Expression of HMGN2 in head and neck cancer

HEAD AND NECK SQUAMOUS CELL CARCINOMA (TCGA) - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

HMGN2 is not prognostic in Head and Neck Squamous Cell Carcinoma (TCGA)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 250.94

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average TPM

369.3

Number of samples

492

Samples

Sample	Description	TPM
TCGA-HD-A634-01A	0 years, male, white, stage:Stage IVA, dead, 130 days	1729.9
TCGA-TN-A7HI-01A	0 years, male, white, stage:Stage IVA, alive, 412 days	1182.8
TCGA-CV-6433-01A	0 years, male, white, stage:Stage II, alive, 641 days	1172.8
TCGA-CV-5966-01A	0 years, female, white, stage:Stage IVA, dead, 545 days	1168.5
TCGA-CV-7100-01A	0 years, male, white, stage:Stage III, dead, 274 days	1144.9
TCGA-KU-A6H7-01A	0 years, female, white, stage:Stage IVA, alive, 586 days	1081.4
TCGA-BB-A6UM-01A	0 years, male, white, stage:Stage III, alive, 393 days	1050.0
TCGA-CN-A499-01A	0 years, female, white, stage:Stage II, alive, 717 days	1021.9
TCGA-BA-A4IH-01A	0 years, male, white, stage:'--, alive, 622 days	1019.5
TCGA-CR-5243-01A	0 years, male, white, stage:'--, alive, 2562 days	991.0
TCGA-CN-A6UY-01A	0 years, male, white, stage:Stage IVA, alive, 713 days	960.2
TCGA-QK-A6IG-01A	0 years, male, white, stage:Stage III, dead, 222 days	941.7
TCGA-QK-A6V9-01A	0 years, male, white, stage:Stage II, alive, 833 days	914.6
TCGA-IQ-A61I-01A	0 years, male, black or african american, stage:Stage IVA, dead, 2 days	899.0
TCGA-BB-4224-01A	0 years, male, white, stage:Stage IVA, alive, 278 days	882.9
TCGA-P3-A5Q5-01A	0 years, male, white, stage:Stage IVA, alive, 910 days	880.5
TCGA-HD-8314-01A	0 years, male, white, stage:Stage III, alive, 670 days	867.0
TCGA-P3-A5QF-01A	0 years, male, white, stage:Stage IVA, dead, 330 days	843.1
TCGA-BA-A6DE-01A	0 years, female, white, stage:Stage II, alive, 440 days	809.4
TCGA-RS-A6TP-01A	0 years, male, white, stage:Stage II, alive, 516 days	807.4
TCGA-QK-AA3K-01A	0 years, male, black or african american, stage:Stage IVA, alive, 253 days	803.7
TCGA-BA-4074-01A	0 years, male, white, stage:Stage IVA, dead, 462 days	796.3
TCGA-CR-7368-01A	0 years, male, white, stage:Stage IVA, alive, 1245 days	772.6
TCGA-DQ-7591-01A	0 years, male, white, stage:'--, alive, 622 days	770.9
TCGA-CN-A49C-01A	0 years, male, white, stage:'--, alive, 645 days	770.6
TCGA-CR-7385-01A	0 years, male, white, stage:'--, alive, 997 days	768.2
TCGA-QK-A6IF-01A	0 years, male, white, stage:'--, alive, 704 days	751.6
TCGA-HL-7533-01A	0 years, male, white, stage:'--, alive, 1057 days	746.2
TCGA-CV-7102-01A	0 years, female, white, stage:Stage IVA, dead, 56 days	734.5
TCGA-CN-A6V6-01A	0 years, male, white, stage:Stage IVA, alive, 635 days	728.1
TCGA-UP-A6WW-01A	0 years, male, white, stage:'--, alive, 518 days	727.2
TCGA-CV-6441-01A	0 years, male, white, stage:Stage III, dead, 292 days	723.0
TCGA-CN-5363-01A	0 years, male, black or african american, stage:Stage IVB, dead, 253 days	706.5
TCGA-IQ-A61E-01A	0 years, female, white, stage:Stage III, alive, 1147 days	696.5
TCGA-F7-8298-01A	0 years, male, white, stage:Stage I, alive, 995 days	695.0
TCGA-CN-A49B-01A	0 years, male, white, stage:Stage III, alive, 904 days	678.5
TCGA-BA-5153-01A	0 years, male, white, stage:'--, dead, 1762 days	668.7
TCGA-BA-A4IG-01A	0 years, male, white, stage:'--, alive, 855 days	668.5
TCGA-D6-A6EM-01A	0 years, female, white, stage:Stage III, alive, 232 days	664.6
TCGA-CN-5370-01A	0 years, male, white, stage:Stage III, dead, 259 days	664.2
TCGA-MZ-A5BI-01A	0 years, male, white, stage:'--, dead, 217 days	664.1
TCGA-P3-A6T6-01A	0 years, male, white, stage:Stage IVA, dead, 395 days	638.0
TCGA-CR-6473-01A	0 years, male, white, stage:'--, alive, 1125 days	633.4
TCGA-CR-7404-01A	0 years, male, white, stage:'--, alive, 1472 days	617.7
TCGA-CN-5374-01A	0 years, female, white, stage:Stage IVA, dead, 1732 days	615.1
TCGA-QK-AA3J-01A	0 years, male, black or african american, stage:Stage I, alive, 466 days	613.3
TCGA-BB-4225-01A	0 years, male, white, stage:'--, alive, 146 days	611.9
TCGA-D6-A6EN-01A	0 years, male, white, stage:Stage III, alive, 687 days	611.4
TCGA-CR-6480-01A	0 years, male, white, stage:'--, alive, 362 days	600.5
TCGA-CV-7432-01A	0 years, male, white, stage:Stage II, dead, 2570 days	598.0
TCGA-HD-7832-01A	0 years, male, white, stage:Stage IVA, alive, 836 days	594.3
TCGA-CX-A4AQ-01A	0 years, male, white, stage:Stage IVA, alive, 1555 days	593.2
TCGA-CV-6003-01A	0 years, female, white, stage:Stage III, alive, 1665 days	590.8
TCGA-BB-A5HY-01A	0 years, male, white, stage:Stage IVA, dead, 321 days	587.7
TCGA-P3-A6SW-01A	0 years, male, white, stage:Stage IVB, alive, 1120 days	580.1
TCGA-P3-A5QE-01A	0 years, male, white, stage:Stage III, alive, 1559 days	577.8
TCGA-CQ-5323-01A	0 years, male, white, stage:Stage I, alive, 1466 days	576.5
TCGA-P3-A6T5-01A	0 years, female, white, stage:Stage IVA, dead, 882 days	572.2
TCGA-DQ-5625-01A	0 years, female, white, stage:'--, dead, 1133 days	570.7
TCGA-D6-A6EP-01A	0 years, male, white, stage:Stage III, alive, 424 days	569.4
TCGA-BB-4228-01A	0 years, male, white, stage:Stage III, alive, 559 days	568.0
TCGA-CR-6478-01A	0 years, female, white, stage:'--, dead, 183 days	562.7
TCGA-CR-7399-01A	0 years, female, white, stage:Stage IVA, alive, 181 days	559.4
TCGA-CR-6467-01A	0 years, male, white, stage:Stage III, alive, 1777 days	556.6
TCGA-CV-5977-01A	0 years, male, white, stage:Stage IVA, alive, 1840 days	552.4
TCGA-CN-5367-01A	0 years, female, white, stage:Stage IVA, dead, 352 days	551.2
