We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HMGN2 is potential prognostic, high expression is favorable in Cervical Squamous Cell Carcinoma and Endocervical Adenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
524.5
Number of samples
283
Samples
Sample
Description
TPM
TCGA-JX-A3Q8-01A
0 years, female, asian, stage:Stage IB, alive, 1357 days
2317.5
TCGA-EA-A439-01A
0 years, female, asian, stage:Stage IIA, alive, 965 days
2300.3
TCGA-EK-A2RO-01A
0 years, female, american indian or alaska native, stage:Stage IIB, alive, 2 days
2184.4
TCGA-FU-A3WB-01A
0 years, female, white, stage:Stage IIA, alive, 491 days
2038.5
TCGA-VS-A9UD-01A
0 years, female, white, stage:Stage IIIA, alive, 739 days
1960.1
TCGA-EX-A1H5-01A
0 years, female, black or african american, stage:Stage IIB, alive, 619 days
1706.2
TCGA-MY-A5BE-01A
0 years, female, black or african american, stage:Stage IB, alive, 1066 days
1652.1
TCGA-Q1-A6DV-01A
0 years, female, asian, stage:Stage IB, alive, 491 days
1597.0
TCGA-EK-A3GN-01A
0 years, female, white, stage:Stage IIIB, alive, 27 days
1568.4
TCGA-EK-A2RL-01A
0 years, female, black or african american, stage:Stage IB, dead, 1453 days
1428.9
TCGA-C5-A1M6-01A
0 years, female, white, stage:Stage IIB, dead, 955 days
1364.3
TCGA-DS-A0VN-01A
0 years, female, white, stage:Stage IB, alive, 3609 days
1357.2
TCGA-Q1-A73Q-01A
0 years, female, white, stage:Stage I, alive, 284 days
1299.2
TCGA-JW-A5VK-01A
0 years, female, black or african american, stage:Stage IB, alive, 623 days
1285.0
TCGA-Q1-A73R-01A
0 years, female, white, stage:Stage I, alive, 567 days
1225.7
TCGA-VS-A9UV-01A
0 years, female, stage:Stage IVA, dead, 104 days
1220.8
TCGA-EX-A69L-01A
0 years, female, asian, stage:Stage IB, alive, 602 days
1202.4
TCGA-VS-A8EG-01A
0 years, female, stage:Stage IB, alive, 1386 days
1199.9
TCGA-VS-A953-01A
0 years, female, stage:Stage IVA, dead, 477 days
1155.0
TCGA-EK-A2RK-01A
0 years, female, white, stage:Stage IA, alive, 13 days
1152.9
TCGA-EA-A78R-01A
0 years, female, asian, stage:Stage IB, alive, 410 days
1152.0
TCGA-EA-A5FO-01A
0 years, female, white, stage:Stage IB, alive, 815 days
1149.7
TCGA-DG-A2KK-01A
0 years, female, stage:Stage IIIB, alive, 2496 days
1138.7
TCGA-C5-A7CG-01A
0 years, female, white, stage:Stage IB, alive, 6408 days
1119.1
TCGA-DS-A0VM-01A
0 years, female, white, stage:Stage IB, alive, 3589 days
1117.1
TCGA-C5-A2M2-01A
0 years, female, white, stage:Stage IB, dead, 1011 days
1114.8
TCGA-EK-A2R8-01A
0 years, female, white, stage:Stage IB, alive, 44 days
1094.4
TCGA-VS-A9UQ-01A
0 years, female, stage:Stage IB, alive, 1263 days
1089.0
TCGA-C5-A8XK-01A
0 years, female, black or african american, stage:'--, alive, 3039 days
1085.7
TCGA-JX-A5QV-01A
0 years, female, white, stage:Stage IB, alive, 636 days
1076.7
TCGA-EA-A1QT-01A
0 years, female, white, stage:Stage IB, alive, 1243 days
1065.6
TCGA-IR-A3LK-01A
0 years, female, white, stage:Stage IB, dead, 908 days
1065.2
TCGA-C5-A1M7-01A
0 years, female, white, stage:Stage IB, alive, 1409 days
1063.8
TCGA-MA-AA3Z-01A
0 years, female, white, stage:Stage IB, alive, 595 days
1058.7
TCGA-C5-A1M9-01A
