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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HMGN2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
67.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
250.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
167.3
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
165.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
158.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
140.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
137.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
133.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
124.0
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
122.6
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
122.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
122.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
120.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
118.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
116.5
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
107.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
102.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
100.9
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
99.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
98.6
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
95.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
93.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
92.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
90.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
89.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
86.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
79.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
79.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
77.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
75.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
75.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
73.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
73.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
68.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
68.4
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
68.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
67.7
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
65.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
65.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
63.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
62.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
56.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
55.7
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
11.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
8.4
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
7.8
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
5.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
5.4
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
5.4
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
5.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
4.8
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
3.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
3.3
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
0.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
0.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
0.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
0.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HMGN2 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
270.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
1307.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
763.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
618.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
564.4
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
510.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
494.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
489.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
484.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
479.9
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
478.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
477.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
470.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
464.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
456.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
453.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
445.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
441.4
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
440.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
440.1
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
436.9
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
432.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
422.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
419.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
419.7
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
416.9
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
416.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
414.7
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
412.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
408.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
405.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
404.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
402.6
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
402.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
400.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
400.4
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
400.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
399.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
399.0
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
397.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
395.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
394.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
394.0
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
393.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
392.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
389.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
387.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
387.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
386.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
383.9
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
383.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
383.0
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
382.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
381.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
381.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
381.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
378.3
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
376.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
375.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
372.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
372.6
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
372.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
372.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
370.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
369.3
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
368.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
368.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
367.3
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
366.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
366.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
365.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
364.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
364.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
363.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
362.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
361.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
361.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
361.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
361.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
359.2
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
359.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
358.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
358.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
358.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
356.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
353.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
353.4
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
352.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
351.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
351.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
350.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
349.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
349.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
348.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
347.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
344.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
342.7
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
340.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
337.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
337.6
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
337.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
336.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
336.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
336.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
335.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
334.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
334.3
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
334.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
334.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
334.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
333.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
333.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
333.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
332.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
330.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
330.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
329.0
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
328.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
328.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
327.8
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
327.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
326.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
326.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
326.9
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
325.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
324.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
324.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
323.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
322.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
322.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
322.6
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
322.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
322.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
322.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
321.9
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
320.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
320.8
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
320.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
319.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
319.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
318.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
318.2
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
318.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
316.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
316.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
316.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
315.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
314.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
314.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
313.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
313.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
312.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
312.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
312.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
311.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
310.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
310.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
310.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
309.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
309.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
309.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
309.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
309.3
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
309.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
308.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
308.6
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
307.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
307.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
307.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
307.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
306.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
306.2
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
305.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
305.8
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
305.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
305.6
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
305.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
305.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
305.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
305.2
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
304.9
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
304.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
304.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
303.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
303.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
303.0
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
302.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
301.2
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
301.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
300.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
299.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
299.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
299.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
298.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
298.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
297.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
297.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
297.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
297.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