TCGA-P3-A6T2-01A	0 years, male, white, stage:Stage IVA, alive, 2298 days	550.0
TCGA-UF-A7JS-01A	0 years, male, white, stage:Stage IVA, dead, 680 days	545.7
TCGA-CQ-6219-01A	0 years, female, white, stage:Stage IVA, dead, 479 days	543.3
TCGA-H7-8501-01A	0 years, male, white, stage:Stage IVA, alive, 461 days	541.8
TCGA-CR-6472-01A	0 years, male, white, stage:'--, alive, 1050 days	539.9
TCGA-BA-6873-01A	0 years, male, white, stage:Stage IVA, alive, 122 days	536.4
TCGA-CV-A6JU-01A	0 years, female, white, stage:Stage IVB, alive, 110 days	536.3
TCGA-BB-4223-01A	0 years, male, white, stage:Stage IVA, alive, 3221 days	536.2
TCGA-CN-5364-01A	0 years, male, white, stage:Stage IVA, dead, 493 days	534.5
TCGA-CR-5248-01A	0 years, male, white, stage:'--, alive, 1663 days	533.9
TCGA-CN-A6V7-01A	0 years, male, white, stage:Stage IVA, alive, 594 days	532.5
TCGA-CV-6950-01A	0 years, male, white, stage:Stage IVA, dead, 459 days	529.7
TCGA-T3-A92N-01A	0 years, male, black or african american, stage:Stage IVA, dead, 95 days	529.6
TCGA-CV-6939-01A	0 years, male, white, stage:Stage IVA, dead, 666 days	528.4
TCGA-BA-5559-01A	0 years, male, white, stage:'--, dead, 2083 days	528.3
TCGA-HD-7754-01A	0 years, male, white, stage:Stage IVA, alive, 783 days	517.6
TCGA-CN-4741-01A	0 years, male, white, stage:Stage IVA, alive, 2239 days	516.7
TCGA-CV-7414-01A	0 years, male, white, stage:Stage IVA, dead, 14 days	513.7
TCGA-H7-A76A-01A	0 years, male, white, stage:'--, alive, 637 days	513.2
TCGA-CN-4735-01A	0 years, male, white, stage:Stage IVA, alive, 1737 days	513.1
TCGA-H7-8502-01A	0 years, male, white, stage:Stage IVA, alive, 458 days	508.6
TCGA-CX-7082-01A	0 years, male, white, stage:Stage IVA, dead, 11 days	507.2
TCGA-CQ-5334-01A	0 years, male, white, stage:Stage IVA, dead, 129 days	504.8
TCGA-CV-7247-01A	0 years, male, white, stage:Stage III, dead, 577 days	497.1
TCGA-F7-A61W-01A	0 years, male, asian, stage:Stage IVA, alive, 14 days	492.3
TCGA-CV-A45U-01A	0 years, male, white, stage:Stage IVA, dead, 1079 days	490.7
TCGA-P3-A6SX-01A	0 years, male, white, stage:Stage III, dead, 1430 days	489.3
TCGA-CV-A6JZ-01A	0 years, male, white, stage:Stage II, alive, 714 days	487.6
TCGA-CV-7428-01A	0 years, male, white, stage:Stage IVA, dead, 1671 days	487.0
TCGA-CV-6961-01A	0 years, male, white, stage:Stage II, dead, 76 days	484.7
TCGA-D6-6515-01A	0 years, female, white, stage:Stage II, dead, 403 days	483.7
TCGA-4P-AA8J-01A	0 years, male, black or african american, stage:Stage IVA, alive, 102 days	482.3
TCGA-CV-7255-01A	0 years, female, white, stage:Stage IVA, dead, 64 days	476.4
TCGA-CR-6470-01A	0 years, male, white, stage:Stage II, alive, 1521 days	475.8
TCGA-CV-A464-01A	0 years, male, white, stage:Stage III, alive, 1722 days	473.4
TCGA-UF-A7JO-01A	0 years, female, white, stage:Stage IVA, dead, 631 days	473.2
TCGA-CQ-5333-01A	0 years, male, white, stage:Stage II, dead, 341 days	472.9
TCGA-CV-6936-01A	0 years, male, white, stage:Stage IVA, dead, 166 days	467.3
TCGA-CR-6482-01A	0 years, male, black or african american, stage:'--, alive, 345 days	467.0
TCGA-CN-5365-01A	0 years, male, white, stage:Stage IVB, dead, 351 days	464.4
TCGA-CV-A6JE-01A	0 years, male, white, stage:'--, alive, 1075 days	464.3
TCGA-F7-A620-01A	0 years, male, white, stage:Stage III, alive, 543 days	463.7
TCGA-CN-A63U-01A	0 years, male, white, stage:Stage IVA, alive, 964 days	462.5
TCGA-CV-7422-01A	0 years, female, white, stage:Stage IVA, dead, 1037 days	460.4
TCGA-MZ-A6I9-01A	0 years, male, white, stage:'--, dead, 489 days	458.6
TCGA-BA-7269-01A	0 years, male, white, stage:Stage III, alive, 1273 days	457.5
TCGA-CV-5444-01A	0 years, male, black or african american, stage:Stage IVA, alive, 2437 days	456.4
TCGA-CR-6487-01A	0 years, male, white, stage:Stage I, alive, 234 days	456.4
TCGA-CQ-A4CB-01A	0 years, male, stage:Stage III, alive, 893 days	455.1
TCGA-CV-A461-01A	0 years, male, white, stage:'--, dead, 2064 days	453.7
TCGA-CV-7410-01A	0 years, male, white, stage:Stage III, dead, 6417 days	447.3
TCGA-CV-7406-01A	0 years, male, white, stage:Stage II, dead, 1748 days	446.7
TCGA-MT-A67F-01A	0 years, female, white, stage:Stage IVA, alive, 384 days	445.3
TCGA-F7-A624-01A	0 years, male, white, stage:Stage II, alive, 378 days	443.4
TCGA-D6-6823-01A	0 years, male, white, stage:Stage II, alive, 701 days	443.0
TCGA-BA-4075-01A	0 years, male, black or african american, stage:Stage III, dead, 283 days	442.8
TCGA-CV-7434-01A	0 years, male, white, stage:Stage IVA, dead, 218 days	440.4
TCGA-CV-7416-01A	0 years, female, white, stage:Stage IVA, dead, 763 days	439.8
TCGA-CQ-5330-01A	0 years, female, white, stage:Stage IVA, alive, 1897 days	437.5
TCGA-CN-6995-01A	0 years, male, white, stage:Stage IVA, dead, 112 days	437.1
TCGA-CR-7369-01A	0 years, male, white, stage:Stage IVA, dead, 1090 days	435.6
TCGA-CQ-7068-01A	0 years, female, white, stage:Stage II, alive, 1309 days	435.0
TCGA-CQ-A4CD-01A	0 years, male, white, stage:Stage IVA, alive, 1022 days	434.1
TCGA-D6-A4Z9-01A	0 years, male, white, stage:Stage IVA, alive, 539 days	431.2
TCGA-CV-7090-01A	0 years, male, white, stage:Stage II, alive, 5252 days	429.8
TCGA-MZ-A7D7-01A	0 years, male, white, stage:Stage IVA, alive, 547 days	429.5
TCGA-HD-8635-01A	0 years, female, white, stage:Stage III, alive, 695 days	428.6
TCGA-IQ-A61O-01A	0 years, male, white, stage:Stage IVA, dead, 421 days	427.3
TCGA-KU-A66T-01A	0 years, female, white, stage:Stage IVA, alive, 552 days	427.3
TCGA-CV-7438-01A	0 years, female, white, stage:Stage I, dead, 194 days	422.7