0 years, female, white, stage:Stage IB, dead, 1065 days
1055.2
TCGA-EK-A2RC-01A
0 years, female, stage:Stage IB, alive, 129 days
1053.4
TCGA-EX-A449-01A
0 years, female, white, stage:Stage IVB, alive, 447 days
1040.9
TCGA-DG-A2KH-01A
0 years, female, stage:Stage IB, alive, 34 days
1014.9
TCGA-LP-A4AX-01A
0 years, female, asian, stage:Stage IB, alive, 380 days
1013.2
TCGA-VS-A9U7-01A
0 years, female, white, stage:Stage IB, alive, 1472 days
1009.9
TCGA-C5-A1M8-01A
0 years, female, white, stage:Stage IB, alive, 919 days
1002.1
TCGA-FU-A40J-01A
0 years, female, white, stage:Stage IIIB, alive, 426 days
994.7
TCGA-C5-A2LS-01A
0 years, female, white, stage:Stage IB, alive, 1345 days
979.3
TCGA-EK-A2R9-01A
0 years, female, white, stage:Stage IB, alive, 4 days
973.7
TCGA-DS-A7WF-01A
0 years, female, stage:Stage IB, dead, 492 days
966.9
TCGA-Q1-A73P-01A
0 years, female, white, stage:Stage IB, alive, 483 days
966.5
TCGA-VS-A9UZ-01A
0 years, female, white, stage:Stage IB, alive, 2044 days
966.4
TCGA-BI-A20A-01A
0 years, female, white, stage:Stage IB, alive, 720 days
961.6
TCGA-JW-A69B-01A
0 years, female, white, stage:Stage IB, alive, 863 days
957.3
TCGA-C5-A1MH-01A
0 years, female, white, stage:Stage IIIB, dead, 1186 days
952.1
TCGA-BI-A0VR-01A
0 years, female, white, stage:Stage IIIB, alive, 1505 days
948.5
TCGA-HM-A3JJ-01A
0 years, female, black or african american, stage:Stage IB, dead, 659 days
939.5
TCGA-C5-A2M1-01A
0 years, female, white, stage:Stage IB, alive, 1169 days
936.8
TCGA-FU-A770-01A
0 years, female, white, stage:Stage IIIB, alive, 34 days
930.1
TCGA-FU-A3TQ-01A
0 years, female, white, stage:Stage IIIB, alive, 795 days
925.9
TCGA-EA-A44S-01A
0 years, female, white, stage:Stage IIIB, alive, 369 days
920.7
TCGA-DS-A1OD-01A
0 years, female, white, stage:Stage IB, alive, 3874 days
912.2
TCGA-MY-A5BF-01A
0 years, female, white, stage:Stage IIA, alive, 634 days
912.0
TCGA-C5-A8XH-01A
0 years, female, white, stage:Stage IB, dead, 1394 days
908.9
TCGA-IR-A3LF-01A
0 years, female, white, stage:Stage IB, alive, 2949 days
908.1
TCGA-JX-A3Q0-01A
0 years, female, black or african american, stage:Stage III, alive, 6375 days
895.6
TCGA-Q1-A6DW-01A
0 years, female, white, stage:Stage I, alive, 534 days
888.0
TCGA-C5-A7X8-01A
0 years, female, white, stage:Stage IB, alive, 83 days
877.6
TCGA-VS-A8EC-01A
0 years, female, white, stage:Stage IIIB, alive, 1415 days
875.7
TCGA-VS-A9V2-01A
0 years, female, white, stage:Stage IB, alive, 555 days
869.1
TCGA-4J-AA1J-01A
0 years, female, white, stage:Stage IB, alive, 542 days
867.2
TCGA-VS-A9UY-01A
0 years, female, stage:Stage IVB, dead, 555 days
852.3
TCGA-RA-A741-01A
0 years, female, white, stage:Stage IIB, alive, 444 days
850.9
TCGA-C5-A7UE-01A
0 years, female, white, stage:Stage IB, alive, 4738 days
845.0
TCGA-C5-A8ZZ-01A
0 years, female, white, stage:Stage IIB, alive, 636 days
844.5
TCGA-HM-A4S6-01A
0 years, female, white, stage:Stage IIIB, alive, 454 days
844.1
TCGA-MA-AA43-01A
0 years, female, white, stage:Stage IIIB, alive, 346 days
828.5
TCGA-C5-A1BL-01A
0 years, female, white, stage:Stage IB, alive, 5271 days
828.1
TCGA-DG-A2KL-01A
0 years, female, stage:Stage IIA, alive, 1367 days