296.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
295.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
294.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
293.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
293.3
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
292.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
292.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
292.6
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
291.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
291.9
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
291.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
291.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
291.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
291.5
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
291.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
291.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
291.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
290.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
290.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
290.1
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
290.0
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
290.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
289.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
289.5
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
289.5
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
289.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
287.4
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
286.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
286.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
284.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
283.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
283.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
283.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
282.5
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
282.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
282.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
281.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
280.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
279.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
279.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
279.2
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
278.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
278.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
278.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
277.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
276.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
275.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
275.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
275.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
274.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
271.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
271.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
271.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
271.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
271.3
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
271.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
270.5
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
269.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
269.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
269.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
268.8
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
268.7
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
268.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
266.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
266.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
266.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
266.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
265.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
265.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
265.2
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
264.7
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
264.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
264.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
264.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
263.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
263.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
263.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
262.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
262.5
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
261.9
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
261.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
260.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
260.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
259.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
258.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
258.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
258.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
257.9
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
257.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
257.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
257.2
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
257.0
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
256.6
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
256.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
256.4
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
255.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
255.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
254.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
254.3
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
254.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
253.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
253.5
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
252.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
252.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
251.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
251.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
251.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
250.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
250.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
250.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
249.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
247.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
246.6
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
246.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
245.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
244.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
244.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
244.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
242.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
242.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
242.3
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
242.2
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
242.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
242.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
241.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
241.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
241.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
241.1
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
240.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
240.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
240.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
239.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
239.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
239.2
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
239.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
238.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
237.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
237.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
237.4
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
237.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
237.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
235.6
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
234.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
234.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
232.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
232.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
232.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
232.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
231.9
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
231.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
231.4
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
230.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
230.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
230.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
230.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
228.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
228.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
227.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
226.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
226.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
225.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
225.1
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
225.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
224.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
224.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
223.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
222.6
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
222.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
221.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
221.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
220.6
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
219.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
219.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
219.2
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
219.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
218.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
217.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
215.7
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
215.6
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
214.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
214.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
214.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
213.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
213.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
213.3
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
213.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
211.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
211.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
211.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
210.9
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
210.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
210.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
209.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
208.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
205.1
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
204.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
202.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
202.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
200.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
199.7
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
199.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
197.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
197.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
196.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
195.9
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
195.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
194.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
194.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
193.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
193.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
192.8
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
191.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
190.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
189.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
189.5
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
189.3
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
189.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
188.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
188.8
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
187.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
187.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
186.8
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
186.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
185.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
185.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
184.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
184.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
183.6
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
182.8
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
182.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
179.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
179.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
179.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
179.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
178.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
178.9
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
178.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
177.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
176.2
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
174.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
174.7
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
173.4
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
173.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
173.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
172.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
170.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
170.4
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
169.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
169.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
168.8
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
168.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
167.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
166.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
165.9
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
165.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
165.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
164.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
161.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
159.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