TCGA-CV-A6JD-01A	0 years, female, white, stage:'--, dead, 182 days	420.1
TCGA-CN-A642-01A	0 years, male, white, stage:Stage IVB, dead, 82 days	418.5
TCGA-CQ-5326-01A	0 years, male, white, stage:Stage IVA, dead, 89 days	418.1
TCGA-UF-A7JT-01A	0 years, female, white, stage:Stage IVA, dead, 993 days	417.9
TCGA-CV-A460-01A	0 years, male, white, stage:'--, dead, 1838 days	416.0
TCGA-CN-6022-01A	0 years, male, white, stage:Stage IVA, dead, 281 days	415.4
TCGA-IQ-A61G-01A	0 years, male, white, stage:Stage IVA, alive, 360 days	415.2
TCGA-CR-7402-01A	0 years, male, white, stage:'--, alive, 911 days	414.0
TCGA-P3-A5Q6-01A	0 years, male, white, stage:Stage IVA, dead, 480 days	413.6
TCGA-CR-7377-01A	0 years, male, white, stage:Stage IVA, dead, 279 days	412.8
TCGA-CR-7383-01A	0 years, female, white, stage:Stage I, dead, 521 days	412.1
TCGA-CV-7415-01A	0 years, male, white, stage:Stage IVA, dead, 695 days	409.8
TCGA-CV-6942-01A	0 years, female, white, stage:Stage II, alive, 4282 days	409.4
TCGA-BA-A6DD-01A	0 years, male, black or african american, stage:Stage IVA, dead, 173 days	409.3
TCGA-HD-7753-01A	0 years, male, black or african american, stage:Stage I, alive, 866 days	408.7
TCGA-T2-A6WX-01A	0 years, female, white, stage:'--, dead, 209 days	406.0
TCGA-BB-A6UO-01A	0 years, female, white, stage:Stage IVA, dead, 268 days	405.5
TCGA-CN-5361-01A	0 years, male, white, stage:Stage IVA, dead, 2120 days	405.3
TCGA-TN-A7HL-01A	0 years, male, white, stage:Stage IVA, alive, 619 days	405.0
TCGA-CN-A63T-01A	0 years, male, white, stage:Stage IVA, alive, 225 days	404.7
TCGA-CV-5436-01A	0 years, male, stage:Stage IVA, dead, 584 days	404.1
TCGA-WA-A7H4-01A	0 years, male, white, stage:Stage II, alive, 443 days	403.2
TCGA-CR-5249-01A	0 years, female, white, stage:Stage II, alive, 1152 days	402.4
TCGA-DQ-5631-01A	0 years, male, white, stage:'--, dead, 548 days	401.9
TCGA-UF-A7JK-01A	0 years, male, stage:Stage IVA, dead, 424 days	401.2
TCGA-D6-A6EO-01A	0 years, male, white, stage:Stage IVA, alive, 759 days	400.8
TCGA-CV-5443-01A	0 years, male, black or african american, stage:Stage III, alive, 2784 days	399.8
TCGA-BA-4078-01A	0 years, male, white, stage:'--, dead, 276 days	397.0
TCGA-CR-7395-01A	0 years, female, white, stage:Stage II, alive, 930 days	396.3
TCGA-CN-6011-01A	0 years, male, white, stage:Stage IVA, alive, 933 days	395.3
TCGA-BA-A6D8-01A	0 years, male, black or african american, stage:Stage IVA, alive, 850 days	394.0
TCGA-CN-6996-01A	0 years, female, white, stage:Stage IVA, dead, 530 days	390.9
TCGA-CV-6959-01A	0 years, male, white, stage:Stage III, dead, 256 days	390.4
TCGA-CR-7382-01A	0 years, male, white, stage:Stage IVA, alive, 796 days	387.9
TCGA-UF-A718-01A	0 years, male, white, stage:Stage IVA, alive, 1971 days	386.5
TCGA-CN-4730-01A	0 years, male, white, stage:Stage IVA, alive, 817 days	385.7
TCGA-CV-7099-01A	0 years, female, white, stage:Stage II, dead, 243 days	385.3
TCGA-BB-4227-01A	0 years, male, white, stage:Stage IVA, alive, 134 days	384.7
TCGA-T3-A92M-01A	0 years, male, black or african american, stage:Stage IVA, alive, 417 days	383.6
TCGA-BB-8596-01A	0 years, female, white, stage:Stage IVA, alive, 2161 days	380.9
TCGA-F7-A61S-01A	0 years, male, white, stage:Stage III, alive, 576 days	380.8
TCGA-CN-6023-01A	0 years, male, white, stage:Stage IVA, alive, 1584 days	379.2
TCGA-CN-4723-01A	0 years, male, white, stage:Stage IVA, alive, 1699 days	377.6
TCGA-BA-6872-01A	0 years, male, white, stage:'--, dead, 384 days	377.2
TCGA-CV-7568-01A	0 years, female, white, stage:Stage IVA, dead, 927 days	377.0
TCGA-P3-A6T4-01A	0 years, male, white, stage:Stage IVA, dead, 62 days	375.3
TCGA-CN-4731-01A	0 years, female, white, stage:Stage IVA, dead, 998 days	375.0
TCGA-CN-4736-01A	0 years, female, white, stage:'--, dead, 395 days	374.2
TCGA-UF-A7JF-01A	0 years, male, white, stage:Stage IVA, alive, 1686 days	374.1
TCGA-CV-7089-01A	0 years, male, white, stage:Stage IVA, dead, 1972 days	373.2
TCGA-D6-A6EQ-01A	0 years, male, white, stage:Stage IVA, alive, 368 days	371.2
TCGA-CQ-5329-01A	0 years, female, white, stage:Stage II, alive, 2143 days	370.8
TCGA-CQ-6224-01A	0 years, male, white, stage:Stage IVA, alive, 1721 days	370.6
TCGA-QK-A64Z-01A	0 years, female, white, stage:Stage IVA, dead, 641 days	368.5
TCGA-CV-5430-01A	0 years, male, white, stage:Stage IVA, alive, 4241 days	368.1
TCGA-MT-A7BN-01A	0 years, male, white, stage:Stage IVA, alive, 469 days	367.8
TCGA-HD-A6I0-01A	0 years, male, white, stage:Stage IVA, alive, 210 days	367.3
TCGA-CQ-A4C6-01A	0 years, male, asian, stage:Stage II, alive, 1353 days	366.9
TCGA-P3-A6T7-01A	0 years, male, white, stage:Stage IVA, dead, 487 days	365.0
TCGA-CN-A497-01A	0 years, male, stage:Stage III, alive, 1065 days	364.8
TCGA-IQ-7630-01A	0 years, male, white, stage:Stage II, alive, 485 days	363.6
TCGA-F7-A623-01A	0 years, male, white, stage:Stage IVA, alive, 616 days	359.8
TCGA-CR-7373-01A	0 years, male, white, stage:Stage IVA, alive, 889 days	359.3
TCGA-BA-A4IF-01A	0 years, male, white, stage:'--, alive, 895 days	357.8
TCGA-CV-7104-01A	0 years, female, white, stage:Stage IVA, dead, 393 days	357.6
TCGA-CV-A6JN-01A	0 years, male, white, stage:'--, alive, 906 days	357.3
TCGA-D6-A74Q-01A	0 years, male, white, stage:Stage IVA, alive, 710 days	356.7
TCGA-BA-5555-01A	0 years, male, black or african american, stage:Stage IVA, alive, 520 days	356.1
TCGA-CN-4734-01A	0 years, male, white, stage:Stage II, alive, 1690 days	354.9
TCGA-HD-A633-01A	0 years, male, white, stage:Stage IVA, alive, 421 days	353.0
TCGA-CR-7364-01A	0 years, male, white, stage:Stage III, alive, 1435 days	352.7