813.0
TCGA-C5-A902-01A
0 years, female, black or african american, stage:Stage IB, alive, 149 days
810.3
TCGA-EA-A5ZD-01A
0 years, female, asian, stage:Stage IB, alive, 830 days
805.3
TCGA-Q1-A5R2-01A
0 years, female, white, stage:'--, alive, 499 days
805.0
TCGA-VS-A9UR-01A
0 years, female, white, stage:Stage IIA, alive, 793 days
798.0
TCGA-C5-A8YT-01A
0 years, female, white, stage:Stage IB, dead, 633 days
790.5
TCGA-MU-A5YI-01A
0 years, female, black or african american, stage:Stage IA, alive, 1053 days
783.3
TCGA-EK-A3GK-01A
0 years, female, white, stage:Stage IB, alive, 15 days
780.2
TCGA-EA-A6QX-01A
0 years, female, asian, stage:Stage IIIB, alive, 730 days
776.7
TCGA-DS-A0VL-01A
0 years, female, white, stage:Stage IB, dead, 1692 days
774.7
TCGA-Q1-A73S-01A
0 years, female, white, stage:Stage IB, alive, 688 days
772.2
TCGA-DR-A0ZL-01A
0 years, female, asian, stage:Stage IB, alive, 2669 days
770.6
TCGA-EA-A4BA-01A
0 years, female, white, stage:Stage IB, alive, 755 days
769.5
TCGA-VS-A8Q9-01A
0 years, female, white, stage:Stage IB, alive, 1630 days
768.9
TCGA-EA-A411-01A
0 years, female, white, stage:Stage IB, alive, 747 days
763.7
TCGA-VS-A9UB-01A
0 years, female, stage:Stage IIB, alive, 911 days
762.8
TCGA-EK-A3GJ-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IB, alive, 3 days
762.7
TCGA-EA-A97N-01A
0 years, female, white, stage:Stage IB, alive, 11 days
762.4
TCGA-C5-A8XJ-01A
0 years, female, white, stage:Stage IB, alive, 4467 days
754.5
TCGA-LP-A5U3-01A
0 years, female, asian, stage:Stage IB, alive, 25 days
748.6
TCGA-VS-A9UM-01A
0 years, female, black or african american, stage:Stage IVB, dead, 829 days
725.1
TCGA-C5-A7UI-01A
0 years, female, black or african american, stage:Stage IB, dead, 2888 days
721.1
TCGA-C5-A8XI-01A
0 years, female, black or african american, stage:Stage IB, alive, 254 days
720.9
TCGA-C5-A1BM-01A
0 years, female, black or african american, stage:Stage IB, dead, 2520 days
718.4
TCGA-EA-A3QD-01A
0 years, female, white, stage:Stage IIIB, alive, 397 days
710.3
TCGA-IR-A3LI-01A
0 years, female, white, stage:Stage IVB, alive, 2493 days
703.3
TCGA-BI-A0VS-01A
0 years, female, white, stage:Stage IB, alive, 1735 days
701.7
TCGA-LP-A5U2-01A
0 years, female, asian, stage:Stage IIIB, alive, 9 days
684.3
TCGA-C5-A3HL-01A
0 years, female, white, stage:Stage IB, alive, 621 days
682.4
TCGA-VS-A958-01A
0 years, female, white, stage:Stage IIB, alive, 1525 days
681.0
TCGA-EK-A2RB-01A
0 years, female, white, stage:Stage IVB, alive, 9 days
674.3
TCGA-VS-A952-01A
0 years, female, white, stage:Stage IB, alive, 1778 days
674.2
TCGA-XS-A8TJ-01A
0 years, female, black or african american, stage:Stage IB, alive, 890 days
671.5
TCGA-C5-A7XC-01A
0 years, female, white, stage:Stage IB, alive, 1551 days
670.6
TCGA-EA-A3Y4-01A
0 years, female, white, stage:Stage IB, alive, 1122 days
669.9
TCGA-JW-A5VL-01A
0 years, female, american indian or alaska native, stage:Stage IB, alive, 474 days
663.4
TCGA-MU-A51Y-01A
0 years, female, white, stage:Stage IIA, alive, 854 days
660.4
TCGA-C5-A907-01A
0 years, female, white, stage:Stage IB, alive, 448 days
656.2
TCGA-VS-A94Z-01A
