.2
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y
40-49 years, male
413.7
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
388.5
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
386.6
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
371.9
GTEX-1H3VE-0011-R1a-SM-A9G1K
40-49 years, male
368.1
GTEX-1J8Q2-0011-R1a-SM-D4P2D
60-69 years, male
365.3
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
360.0
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
356.0
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
354.5
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
350.9
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
350.5
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
341.8
GTEX-1I1GQ-0011-R1a-SM-CY8GG
50-59 years, male
338.8
GTEX-1I1GV-0011-R1a-SM-CL559
60-69 years, male
326.1
GTEX-1J1OQ-0011-R1a-SM-A9G1Z
40-49 years, female
319.2
GTEX-1HGF4-0011-R1a-SM-CJI3S
60-69 years, male
318.9
GTEX-1A3MX-0011-R1b-SM-7P8PH
60-69 years, male
314.6
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
311.8
GTEX-1C64N-0011-R1b-SM-7P8Q7
50-59 years, male
310.4
GTEX-11EI6-0011-R1a-SM-DO93L
60-69 years, male
306.2
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
300.2
GTEX-1ICLZ-0011-R1b-SM-A9SM3
60-69 years, male
299.0
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
295.0
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
289.3
GTEX-11DXW-0011-R1a-SM-DNZZD
40-49 years, male
288.6
GTEX-11GS4-0011-R1a-SM-DO129
60-69 years, male
288.4
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
283.8
GTEX-15CHQ-0011-R1a-SM-COH27
60-69 years, male
282.6
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
282.3
GTEX-1B996-0011-R1b-SM-7P8PO
60-69 years, male
282.2
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
282.1
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
279.0
GTEX-1GN73-0011-R1a-SM-CKZNT
60-69 years, male
274.9
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
273.9
GTEX-1H1CY-0011-R1a-SM-CKZOZ
60-69 years, female
272.1
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
269.9
GTEX-11GSP-0011-R1a-SM-9QEJ3
60-69 years, female
268.8
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
265.6
GTEX-1B933-0011-R1b-SM-9QEGW
50-59 years, female
262.8
GTEX-1BAJH-0011-R1a-SM-7P8SV
70-79 years, male
260.2
GTEX-1IKK5-0011-R1b-SM-CE6SQ
60-69 years, male
259.9
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
259.4
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
259.1
GTEX-1IY9M-0011-R1a-SM-EXURZ
60-69 years, male
256.5
GTEX-1LB8K-0011-R1b-SM-EZ6MV
50-59 years, male
252.6
GTEX-11TUW-0011-R1a-SM-DO92S
60-69 years, male
248.8
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
246.0
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
245.1
GTEX-1GN1U-0011-R1a-SM-CJI25
50-59 years, female
242.6
GTEX-1C6VR-0011-R1a-SM-7MXUE
60-69 years, male
240.1
GTEX-1HSKV-0011-R1b-SM-CMKH7
60-69 years, male
239.5
GTEX-1A32A-0011-R1a-SM-7P8SQ
50-59 years, female
235.8
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
235.2
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
235.1
GTEX-1F6IF-0011-R1b-SM-9WG78
60-69 years, male
231.6
GTEX-1F48J-0011-R1a-SM-9QEIC
50-59 years, female
227.7
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
226.8
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
226.6
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
225.3
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
220.3
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
219.8
GTEX-1EKGG-0011-R1b-SM-9QEI1
60-69 years, male
219.3
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
217.6
GTEX-1H1ZS-0011-R1b-SM-A9G1E
70-79 years, male
216.4
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
215.8
GTEX-1B8L1-0011-R1a-SM-7P8SS
60-69 years, male
215.6
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
214.8
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
214.7
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
214.1
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
213.6
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
212.9
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
212.3
GTEX-1I1HK-0011-R1b-SM-CM2T7
60-69 years, male
211.4
GTEX-1IOXB-0011-R1a-SM-D4P27
50-59 years, male
205.9
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
205.3
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
204.4
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
203.1
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
201.6
GTEX-1CB4J-0011-R1a-SM-9WG64
60-69 years, male
200.4
GTEX-1F75A-0011-R1b-SM-CE6RA
50-59 years, male
198.9
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
194.5
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
194.0
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
193.3
GTEX-14PJM-0011-R1a-SM-CNPO3
50-59 years, female
192.4
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
190.2
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
186.9
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
185.9
GTEX-1EWIQ-0011-R1a-SM-9OSX7
70-79 years, female
185.0
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
182.2
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
178.5
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
178.5
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
172.4
GTEX-1GTWX-0011-R1a-SM-CE6RL
60-69 years, male
171.7
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
169.2
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