TCGA-CV-6954-01A	0 years, male, black or african american, stage:Stage IVA, dead, 2002 days	352.6
TCGA-BA-A6DB-01A	0 years, female, white, stage:Stage I, alive, 216 days	351.4
TCGA-DQ-7588-01A	0 years, male, white, stage:'--, dead, 427 days	350.8
TCGA-T2-A6WZ-01A	0 years, male, white, stage:'--, dead, 484 days	350.3
TCGA-KU-A66S-01A	0 years, female, white, stage:Stage III, dead, 406 days	349.6
TCGA-UF-A7JA-01A	0 years, female, white, stage:Stage IVA, alive, 2265 days	349.4
TCGA-CV-7235-01A	0 years, male, white, stage:Stage II, alive, 2347 days	349.1
TCGA-UF-A719-01A	0 years, male, stage:Stage II, alive, 1663 days	349.0
TCGA-UF-A7JV-01A	0 years, female, white, stage:Stage IVA, dead, 90 days	347.3
TCGA-CQ-A4CG-01A	0 years, female, white, stage:Stage III, dead, 430 days	346.9
TCGA-CV-A6K2-01A	0 years, male, white, stage:Stage IVA, dead, 317 days	346.6
TCGA-QK-A652-01A	0 years, male, white, stage:Stage III, alive, 645 days	345.8
TCGA-HD-A4C1-01A	0 years, female, black or african american, stage:Stage IVA, alive, 11 days	345.0
TCGA-CQ-A4C7-01A	0 years, male, white, stage:Stage III, dead, 353 days	343.3
TCGA-CN-A63W-01A	0 years, female, white, stage:Stage IVA, dead, 377 days	340.9
TCGA-CR-6477-01A	0 years, female, white, stage:'--, alive, 514 days	340.2
TCGA-BA-A8YP-01A	0 years, male, black or african american, stage:Stage IVB, alive, 499 days	339.9
TCGA-CV-7097-01A	0 years, male, white, stage:Stage II, dead, 385 days	338.2
TCGA-CV-7254-01A	0 years, male, white, stage:Stage II, dead, 1459 days	336.5
TCGA-RS-A6TO-01A	0 years, female, white, stage:Stage IVA, dead, 387 days	336.1
TCGA-CV-5978-01A	0 years, female, black or african american, stage:Stage IVB, dead, 215 days	336.0
TCGA-D6-6827-01A	0 years, female, white, stage:Stage I, alive, 568 days	335.9
TCGA-DQ-7592-01A	0 years, male, american indian or alaska native, stage:'--, alive, 1143 days	335.9
TCGA-BA-4076-01A	0 years, male, white, stage:'--, dead, 415 days	335.1
TCGA-D6-6825-01A	0 years, male, white, stage:Stage I, alive, 491 days	334.4
TCGA-UF-A71B-01A	0 years, male, white, stage:Stage IVA, alive, 1506 days	334.0
TCGA-BA-6871-01A	0 years, male, white, stage:'--, dead, 108 days	333.7
TCGA-CV-7238-01A	0 years, female, white, stage:Stage II, alive, 2727 days	333.2
TCGA-QK-A6IH-01A	0 years, female, white, stage:Stage IVB, alive, 653 days	332.9
TCGA-CR-6471-01A	0 years, male, white, stage:Stage IVA, dead, 1202 days	332.7
TCGA-BA-A6DI-01A	0 years, male, black or african american, stage:'--, dead, 336 days	330.0
TCGA-CN-5366-01A	0 years, male, white, stage:Stage IVA, dead, 360 days	329.1
TCGA-CV-A45T-01A	0 years, female, white, stage:'--, dead, 4856 days	329.0
TCGA-BB-A5HU-01A	0 years, male, white, stage:Stage IVA, alive, 782 days	328.1
TCGA-CV-7413-01A	0 years, female, white, stage:Stage II, dead, 294 days	327.4
TCGA-CV-7263-01A	0 years, male, black or african american, stage:Stage II, dead, 560 days	327.4
TCGA-DQ-5630-01A	0 years, male, white, stage:'--, alive, 1030 days	326.9
TCGA-BA-A6DJ-01A	0 years, male, asian, stage:Stage IVA, dead, 407 days	326.5
TCGA-QK-A6VB-01A	0 years, male, white, stage:Stage IVA, alive, 641 days	326.0
TCGA-CR-6492-01A	0 years, male, white, stage:Stage III, alive, 479 days	325.5
TCGA-CV-7446-01A	0 years, male, white, stage:Stage IVA, dead, 1093 days	325.5
TCGA-QK-A8ZA-01A	0 years, male, black or african american, stage:'--, dead, 371 days	323.6
TCGA-CV-5442-01A	0 years, female, white, stage:Stage IVA, alive, 2327 days	323.3
TCGA-CV-7253-01A	0 years, male, black or african american, stage:Stage IVA, dead, 361 days	323.1
TCGA-CR-6493-01A	0 years, male, black or african american, stage:Stage IVA, dead, 282 days	322.8
TCGA-CV-5432-01A	0 years, male, white, stage:Stage III, alive, 3930 days	322.2
TCGA-QK-A6IJ-01A	0 years, male, white, stage:Stage III, alive, 387 days	322.0
TCGA-HD-7229-01A	0 years, male, white, stage:Stage IVA, alive, 1027 days	320.8
TCGA-UF-A71A-01A	0 years, male, white, stage:Stage IVA, dead, 86 days	320.0
TCGA-CV-5971-01A	0 years, male, white, stage:Stage IVA, alive, 701 days	319.4
TCGA-CQ-6220-01A	0 years, male, white, stage:Stage III, dead, 985 days	319.2
TCGA-F7-7848-01A	0 years, male, white, stage:Stage IVA, alive, 1131 days	319.0
TCGA-CV-7407-01A	0 years, female, white, stage:Stage II, dead, 1081 days	318.7
TCGA-CV-6938-01A	0 years, male, white, stage:Stage II, dead, 144 days	317.6
TCGA-IQ-A61H-01A	0 years, male, white, stage:Stage II, alive, 1138 days	317.5
TCGA-CV-5976-01A	0 years, male, white, stage:Stage IVA, alive, 1478 days	317.5
TCGA-T2-A6X0-01A	0 years, male, white, stage:'--, alive, 216 days	316.6
TCGA-P3-A6T3-01A	0 years, male, white, stage:Stage IVA, dead, 577 days	313.4
TCGA-QK-A6VC-01A	0 years, female, black or african american, stage:Stage IVA, alive, 600 days	311.2
TCGA-CV-7440-01A	0 years, male, white, stage:Stage II, dead, 675 days	311.0
TCGA-CV-7421-01A	0 years, male, white, stage:Stage IVA, dead, 2 days	311.0
TCGA-D6-8569-01A	0 years, male, white, stage:Stage II, alive, 770 days	309.9
TCGA-CQ-7065-01A	0 years, male, asian, stage:Stage II, alive, 1628 days	309.2
TCGA-CQ-5327-01A	0 years, female, asian, stage:Stage IVA, alive, 1660 days	308.9
TCGA-BB-4217-01A	0 years, male, black or african american, stage:Stage IVA, alive, 187 days	308.6
TCGA-QK-A8Z8-01A	0 years, female, black or african american, stage:Stage IVC, dead, 171 days	308.0
TCGA-CN-4742-01A	0 years, female, white, stage:Stage IVA, dead, 397 days	307.5
TCGA-CR-7398-01A	0 years, female, white, stage:Stage II, alive, 156 days	306.6