0 years, female, white, stage:Stage IIB, alive, 1015 days
653.5
TCGA-C5-A1MK-01A
0 years, female, white, stage:Stage IIIB, dead, 74 days
644.2
TCGA-C5-A7CO-01A
0 years, female, white, stage:Stage IB, alive, 4482 days
632.4
TCGA-ZJ-AAX4-01A
0 years, female, white, stage:Stage II, alive, 21 days
630.1
TCGA-R2-A69V-01A
0 years, female, white, stage:Stage IB, alive, 596 days
629.6
TCGA-VS-A9U6-01A
0 years, female, white, stage:Stage IVB, alive, 1320 days
624.1
TCGA-MA-AA42-01A
0 years, female, white, stage:Stage IIB, alive, 259 days
623.9
TCGA-VS-A950-01A
0 years, female, stage:Stage IIIA, alive, 1221 days
622.3
TCGA-C5-A7CH-01A
0 years, female, white, stage:Stage IIB, alive, 4694 days
617.2
TCGA-HG-A2PA-01A
0 years, female, white, stage:Stage IB, dead, 773 days
615.4
TCGA-VS-AA62-01A
0 years, female, white, stage:Stage IIB, dead, 469 days
613.3
TCGA-Q1-A5R3-01A
0 years, female, white, stage:'--, alive, 485 days
612.5
TCGA-ZJ-A8QR-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage I, dead, 582 days
610.2
TCGA-IR-A3LL-01A
0 years, female, white, stage:Stage IB, alive, 1106 days
607.5
TCGA-EK-A2PG-01A
0 years, female, black or african american, stage:'--, alive, 46 days
601.6
TCGA-IR-A3LB-01A
0 years, female, white, stage:Stage IB, dead, 2032 days
598.3
TCGA-C5-A7CK-01A
0 years, female, white, stage:Stage IVA, dead, 4086 days
598.1
TCGA-VS-A9UI-01A
0 years, female, white, stage:Stage IIB, dead, 1372 days
595.6
TCGA-LP-A4AU-01A
0 years, female, asian, stage:Stage IIIB, alive, 343 days
591.2
TCGA-C5-A1MF-01A
0 years, female, white, stage:Stage IB, alive, 1617 days
590.4
TCGA-DS-A5RQ-01A
0 years, female, white, stage:Stage IB, alive, 512 days
588.9
TCGA-EK-A2PK-01A
0 years, female, white, stage:Stage IB, alive, 12 days
583.3
TCGA-IR-A3LA-01A
0 years, female, white, stage:Stage IB, alive, 4172 days
575.4
TCGA-HM-A6W2-01A
0 years, female, black or african american, stage:Stage IVB, alive, 287 days
547.6
TCGA-VS-A9V4-01A
0 years, female, white, stage:Stage IVA, dead, 132 days
547.2
TCGA-MU-A8JM-01A
0 years, female, white, stage:Stage IB, alive, 607 days
535.2
TCGA-VS-A8QM-01A
0 years, female, stage:Stage IVB, dead, 951 days
524.6
TCGA-VS-A8EL-01A
0 years, female, black or african american, stage:Stage IIB, alive, 1992 days
522.6
TCGA-MY-A913-01A
0 years, female, black or african american, stage:Stage IIA, alive, 524 days
522.5
TCGA-DS-A1OB-01A
0 years, female, white, stage:Stage IB, dead, 861 days
512.0
TCGA-VS-A9UH-01A
0 years, female, black or african american, stage:Stage IVA, alive, 1427 days
511.7
TCGA-EK-A2H1-01A
0 years, female, white, stage:Stage IB, alive, 799 days
509.7
TCGA-EK-A2RM-01A
0 years, female, white, stage:Stage IB, alive, 50 days
507.0
TCGA-C5-A7UC-01A
0 years, female, white, stage:Stage IB, dead, 523 days
494.4
TCGA-VS-A9UJ-01A
0 years, female, stage:Stage IIB, dead, 52 days
489.3
TCGA-C5-A905-01A
0 years, female, black or african american, stage:Stage IB, alive, 4879 days
488.5
TCGA-EX-A8YF-01A
0 years, female, white, stage:Stage IB, alive, 473 days
486.6
TCGA-EA-A410-01A
0 years, female, white, stage:Stage IIA, alive, 803 days
483.3
TCGA-FU-A3HY-01A