159.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
159.3
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
159.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
159.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
158.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
158.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
156.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
156.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
156.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
155.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
155.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
154.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
154.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
152.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
151.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
148.5
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
148.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
147.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
147.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
147.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
145.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
144.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
142.9
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
138.8
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
137.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
137.5
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
137.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
136.6
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
135.6
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
135.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
134.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
134.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
132.3
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
132.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
130.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
129.8
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
128.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
128.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
124.0
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
123.4
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
122.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
121.6
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
119.0
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
117.9
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
117.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
113.9
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
110.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
110.2
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
107.5
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
107.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
100.9
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
87.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
86.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
84.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
82.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
79.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
79.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
73.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
72.0
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
71.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
68.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
60.6
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
59.3
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HMGN2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
244.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
448.7
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
429.2
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
416.5
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
402.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
355.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
338.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
332.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
332.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
332.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
327.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
322.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
319.0
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
317.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
315.3
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
307.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
307.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
305.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
305.1
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
303.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
297.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
295.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
294.2
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
293.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
289.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
289.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
289.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
288.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
283.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
281.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
278.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
278.1
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
277.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
271.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
268.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
268.1
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
264.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
264.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
262.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
259.4
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
256.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
255.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
255.2
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
254.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
254.5
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
253.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
252.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
249.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
247.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
246.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
245.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
243.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
242.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
238.7
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
237.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
235.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
234.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
232.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
230.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
230.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
226.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
226.2
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
226.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
226.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
224.3
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
224.2
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
222.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
221.0
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
220.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
219.9
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
219.5
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
217.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
214.9
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
212.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
212.1
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
210.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
199.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
195.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
195.3
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
194.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
194.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
193.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
186.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
186.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
184.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
181.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
178.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
171.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
170.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
159.3
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
158.4
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
150.6
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
140.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
132.5
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
127.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
115.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
111.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
107.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
107.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
90.9
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HMGN2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
158.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
501.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
453.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
450.0
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
437.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
433.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
425.8
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
419.2
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
417.0
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
403.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
395.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
384.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
372.1
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
371.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
367.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
357.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
357.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
355.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
343.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
343.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
338.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
328.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
321.9
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
319.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
314.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
313.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
310.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
294.3
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
294.2
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
293.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
291.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
289.9
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
289.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
285.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
284.5
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
282.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
280.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
275.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
274.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
273.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
271.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
271.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
268.8
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
266.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
261.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
260.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
256.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
253.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
252.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
251.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
250.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
250.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
249.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
247.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
246.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
245.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
244.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
242.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
242.5
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
242.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
241.4
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
240.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
239.8
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
237.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
232.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
232.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
231.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
231.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
230.9
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
229.4
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
228.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
228.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
227.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
227.4
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
226.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
226.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
226.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
225.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
224.0
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
222.7
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
222.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
220.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
219.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
218.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
217.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
217.3
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
217.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
217.1
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
216.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
216.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
215.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
214.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
213.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
213.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