TCGA-CV-7178-01A	0 years, female, white, stage:Stage IVA, dead, 2166 days	305.0
TCGA-CV-7433-01A	0 years, male, white, stage:Stage IVA, dead, 601 days	303.3
TCGA-IQ-A6SG-01A	0 years, female, white, stage:Stage III, alive, 579 days	301.3
TCGA-F7-A61V-01A	0 years, male, white, stage:Stage II, alive, 759 days	301.2
TCGA-BB-8601-01A	0 years, male, black or african american, stage:Stage III, alive, 624 days	300.7
TCGA-P3-A5QA-01A	0 years, male, stage:Stage I, alive, 2182 days	300.3
TCGA-CN-6018-01A	0 years, female, white, stage:Stage IVA, dead, 580 days	299.8
TCGA-CN-A6V3-01A	0 years, male, white, stage:Stage IVA, alive, 742 days	299.2
TCGA-MT-A51W-01A	0 years, female, white, stage:Stage I, alive, 437 days	298.7
TCGA-CN-4739-01A	0 years, male, white, stage:Stage IVA, dead, 1394 days	298.3
TCGA-CN-4725-01A	0 years, male, white, stage:Stage II, alive, 1157 days	297.9
TCGA-CQ-A4CH-01A	0 years, male, asian, stage:Stage II, dead, 379 days	295.2
TCGA-CV-7435-01A	0 years, female, white, stage:Stage IVA, dead, 4680 days	294.1
TCGA-D6-8568-01A	0 years, male, white, stage:Stage II, alive, 759 days	293.0
TCGA-BA-A6DL-01A	0 years, male, white, stage:'--, alive, 623 days	292.1
TCGA-CV-A468-01A	0 years, male, stage:Stage IVA, dead, 464 days	291.4
TCGA-CV-6940-01A	0 years, female, white, stage:Stage III, dead, 804 days	291.2
TCGA-CR-6488-01A	0 years, female, white, stage:Stage II, alive, 379 days	290.6
TCGA-BA-5556-01A	0 years, female, white, stage:Stage II, alive, 725 days	289.3
TCGA-CV-6960-01A	0 years, male, black or african american, stage:Stage III, dead, 862 days	288.5
TCGA-BA-A4II-01A	0 years, male, white, stage:Stage II, alive, 918 days	288.0
TCGA-CN-A498-01A	0 years, female, white, stage:Stage III, dead, 773 days	285.4
TCGA-CN-4740-01A	0 years, female, white, stage:Stage IVA, dead, 839 days	283.9
TCGA-CV-5441-01A	0 years, male, white, stage:Stage IVA, alive, 2886 days	283.4
TCGA-CV-7418-01A	0 years, male, black or african american, stage:Stage IVA, dead, 789 days	283.4
TCGA-CV-5979-01A	0 years, male, white, stage:Stage IVA, alive, 1315 days	282.8
TCGA-UF-A7JD-01A	0 years, male, stage:Stage IVA, dead, 739 days	282.1
TCGA-MT-A51X-01A	0 years, male, white, stage:Stage IVA, alive, 242 days	281.2
TCGA-CQ-6229-01A	0 years, male, white, stage:Stage II, alive, 1179 days	278.8
TCGA-CV-7103-01A	0 years, male, white, stage:Stage IVA, dead, 1591 days	277.6
TCGA-CV-7429-01A	0 years, male, white, stage:Stage IVA, dead, 107 days	275.7
TCGA-UF-A7J9-01A	0 years, male, white, stage:Stage IVA, alive, 1358 days	274.1
TCGA-CV-6951-01A	0 years, male, white, stage:Stage IVA, dead, 915 days	273.3
TCGA-CR-7386-01A	0 years, male, white, stage:Stage IVA, alive, 1430 days	272.8
TCGA-CR-6481-01A	0 years, male, white, stage:'--, alive, 311 days	272.0
TCGA-P3-A6T8-01A	0 years, male, white, stage:Stage IVA, alive, 400 days	270.6
TCGA-CN-A49A-01A	0 years, male, white, stage:Stage IVB, dead, 526 days	269.9
TCGA-CV-7236-01A	0 years, female, white, stage:Stage IVA, dead, 144 days	269.6
TCGA-CV-5434-01A	0 years, male, black or african american, stage:Stage IVA, dead, 3314 days	269.3
TCGA-CR-7376-01A	0 years, male, white, stage:Stage III, alive, 972 days	269.2
TCGA-CN-5369-01A	0 years, female, white, stage:Stage IVA, dead, 1 days	269.1
TCGA-CV-A6K1-01A	0 years, male, white, stage:Stage IVA, alive, 685 days	268.7
TCGA-CN-4729-01A	0 years, male, white, stage:Stage III, alive, 392 days	268.1
TCGA-D6-6824-01A	0 years, male, white, stage:Stage IVA, alive, 77 days	267.7
TCGA-CQ-A4CI-01A	0 years, male, white, stage:Stage III, alive, 950 days	267.6
TCGA-CV-A45Q-01A	0 years, female, white, stage:'--, dead, 5152 days	267.0
TCGA-CV-5431-01A	0 years, male, white, stage:Stage IVA, dead, 522 days	266.9
TCGA-CV-6948-01A	0 years, female, white, stage:Stage IVB, dead, 1289 days	263.4
TCGA-UF-A7JH-01A	0 years, male, black or african american, stage:Stage IVA, alive, 896 days	263.2
TCGA-CV-7427-01A	0 years, female, white, stage:Stage II, dead, 4760 days	263.1
TCGA-CQ-5325-01A	0 years, male, white, stage:Stage I, dead, 654 days	262.5
TCGA-F7-A622-01A	0 years, male, white, stage:Stage III, dead, 359 days	262.2
TCGA-KU-A6H8-01A	0 years, male, white, stage:Stage IVA, dead, 327 days	261.7
TCGA-CR-5250-01A	0 years, male, white, stage:'--, alive, 799 days	261.5
TCGA-CQ-5331-01A	0 years, female, white, stage:'--, alive, 1399 days	260.0
TCGA-D6-6517-01A	0 years, male, white, stage:Stage III, alive, 292 days	259.4
TCGA-CV-6934-01A	0 years, female, white, stage:Stage IVA, dead, 65 days	259.0
TCGA-CR-6474-01A	0 years, male, white, stage:Stage IVA, dead, 564 days	258.0
TCGA-MT-A67D-01A	0 years, male, white, stage:Stage II, alive, 56 days	257.7
TCGA-CN-6020-01A	0 years, male, black or african american, stage:Stage III, dead, 205 days	257.4
TCGA-F7-8489-01A	0 years, male, white, stage:Stage II, alive, 658 days	257.1
TCGA-CV-A45R-01A	0 years, male, white, stage:Stage III, alive, 5480 days	256.3
TCGA-CN-A641-01A	0 years, male, white, stage:Stage IVA, alive, 367 days	256.1
TCGA-BA-5152-01A	0 years, male, white, stage:Stage IVA, alive, 1288 days	255.7
TCGA-CR-7374-01A	0 years, female, white, stage:'--, alive, 30 days	255.7
TCGA-F7-A50I-01A	0 years, male, white, stage:Stage IVA, alive, 92 days	255.2
TCGA-CV-6952-01A	0 years, female, white, stage:Stage IVA, dead, 185 days	253.9
TCGA-CV-7095-01A	0 years, female, stage:Stage II, dead, 572 days	253.2
TCGA-CQ-5324-01A	0 years, male, white, stage:Stage III, alive, 1593 days	252.6
TCGA-WA-A7GZ-01A	0 years, male, white, stage:'--, dead, 625 days	251.7
TCGA-CV-7437-01A	0 years, male, stage:Stage II, dead, 506 days	251.6