0 years, female, white, stage:Stage IB, alive, 954 days
482.5
TCGA-FU-A23L-01A
0 years, female, white, stage:Stage IIA, alive, 725 days
481.1
TCGA-C5-A1MI-01A
0 years, female, white, stage:Stage IB, dead, 1083 days
480.1
TCGA-Q1-A73O-01A
0 years, female, stage:Stage IB, alive, 428 days
473.1
TCGA-FU-A57G-01A
0 years, female, white, stage:Stage IB, alive, 1078 days
471.8
TCGA-FU-A3EO-01A
0 years, female, white, stage:Stage IIB, alive, 490 days
467.4
TCGA-ZX-AA5X-01A
0 years, female, white, stage:Stage IIIB, alive, 119 days
461.3
TCGA-C5-A7UH-01A
0 years, female, white, stage:Stage IIIB, alive, 3988 days
456.8
TCGA-VS-A8QF-01A
0 years, female, white, stage:Stage IIB, alive, 1800 days
456.6
TCGA-WL-A834-01A
0 years, female, white, stage:'--, alive, 791 days
449.9
TCGA-DS-A1OA-01A
0 years, female, asian, stage:Stage IB, dead, 879 days
441.9
TCGA-C5-A1MQ-01A
0 years, female, white, stage:Stage IIA, alive, 1031 days
438.5
TCGA-VS-A9UO-01A
0 years, female, white, stage:Stage IIB, alive, 1456 days
429.8
TCGA-FU-A3YQ-01A
0 years, female, white, stage:Stage IB, alive, 861 days
424.4
TCGA-C5-A1MN-01A
0 years, female, white, stage:Stage IIIB, dead, 1245 days
423.7
TCGA-FU-A5XV-01A
0 years, female, white, stage:Stage IIIB, alive, 321 days
421.6
TCGA-2W-A8YY-01A
0 years, female, white, stage:Stage IB, alive, 533 days
405.3
TCGA-EA-A3QE-01A
0 years, female, white, stage:Stage IB, alive, 761 days
388.9
TCGA-VS-A94Y-01A
0 years, female, white, stage:Stage IIB, dead, 144 days
387.7
TCGA-VS-A9UC-01A
0 years, female, stage:Stage IIB, alive, 825 days
385.2
TCGA-EX-A3L1-01A
0 years, female, white, stage:Stage IIA, alive, 463 days
382.3
TCGA-DS-A3LQ-01A
0 years, female, stage:Stage IIIB, alive, 699 days
369.5
TCGA-EK-A2GZ-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 383 days
364.4
TCGA-EA-A50E-01A
0 years, female, asian, stage:Stage IVA, dead, 227 days
359.3
TCGA-VS-A8EK-01A
0 years, female, white, stage:Stage IVA, dead, 829 days
358.1
TCGA-DG-A2KM-01A
0 years, female, stage:Stage IB, alive, 1946 days
356.8
TCGA-EK-A2PM-01A
0 years, female, white, stage:Stage IIB, alive, 18 days
348.0
TCGA-EK-A2RE-01A
0 years, female, white, stage:Stage IIA, alive, 57 days
345.3
TCGA-VS-A9V3-01A
0 years, female, white, stage:Stage IVB, alive, 540 days
327.4
TCGA-UC-A7PG-01A
0 years, female, white, stage:Stage IIIB, dead, 370 days
316.6
TCGA-EA-A3HR-01A
0 years, female, white, stage:Stage II, alive, 940 days
299.2
TCGA-EK-A2H0-01A
0 years, female, white, stage:Stage IIB, alive, 1847 days
282.0
TCGA-VS-A8QH-01A
0 years, female, white, stage:Stage IB, dead, 1210 days
280.8
TCGA-C5-A2LT-01A
0 years, female, white, stage:Stage IB, alive, 2226 days
270.8
TCGA-EK-A2IR-01A
0 years, female, white, stage:Stage IB, alive, 3442 days
243.5
TCGA-EK-A2RJ-01A
0 years, female, white, stage:Stage IB, alive, 53 days
183.4
TCGA-MA-AA3X-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 617 days
181.1
TCGA-EA-A5O9-01A
0 years, female, white, stage:Stage IB, alive, 788 days
176.8
TCGA-C5-A8YQ-01A
0 years, female, white, stage:Stage IB, dead, 715 days
128.2
TCGA-FU-A3TX-01A
0 years, female, stage:Stage IB, alive, 45 days
60.4
TCGA-EA-A3HT-01A