213.3
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
210.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
207.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
206.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
206.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
205.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
204.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
204.5
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
203.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
201.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
201.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
200.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
200.3
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
199.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
199.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
198.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
197.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
197.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
197.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
196.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
195.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
194.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
193.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
193.5
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
192.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
192.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
192.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
191.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
189.7
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
189.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
188.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
188.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
185.7
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
185.3
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
181.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
181.3
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
180.1
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
179.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
179.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
177.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
177.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
176.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
174.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
170.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
170.5
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
169.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
169.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
168.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
167.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
165.9
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
165.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
162.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
161.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
161.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
160.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
159.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
157.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
157.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
156.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
154.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
154.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
154.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
154.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
153.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
152.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
151.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
150.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
149.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
147.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
144.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
143.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
143.5
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
143.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
141.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
138.8
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
137.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
135.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
134.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
133.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
133.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
133.4
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
132.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
132.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
132.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
131.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
130.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
127.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
125.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
125.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
124.8
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
122.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
122.5
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
122.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
121.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
115.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
114.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
111.4
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
111.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
110.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
109.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
108.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
108.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
104.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
101.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
100.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
99.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
99.0
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
98.7
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
95.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
93.5
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
89.5
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
86.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
85.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
83.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
76.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
73.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
68.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
48.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
19.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
15.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
14.8
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
14.6
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
13.8
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
13.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
13.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
13.1
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
12.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
11.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
11.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
10.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
10.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
10.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
10.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
9.6
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
9.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
9.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
9.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
9.1
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
8.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
8.5
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
8.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
8.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
8.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
7.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
7.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
6.5
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
6.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
5.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
5.7
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
5.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
4.7
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
4.5
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
4.4
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
4.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
4.1
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
3.8
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
2.7
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
2.6
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
2.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
2.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
0.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
0.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
0.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
0.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
0.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
0.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
0.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
0.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
0.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
0.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
0.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
0.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
0.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
0.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
0.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
0.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
0.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0075720003
Tumor
0.8
CPT0078990003
Tumor
0.6
CPT0075170001
Normal
0.6
CPT0000780007
Tumor
0.6
CPT0000640003
Tumor
0.6
CPT0014470001
Normal
0.6
CPT0001260009
Tumor
0.5
CPT0086870003
Tumor
0.5
CPT0071150004
Tumor
0.5
CPT0089460004
Tumor
0.5
CPT0088900003
Tumor
0.4
CPT0088550004
Tumor
0.4
CPT0086370003
Normal
0.4
CPT0065870003
Tumor
0.4
CPT0088630003
Tumor
0.4
CPT0092740003
Normal
0.4
CPT0084590001
Normal
0.4
CPT0006440003
Tumor
0.4
CPT0025110003
Tumor
0.4
CPT0088640003
Normal
0.4
CPT0087040003
Tumor
0.4
CPT0092730003
Tumor
0.3
CPT0020020001
Normal
0.3
CPT0014370004
Tumor
0.3
CPT0065820001
Normal
0.3
CPT0007870001
Normal
0.3
CPT0077320001
Normal
0.3
CPT0089480003
Normal
0.3
CPT0025350003
Tumor
0.3
CPT0025580004
Tumor
0.3
CPT0092190003
Normal
0.3
CPT0025920001
Normal
0.3
CPT0079000001
Normal
0.3
CPT0086950003
Tumor
0.3
CPT0088760003
Tumor
0.3
CPT0025290003
Tumor
0.3
CPT0065930003
Tumor
0.3
CPT0075570001
Normal
0.3
CPT0007470001
Normal
0.3
CPT0077110003
Tumor
0.3
CPT0014130001
Normal
0.3
CPT0086890003
Normal
0.2
CPT0026420001
Normal
0.2
CPT0019130003
Tumor
0.2
CPT0086830003
Normal
0.2
CPT0063330001
Normal
0.2
CPT0020130001
Normal
0.2
CPT0088920001
Normal
0.2
CPT0066480003
Tumor
0.2
CPT0088780001
Normal
0.2
CPT0089020003
Tumor
0.2
CPT0014350001
Normal
0.2
CPT0079430001
Normal
0.2
CPT0023710001
Normal
0.2
CPT0075130003
Tumor
0.2
CPT0010160003
Tumor
0.2
CPT0001220008
Tumor
0.2
CPT0066520001
Normal
0.2
CPT0001230001
Normal
0.2
CPT0092800003
Normal
0.2
CPT0079300001
Normal
0.1
CPT0001270001
Normal
0.1
CPT0025230003
Tumor
0.1
CPT0000870016
Tumor
0.1
CPT0079510001
Normal
0.1
CPT0010120001
Normal
0.1
CPT0025170003
Tumor
0.1
CPT0081600003
Tumor
0.1
CPT0079480003
Tumor
0.1
CPT0006730001
Normal
0.1
CPT0001510001
Normal
0.1
CPT0078940001
Normal
0.1
CPT0081620001
Normal
0.1
CPT0019160001
Normal
0.1
CPT0088480003
Tumor
0.1
CPT0064400001
Normal
0.1
CPT0084560003
Tumor
0.1
CPT0077490003
Tumor
0.0
CPT0092310003
Normal
0.0
CPT0086820003
Tumor
0.0
CPT0087050003
Normal
0.0
CPT0088570001
Normal
0.0
CPT0078670001
Normal
0.0
CPT0063640001
Normal
0.0
CPT0088710001
Normal
0.0
CPT0000790001
Normal
0.0
CPT0077500001
Normal
0.0
CPT0078840001
Normal
0.0
CPT0066430001
Normal
0.0
CPT0014450004
Tumor
0.0
CPT0007860003
Tumor
0.0
CPT0000660001
Normal
0.0
CPT0065690003
Tumor
0.0
CPT0025880003
Tumor
0.0
CPT0085670003
Tumor
0.0
CPT0025610001
Normal
-0.1
CPT0063630003
Tumor
-0.1
CPT0000890001
Normal
-0.1
CPT0001350001
Normal
-0.1
CPT0010170001
Normal
-0.1
CPT0089040001
Normal
-0.1
CPT0006630003
Tumor
-0.1
CPT0015910003
Tumor
-0.1
CPT0023690003
Tumor
-0.1
CPT0078530001
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0023360001
Normal
-0.1
CPT0092790003
Tumor
-0.1
CPT0066470004
Tumor
-0.1
CPT0076330003
Tumor
-0.1
CPT0063320003
Tumor
-0.1
CPT0006950001
Normal
-0.1
CPT0092160003
Tumor
-0.1
CPT0078930003
Tumor
-0.1
CPT0025060001
Normal
-0.1
CPT0006900003
Tumor
-0.1
CPT0019990003
Tumor
-0.1
CPT0088690003
Tumor
-0.1
CPT0076350001
Normal
-0.1
CPT0012090003
Normal
-0.2
CPT0088500001
Normal
-0.2
CPT0077140001
Normal
-0.2
CPT0086970003
Normal
-0.2
CPT0079380003
Tumor
-0.2
CPT0079270003
Tumor
-0.2
CPT0079410003
Tumor
-0.2
CPT0001180009
Tumor
-0.2
CPT0025050003
Tumor
-0.2
CPT0002350011
Tumor
-0.2
CPT0001190001
Normal
-0.2
CPT0001550001
Normal
-0.3
CPT0064370003
Tumor
-0.3
CPT0012290003
Normal
-0.3
CPT0015810003
Tumor
-0.3
CPT0001540009
Tumor
-0.3
CPT0026410003
Tumor
-0.3
CPT0065810003
Tumor
-0.3
CPT0006530001
Normal
-0.3
CPT0078830003
Tumor
-0.3
CPT0092290003
Tumor
-0.3
CPT0065450001
Normal
-0.3
CPT0081880003
Tumor
-0.3
CPT0065430003
Tumor
-0.3
CPT0001340003
Tumor
-0.3
CPT0088970003
Tumor
-0.4
CPT0009080003
Normal
-0.4
CPT0007320003
Tumor
-0.4
CPT0077310003
Tumor
-0.4
CPT0020120003
Tumor
-0.4
CPT0079230003
Tumor
-0.4
CPT0075560003
Tumor
-0.5
CPT0086030003
Tumor
-0.5
CPT0086360003
Tumor
-0.5
CPT0010110003
Tumor
-0.5
CPT0009020003
Normal
-0.5
CPT0017850003
Tumor
-0.5
CPT0069010001
Normal
-0.5
CPT0069000003
Tumor
-0.5
CPT0023350003
Tumor
-0.5
CPT0002270011
Tumor
-0.6
CPT0011410003
Tumor
-0.6
CPT0017450001
Normal
-0.6
CPT0012180003
Tumor
-0.6
CPT0014160003
Tumor
-0.6
CPT0024680001
Normal
-0.6
CPT0013790003
Normal
-0.6
CPT0078660003
Tumor
-0.6
CPT0001500009
Tumor
-0.7
CPT0069190001
Normal
-0.7
CPT0021240003
Tumor
-0.7
CPT0078800003
Tumor
-0.7
CPT0082010001
Normal
-0.7
CPT0081990003
Tumor
-0.7
CPT0009000003
Tumor
-0.7
CPT0065750003
Tumor
-0.8
CPT0069160003
Tumor
-0.8
CPT0012080003
Tumor
-0.8
CPT0009060003
Tumor
-0.9
CPT0012280003
Tumor
-0.9
CPT0015730003
Tumor
-1.0
CPT0012920003
Normal
-1.0
CPT0012640003
Normal
-1.1
CPT0018250001
Normal
-1.1
CPT0012770003
Normal
-1.1
CPT0078510003
Tumor
-1.2
CPT0017410003
Tumor
-1.2
CPT0011240003
Tumor
-1.2
CPT0012370003
Tumor
-1.2
CPT0012900004
Tumor
-1.3
CPT0012670003
Tumor
-1.4
CPT0012570003
Normal
-1.6
CPT0024670003
Tumor
-1.6
CPT0079180003
Tumor
-1.7
CPT0012550003
Tumor
-2.0
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