TCGA-CN-6997-01A	0 years, male, white, stage:Stage IVA, dead, 988 days	251.2
TCGA-CV-7252-01A	0 years, female, black or african american, stage:Stage IVA, dead, 151 days	251.0
TCGA-CR-7392-01A	0 years, female, white, stage:Stage IVA, alive, 1425 days	250.8
TCGA-DQ-5624-01A	0 years, female, white, stage:'--, alive, 1778 days	249.9
TCGA-CV-7091-01A	0 years, male, white, stage:Stage I, alive, 3381 days	249.9
TCGA-CV-7180-01A	0 years, male, white, stage:Stage II, dead, 327 days	249.6
TCGA-TN-A7HJ-01A	0 years, male, white, stage:Stage IVA, alive, 403 days	249.4
TCGA-BA-5558-01A	0 years, male, white, stage:'--, alive, 1995 days	249.1
TCGA-CN-4727-01A	0 years, male, white, stage:Stage IVA, alive, 1560 days	247.8
TCGA-CV-6945-01A	0 years, male, white, stage:Stage IVA, dead, 366 days	247.7
TCGA-CV-7242-01A	0 years, female, white, stage:Stage II, alive, 1095 days	246.1
TCGA-CN-5359-01A	0 years, male, white, stage:Stage IVA, dead, 377 days	245.8
TCGA-UF-A7JC-01A	0 years, male, white, stage:Stage IVA, dead, 546 days	245.3
TCGA-CR-7365-01A	0 years, male, white, stage:Stage IVA, alive, 1191 days	244.9
TCGA-CV-A465-01A	0 years, male, white, stage:Stage III, dead, 215 days	244.1
TCGA-CR-5247-01A	0 years, male, black or african american, stage:'--, alive, 358 days	243.5
TCGA-BB-A5HZ-01A	0 years, male, white, stage:Stage IVA, alive, 827 days	242.7
TCGA-BA-6869-01A	0 years, male, white, stage:Stage III, alive, 644 days	242.6
TCGA-CN-4728-01A	0 years, male, white, stage:Stage IVA, alive, 1724 days	241.9
TCGA-CR-7388-01A	0 years, female, white, stage:'--, dead, 823 days	241.8
TCGA-D6-A6ES-01A	0 years, male, white, stage:Stage IVA, alive, 389 days	241.4
TCGA-CQ-6225-01A	0 years, male, white, stage:Stage III, dead, 403 days	239.4
TCGA-F7-A50G-01A	0 years, male, white, stage:Stage III, alive, 616 days	238.9
TCGA-CN-6994-01A	0 years, male, white, stage:Stage IVA, alive, 1183 days	238.8
TCGA-HD-7831-01A	0 years, male, white, stage:Stage IVA, alive, 667 days	238.7
TCGA-UF-A7JJ-01A	0 years, male, stage:Stage IVA, alive, 549 days	237.3
TCGA-IQ-A6SH-01A	0 years, male, black or african american, stage:Stage III, alive, 471 days	236.9
TCGA-CV-6943-01A	0 years, male, white, stage:Stage III, dead, 602 days	235.8
TCGA-CV-6941-01A	0 years, male, white, stage:Stage III, dead, 342 days	234.9
TCGA-CR-6484-01A	0 years, female, asian, stage:Stage IVA, alive, 354 days	234.6
TCGA-CV-7245-01A	0 years, male, white, stage:Stage IVA, alive, 797 days	234.2
TCGA-C9-A480-01A	0 years, female, asian, stage:Stage III, alive, 386 days	234.2
TCGA-BA-5151-01A	0 years, male, white, stage:Stage IVA, alive, 722 days	234.1
TCGA-D6-A6EK-01A	0 years, male, white, stage:Stage III, alive, 875 days	232.9
TCGA-CV-7425-01A	0 years, female, white, stage:Stage III, dead, 1718 days	231.1
TCGA-CN-6988-01A	0 years, male, white, stage:Stage IVA, alive, 318 days	230.5
TCGA-CN-6989-01A	0 years, male, white, stage:Stage IVA, dead, 980 days	230.2
TCGA-CX-7086-01A	0 years, male, black or african american, stage:Stage III, alive, 573 days	229.6
TCGA-CR-7370-01A	0 years, female, white, stage:'--, alive, 105 days	229.5
TCGA-D6-6826-01A	0 years, female, white, stage:Stage IVA, dead, 348 days	228.4
TCGA-CV-5970-01A	0 years, male, white, stage:Stage IVA, dead, 406 days	228.3
TCGA-CQ-7072-01A	0 years, male, white, stage:Stage II, alive, 2359 days	226.3
TCGA-CR-7401-01A	0 years, male, white, stage:Stage I, alive, 1077 days	225.4
TCGA-CR-7389-01A	0 years, male, black or african american, stage:'--, alive, 392 days	223.8
TCGA-DQ-5629-01A	0 years, male, white, stage:'--, dead, 941 days	223.0
TCGA-HD-8224-01A	0 years, male, white, stage:Stage IVA, dead, 446 days	222.1
TCGA-CN-6010-01A	0 years, male, white, stage:Stage IVA, alive, 1523 days	221.1
TCGA-CQ-7069-01A	0 years, female, white, stage:Stage II, alive, 1274 days	220.9
TCGA-CV-7248-01A	0 years, female, black or african american, stage:Stage IVA, dead, 521 days	219.7
TCGA-CV-A463-01A	0 years, female, white, stage:Stage IVA, dead, 23 days	218.2
TCGA-CN-6013-01A	0 years, male, white, stage:Stage IVA, dead, 727 days	218.1
TCGA-CQ-6227-01A	0 years, male, white, stage:Stage IVA, dead, 129 days	216.9
TCGA-C9-A47Z-01A	0 years, female, asian, stage:Stage III, dead, 191 days	216.7
TCGA-CQ-6228-01A	0 years, female, white, stage:Stage IVA, dead, 456 days	216.7
TCGA-CN-6019-01A	0 years, male, white, stage:Stage IVA, alive, 1038 days	216.6
TCGA-CN-6024-01A	0 years, male, white, stage:Stage IVA, dead, 337 days	216.6
TCGA-D6-A4ZB-01A	0 years, male, white, stage:Stage III, alive, 376 days	216.4
TCGA-CV-6436-01A	0 years, male, white, stage:Stage IVA, alive, 1899 days	216.3
TCGA-CR-7397-01A	0 years, male, white, stage:Stage IVA, alive, 754 days	216.1
TCGA-CV-A6JT-01A	0 years, male, white, stage:Stage II, alive, 852 days	214.4
TCGA-CV-5439-01A	0 years, male, white, stage:Stage IVA, dead, 546 days	214.1
TCGA-CV-A45Y-01A	0 years, male, american indian or alaska native, stage:Stage IVA, dead, 2703 days	213.6
TCGA-CR-7371-01A	0 years, female, white, stage:Stage III, dead, 94 days	212.7
TCGA-CN-4733-01A	0 years, male, white, stage:Stage III, alive, 1586 days	211.9
TCGA-CV-7177-01A	0 years, female, white, stage:Stage II, dead, 663 days	211.0
TCGA-CN-4738-01A	0 years, male, white, stage:Stage IVA, dead, 436 days	208.6
TCGA-CV-A45Z-01A	0 years, male, white, stage:'--, dead, 1466 days	207.5
TCGA-CQ-6222-01A	0 years, male, white, stage:Stage IVA, alive, 2016 days	206.9
TCGA-CQ-7063-01A	0 years, female, white, stage:Stage I, alive, 2133 days	206.1
TCGA-CV-6933-01A	0 years, male, white, stage:Stage III, dead, 2741 days	206.1