169.1
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
167.1
GTEX-1A8G6-0011-R1a-SM-7P8PC
60-69 years, male
165.8
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
164.2
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
163.4
GTEX-1E2YA-0011-R1b-SM-CJI29
50-59 years, male
163.4
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
162.6
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
161.8
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
161.4
GTEX-1IDJH-0011-R1b-SM-ARU6U
70-79 years, male
159.8
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
157.7
GTEX-N7MT-0011-R1a-SM-CNPO1
60-69 years, female
157.5
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
157.3
GTEX-1HSMO-0011-R1a-SM-CM2SV
60-69 years, male
154.5
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
153.4
GTEX-1C6VQ-0011-R1a-SM-7P8Q2
50-59 years, male
150.4
GTEX-1HBPI-0011-R1b-SM-A9SKF
50-59 years, male
149.5
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
148.7
GTEX-1EH9U-0011-R1b-SM-CJI2B
60-69 years, male
148.4
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
148.3
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
147.2
GTEX-1HR98-0011-R1a-SM-ARZLQ
60-69 years, male
144.9
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
143.9
GTEX-1GF9W-0011-R1a-SM-9QEIQ
60-69 years, male
143.9
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
142.7
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
142.1
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
140.9
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
140.6
GTEX-1EMGI-0011-R1b-SM-9OSWZ
60-69 years, male
139.2
GTEX-1H1DG-0011-R1b-SM-CKZP1
70-79 years, male
138.3
GTEX-15UF6-0011-R1a-SM-9QEGH
70-79 years, female
137.1
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
136.6
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
135.9
GTEX-17HII-0011-R1b-SM-7MGVW
50-59 years, male
132.8
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
132.7
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
131.7
GTEX-1CB4G-0011-R1b-SM-9QEHT
60-69 years, male
131.6
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
130.4
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
128.6
GTEX-1GN2E-0011-R1b-SM-CE6RJ
60-69 years, male
128.6
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
122.7
GTEX-X4EP-0011-R1A-SM-3P624
60-69 years, female
121.2
GTEX-1H3O1-0011-R1b-SM-CL554
60-69 years, male
118.8
GTEX-RNOR-0011-R1A-SM-CNNP5
50-59 years, female
118.2
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
117.9
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
117.5
GTEX-1F6I4-0011-R1a-SM-9OSWU
60-69 years, male
116.7
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
116.6
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
114.4
GTEX-1I1GS-0011-R1a-SM-CJI43
60-69 years, male
114.2
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
113.6
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
112.0
GTEX-16NPV-0011-R1b-SM-7MGVZ
50-59 years, female
111.9
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
109.4
GTEX-11WQC-0011-R1b-SM-DO932
60-69 years, male
109.2
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
108.8
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
107.0
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
106.1
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
105.3
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
104.4
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
104.4
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
104.2
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
103.7
GTEX-1AX9I-0011-R1b-SM-7RHG2
60-69 years, male
97.8
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
96.9
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
95.8
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
92.9
GTEX-1E1VI-0011-R1a-SM-ARZMM
50-59 years, male
92.8
GTEX-1B8SF-0011-R1b-SM-7P8Q8
60-69 years, male
90.5
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
89.1
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
88.3
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
87.7
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
84.7
GTEX-1H23P-0011-R1a-SM-ACKVC
60-69 years, male
82.8
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
78.6
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
78.5
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
76.2
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
75.8
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
70.8
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
70.4
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
70.2
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
69.2
GTEX-1H4P4-0011-R1b-SM-CL54V
50-59 years, male
65.4
GTEX-1EX96-0011-R1a-SM-CE6R5
50-59 years, male
53.0
GTEX-1H3NZ-0011-R1a-SM-CKZP5
60-69 years, male
51.5
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
47.5
GTEX-1GZHY-0011-R1a-SM-CE6RR
50-59 years, female
38.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
412.0
Mouse sample
Sample description
nTPM
Entorhinal cortex nTPM: 412.0
Samples: 4
Max nTPM: 440.6
Min nTPM: 370.7
Sample A
Male
430.5
Sample B
Male
370.7
Sample C
Female
440.6
Sample D
Female
406.0
Hippocampal formation nTPM: 361.7
Samples: 4
Max nTPM: 425.8
Min nTPM: 295.2
Sample A
Male
425.8
Sample B
Male
355.8
Sample C
Female
295.2
Sample D
Female
369.9
HIPPOCAMPAL FORMATION - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.