TCGA-MT-A67A-01A	0 years, female, white, stage:Stage I, alive, 914 days	204.6
TCGA-CR-7393-01A	0 years, male, white, stage:Stage III, alive, 993 days	203.3
TCGA-QK-A8ZB-01A	0 years, male, black or african american, stage:Stage IVA, alive, 542 days	202.9
TCGA-CQ-6218-01A	0 years, female, white, stage:Stage IVA, alive, 1253 days	202.1
TCGA-CV-7424-01A	0 years, male, asian, stage:Stage IVA, dead, 453 days	201.2
TCGA-F7-A50J-01A	0 years, female, white, stage:Stage III, alive, 947 days	200.5
TCGA-T2-A6X2-01A	0 years, male, white, stage:Stage III, alive, 987 days	199.9
TCGA-CV-6937-01A	0 years, male, white, stage:Stage II, dead, 624 days	199.1
TCGA-P3-A6T0-01A	0 years, female, white, stage:Stage IVA, alive, 578 days	199.1
TCGA-BA-A6DA-01A	0 years, female, white, stage:Stage IVA, alive, 351 days	198.7
TCGA-UF-A71E-01A	0 years, male, white, stage:Stage IVA, dead, 1504 days	197.5
TCGA-CQ-7071-01A	0 years, female, white, stage:Stage III, alive, 1311 days	196.9
TCGA-CV-5435-01A	0 years, male, white, stage:Stage IVA, dead, 2319 days	195.4
TCGA-HD-A6HZ-01A	0 years, female, white, stage:Stage III, alive, 111 days	194.5
TCGA-CX-7219-01A	0 years, male, black or african american, stage:Stage IVA, alive, 1045 days	194.1
TCGA-CV-7101-01A	0 years, male, white, stage:Stage II, dead, 160 days	193.2
TCGA-CV-7423-01A	0 years, male, white, stage:Stage II, dead, 3059 days	188.7
TCGA-CR-6491-01A	0 years, male, black or african american, stage:Stage IVA, alive, 693 days	188.0
TCGA-CN-5360-01A	0 years, male, white, stage:Stage IVA, alive, 2169 days	187.8
TCGA-CN-5355-01A	0 years, male, black or african american, stage:Stage IVA, alive, 1278 days	186.4
TCGA-D6-6516-01A	0 years, male, white, stage:Stage I, alive, 773 days	185.3
TCGA-IQ-A61J-01A	0 years, male, white, stage:Stage IVA, alive, 1021 days	183.8
TCGA-CQ-6221-01A	0 years, male, white, stage:'--, alive, 1000 days	182.8
TCGA-CR-7379-01A	0 years, female, white, stage:Stage IVA, alive, 1036 days	182.8
TCGA-BA-A6DG-01A	0 years, male, white, stage:'--, dead, 69 days	182.3
TCGA-HD-8634-01A	0 years, female, white, stage:Stage I, dead, 385 days	181.5
TCGA-CV-A45V-01A	0 years, female, white, stage:Stage IVA, dead, 32 days	180.4
TCGA-CN-6016-01A	0 years, male, white, stage:Stage IVA, alive, 1443 days	180.4
TCGA-CV-7261-01A	0 years, male, white, stage:Stage IVA, alive, 1512 days	179.9
TCGA-CR-7380-01A	0 years, male, white, stage:Stage IVB, dead, 606 days	176.0
TCGA-BA-6870-01A	0 years, female, black or african american, stage:'--, dead, 451 days	175.0
TCGA-CN-6017-01A	0 years, male, white, stage:Stage IVA, dead, 853 days	170.5
TCGA-CR-7372-01A	0 years, male, white, stage:Stage I, alive, 759 days	169.5
TCGA-CQ-5332-01A	0 years, male, white, stage:Stage III, dead, 317 days	168.4
TCGA-CN-5358-01A	0 years, male, white, stage:Stage II, dead, 261 days	166.5
TCGA-CV-6955-01A	0 years, female, white, stage:Stage II, dead, 334 days	164.3
TCGA-CN-5373-01A	0 years, female, white, stage:Stage I, alive, 1584 days	163.2
TCGA-CN-4737-01A	0 years, male, white, stage:Stage IVA, alive, 625 days	162.6
TCGA-H7-A6C4-01A	0 years, female, white, stage:Stage IVA, dead, 414 days	162.5
TCGA-CV-5440-01A	0 years, male, white, stage:Stage IVA, alive, 3270 days	161.7
TCGA-CV-A6JM-01A	0 years, male, white, stage:'--, dead, 194 days	161.6
TCGA-QK-A6II-01A	0 years, male, white, stage:Stage IVA, dead, 284 days	161.3
TCGA-CQ-A4CE-01A	0 years, female, stage:Stage II, alive, 897 days	160.1
TCGA-CV-A45P-01A	0 years, female, white, stage:Stage I, alive, 639 days	157.9
TCGA-CQ-A4C9-01A	0 years, male, stage:Stage III, alive, 707 days	157.8
TCGA-CN-6012-01A	0 years, male, white, stage:Stage IVA, alive, 1460 days	157.4
TCGA-CN-5356-01A	0 years, male, white, stage:Stage III, alive, 1409 days	156.2
TCGA-IQ-7631-01A	0 years, female, white, stage:Stage II, alive, 1172 days	155.4
TCGA-CR-7390-01A	0 years, male, white, stage:Stage IVA, alive, 1508 days	154.6
TCGA-IQ-7632-01A	0 years, female, white, stage:Stage IVA, alive, 441 days	152.8
TCGA-H7-7774-01A	0 years, female, white, stage:Stage IVA, alive, 407 days	151.7
TCGA-CN-A63V-01A	0 years, male, white, stage:Stage IVA, alive, 679 days	151.5
TCGA-CR-7367-01A	0 years, male, white, stage:Stage IVA, alive, 1440 days	150.3
TCGA-CR-7391-01A	0 years, female, white, stage:Stage I, alive, 913 days	149.8
TCGA-CQ-6223-01A	0 years, male, white, stage:Stage II, alive, 1428 days	149.2
TCGA-CV-A45W-01A	0 years, male, white, stage:Stage II, dead, 1398 days	144.1
TCGA-CV-6962-01A	0 years, male, white, stage:Stage IVA, dead, 126 days	142.3
TCGA-QK-A8Z7-01A	0 years, male, black or african american, stage:Stage IVA, alive, 392 days	142.1
TCGA-UF-A71D-01A	0 years, female, white, stage:Stage IVA, alive, 1461 days	139.5
TCGA-CV-A6JY-01A	0 years, male, white, stage:Stage IVA, alive, 646 days	139.3
TCGA-CV-7250-01A	0 years, male, white, stage:Stage IVA, dead, 2900 days	135.1
TCGA-CV-7430-01A	0 years, male, white, stage:Stage IVA, dead, 495 days	133.4
TCGA-CR-7394-01A	0 years, male, white, stage:Stage IVA, alive, 1346 days	132.7
TCGA-CN-6021-01A	0 years, female, white, stage:'--, dead, 276 days	125.3
TCGA-CN-6992-01A	0 years, male, white, stage:Stage IVA, alive, 1066 days	124.7
TCGA-CN-4722-01A	0 years, female, white, stage:Stage II, alive, 1483 days	122.7
TCGA-CV-A45X-01A	0 years, male, white, stage:Stage IVA, dead, 198 days	122.3
TCGA-CX-7085-01A	0 years, female, white, stage:Stage I, alive, 321 days	121.5
TCGA-CN-6998-01A	0 years, male, white, stage:Stage IVA, dead, 357 days	120.3
TCGA-CV-7183-01A	0 years, male, white, stage:Stage II, alive, 3981 days	117.5
TCGA-CV-6953-01A	0 years, female, white, stage:Stage III, dead, 1641 days	117.0
TCGA-BA-5557-01A	0 years, female, stage:Stage III, alive, 623 days	113.0
TCGA-CV-6935-01A	0 years, male, white, stage:Stage IVA, dead, 295 days	110.2
TCGA-CN-4726-01A	0 years, male, white, stage:Stage IVA, dead, 142 days	104.2
TCGA-CV-7411-01A	0 years, female, white, stage:Stage IVA, dead, 2717 days	98.0
TCGA-CV-A45O-01A	0 years, male, white, stage:'--, alive, 851 days	77.6
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HEAD AND NECK SQUAMOUS CELL CARCINOMA - Protein relative expression (CPTAC)

Number of samples

183

Samples

Sample ID	Sample type	nRPX
C3N-01620-05	Normal	1.0
CPT0235470002	Normal	0.8
CPT0194790003	Tumor	0.8
C3N-00857-05	Normal	0.7
CPT0245410003	Normal	0.7
C3N-01758-04	Normal	0.6
CPT0177010003	Tumor	0.6
CPT0199710003	Normal	0.6
CPT0278700002	Normal	0.6
C3N-01859-04	Normal	0.5
CPT0245140003	Normal	0.5
CPT0195860003	Tumor	0.5
CPT0226030003	Tumor	0.5
CPT0223460003	Normal	0.5
CPT0013460003	Normal	0.5
C3N-00295-05	Normal	0.5
CPT0008960003	Normal	0.5
CPT0281470002	Normal	0.5
CPT0184530003	Tumor	0.5
CPT0226090003	Normal	0.5
C3N-04275-05	Normal	0.4
CPT0163790003	Tumor	0.4
CPT0163650003	Tumor	0.4
CPT0241980004	Tumor	0.4
CPT0236640003	Normal	0.4
CPT0094580003	Normal	0.4
CPT0245730003	Tumor	0.4
CPT0245130003	Tumor	0.4
CPT0229220002	Normal	0.4
CPT0244890004	Tumor	0.4
CPT0163490003	Normal	0.4
CPT0163840003	Tumor	0.3
CPT0088410003	Tumor	0.3
CPT0169640003	Tumor	0.3
CPT0245560003	Normal	0.3
CPT0163860003	Normal	0.3
C3N-02693-06	Normal	0.3
CPT0220620003	Normal	0.3
CPT0226250004	Tumor	0.3
CPT0088430003	Normal	0.3
CPT0163340003	Tumor	0.3
CPT0246620003	Tumor	0.3
CPT0084630009	Tumor	0.3
CPT0237150003	Normal	0.3
C3N-04279-05	Normal	0.3
CPT0201830004	Tumor	0.3
CPT0207870004	Tumor	0.3
CPT0169920003	Normal	0.3
CPT0177200003	Tumor	0.2
CPT0194260003	Normal	0.2
CPT0163430003	Normal	0.2
CPT0163530003	Tumor	0.2
CPT0245460003	Normal	0.2
CPT0163410003	Tumor	0.2
CPT0250310003	Tumor	0.2
CPT0177710003	Tumor	0.2
CPT0226130003	Tumor	0.2
CPT0222200003	Normal	0.2
CPT0163800003	Normal	0.2
CPT0008930003	Tumor	0.2
CPT0237500003	Normal	0.2
CPT0245010003	Tumor	0.2
CPT0013430003	Tumor	0.2
CPT0008520008	Tumor	0.2
CPT0163480003	Tumor	0.2
CPT0094350004	Tumor	0.2
CPT0237620004	Tumor	0.2
CPT0162990004	Tumor	0.1
CPT0095040003	Tumor	0.1
CPT0088080003	Normal	0.1
CPT0242000004	Normal	0.1
CPT0199700003	Tumor	0.1
CPT0222360003	Tumor	0.1
CPT0226270003	Normal	0.1
CPT0094560004	Tumor	0.1
CPT0243140004	Normal	0.1
CPT0169740004	Normal	0.1
CPT0169730003	Tumor	0.1
CPT0190850003	Tumor	0.1
CPT0163910003	Tumor	0.1
CPT0196040003	Tumor	0.1
CPT0226390003	Tumor	0.1
CPT0201860004	Normal	0.1
CPT0163250003	Normal	0.1
CPT0226440003	Tumor	0.1
CPT0094280004	Tumor	0.1
CPT0245020003	Normal	0.1
CPT0195880003	Normal	0.1
CPT0087990003	Tumor	0.1
CPT0245350003	Tumor	0.1
CPT0123280003	Normal	0.1
CPT0169890003	Tumor	0.1
CPT0223450003	Tumor	0.0
CPT0248350003	Normal	0.0
CPT0243090003	Tumor	0.0
CPT0163600003	Tumor	0.0
CPT0163020003	Normal	0.0
C3N-04276-06	Normal	0.0
CPT0226450003	Normal	0.0
CPT0223970003	Tumor	0.0
CPT0123190003	Normal	0.0
CPT0163720003	Normal	0.0
CPT0176770003	Tumor	0.0
CPT0245300003	Tumor	0.0
CPT0177220003	Normal	0.0
CPT0088060004	Tumor	0.0
CPT0245060004	Tumor	-0.1
CPT0194800003	Normal	-0.1
CPT0245550003	Tumor	-0.1
CPT0163170003	Normal	-0.1
CPT0094420004	Tumor	-0.1
CPT0199830003	Normal	-0.1
CPT0245400003	Tumor	-0.1
CPT0226350003	Normal	-0.1
CPT0163740003	Tumor	-0.1
CPT0245190003	Normal	-0.1
CPT0163610003	Normal	-0.1
CPT0237480004	Tumor	-0.2
CPT0084650004	Normal	-0.2
CPT0226400003	Normal	-0.2
CPT0245180003	Tumor	-0.2
CPT0199820003	Tumor	-0.2
CPT0235920003	Normal	-0.2
CPT0194250003	Tumor	-0.2
CPT0248330003	Tumor	-0.2
CPT0222180003	Tumor	-0.2
CPT0196060003	Normal	-0.2
CPT0245450003	Tumor	-0.2
CPT0220610003	Tumor	-0.2
CPT0011290003	Tumor	-0.2
CPT0013000004	Tumor	-0.2
CPT0245500003	Tumor	-0.2
CPT0236870003	Normal	-0.2
CPT0088010003	Normal	-0.2
CPT0013250003	Normal	-0.2
CPT0123260003	Tumor	-0.2
CPT0237640003	Normal	-0.3
CPT0123180003	Tumor	-0.3
CPT0236850004	Tumor	-0.3
CPT0236620003	Tumor	-0.3
CPT0195680003	Tumor	-0.3
CPT0190860003	Normal	-0.3
CPT0162890003	Tumor	-0.3
CPT0194960003	Tumor	-0.3
CPT0248520003	Tumor	-0.3
CPT0162940003	Tumor	-0.3
CPT0246540003	Tumor	-0.4
CPT0163160003	Tumor	-0.4
CPT0261520003	Tumor	-0.4
CPT0246590003	Tumor	-0.4
CPT0199890003	Normal	-0.4
CPT0246670003	Tumor	-0.4
CPT0245230004	Tumor	-0.4
CPT0194420003	Tumor	-0.4
CPT0195700003	Normal	-0.4
CPT0094490004	Tumor	-0.5
CPT0256560003	Tumor	-0.5
CPT0087820003	Tumor	-0.5
CPT0127050003	Tumor	-0.5
CPT0226340003	Tumor	-0.5
CPT0011320003	Normal	-0.5
CPT0245600003	Tumor	-0.5
CPT0237130004	Tumor	-0.5
CPT0196210003	Tumor	-0.5
CPT0163240003	Tumor	-0.6
CPT0177390003	Tumor	-0.6
CPT0013210004	Tumor	-0.6
CPT0199880003	Tumor	-0.6
CPT0008630003	Tumor	-0.7
CPT0163090003	Tumor	-0.7
CPT0013130003	Tumor	-0.7
CPT0235910003	Tumor	-0.8
CPT0011130005	Tumor	-0.8
CPT0245680003	Tumor	-0.8
CPT0244940004	Tumor	-0.8
CPT0235460003	Tumor	-0.9
CPT0245630003	Tumor	-1.1
CPT0024810003	Tumor	-1.4
CPT0013030003	Normal	-1.5
CPT0229230003	Normal	N/A
CPT0169750003	Normal	N/A
CPT0229210003	Tumor	N/A
CPT0229190003	Tumor	N/A
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HEAD AND NECK CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.	Antibody CAB018371
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Squamous cell carcinoma, NOS
Squamous cell carcinoma, NOS Squamous cell carcinoma, metastatic, NOS
Adenocarcinoma, NOS