0 years, female, white, stage:Stage IB, alive, 954 days
59.1
TCGA-EK-A2R7-01A
0 years, female, white, stage:Stage IB, alive, 27 days
57.2
TCGA-EK-A2RA-01A
0 years, female, stage:Stage IIA, alive, 1246 days
47.6
TCGA-VS-A9UP-01A
0 years, female, stage:Stage IIA, alive, 1444 days
40.0
TCGA-VS-A959-01A
0 years, female, stage:Stage IIB, alive, 1561 days
34.3
TCGA-VS-A94W-01A
0 years, female, white, stage:Stage IIB, alive, 1243 days
33.5
TCGA-FU-A23K-01A
0 years, female, white, stage:Stage IIIB, alive, 372 days
30.5
TCGA-C5-A1ME-01A
0 years, female, white, stage:Stage IB, alive, 1756 days
30.4
TCGA-C5-A2LV-01A
0 years, female, black or african american, stage:Stage IB, alive, 2234 days
30.0
TCGA-C5-A2LX-01A
0 years, female, white, stage:Stage IB, alive, 2526 days
29.4
TCGA-EK-A2IP-01A
0 years, female, white, stage:Stage IB, alive, 202 days
29.3
TCGA-MY-A5BD-01A
0 years, female, white, stage:Stage IIB, alive, 1667 days
28.6
TCGA-EK-A2PI-01A
0 years, female, white, stage:Stage IIIB, alive, 586 days
28.0
TCGA-ZJ-AAXA-01A
0 years, female, white, stage:Stage IB, alive, 43 days
27.4
TCGA-LP-A7HU-01A
0 years, female, asian, stage:Stage II, alive, 406 days
27.4
TCGA-EA-A556-01A
0 years, female, white, stage:Stage IB, alive, 453 days
25.9
TCGA-VS-A954-01A
0 years, female, stage:Stage IIIB, alive, 1714 days
24.7
TCGA-Q1-A5R1-01A
0 years, female, white, stage:Stage IB, alive, 474 days
23.8
TCGA-C5-A7CL-01A
0 years, female, white, stage:Stage IIIB, dead, 471 days
23.7
TCGA-JW-A852-01A
0 years, female, white, stage:Stage IIB, dead, 252 days
23.2
TCGA-IR-A3L7-01A
0 years, female, white, stage:Stage IB, alive, 4483 days
22.0
TCGA-VS-A8QC-01A
0 years, female, white, stage:Stage IVA, dead, 350 days
21.1
TCGA-C5-A2LY-01A
0 years, female, white, stage:Stage IB, alive, 2383 days
21.1
TCGA-UC-A7PF-01A
0 years, female, stage:Stage IB, dead, 2859 days
20.5
TCGA-Q1-A6DT-01A
0 years, female, white, stage:Stage I, dead, 275 days
20.4
TCGA-EX-A69M-01A
0 years, female, white, stage:Stage IB, dead, 253 days
20.3
TCGA-IR-A3LC-01A
0 years, female, white, stage:Stage IB, alive, 3935 days
19.7
TCGA-C5-A1M5-01A
0 years, female, white, stage:Stage IB, dead, 2052 days
19.5
TCGA-JW-AAVH-01A
0 years, female, white, stage:Stage IB, alive, 552 days
19.2
TCGA-C5-A2LZ-01A
0 years, female, white, stage:Stage IIIB, dead, 3046 days
19.1
TCGA-EA-A5ZF-01A
0 years, female, asian, stage:Stage IB, alive, 828 days
18.9
TCGA-UC-A7PI-01A
0 years, female, white, stage:Stage IB, alive, 2114 days
17.6
TCGA-DG-A2KJ-01A
0 years, female, stage:Stage IIIB, alive, 2893 days
17.1
TCGA-C5-A7CM-01A
0 years, female, white, stage:Stage IB, alive, 619 days
16.0
TCGA-EA-A43B-01A
0 years, female, white, stage:Stage IB, alive, 791 days
15.1
TCGA-C5-A1BJ-01A
0 years, female, white, stage:Stage IIB, alive, 4385 days
14.8
TCGA-MA-AA3W-01A
0 years, female, white, stage:Stage IB, alive, 685 days
14.7
TCGA-C5-A3HF-01A
0 years, female, white, stage:Stage IB, dead, 543 days
14.5
TCGA-ZJ-AAXU-01A
0 years, female, white, stage:Stage IIB, alive, 5 days
14.4
TCGA-VS-A9UL-01A
0 years, female, white, stage:Stage IIIB, dead, 442 days
14.2
TCGA-C5-A901-01A
0 years, female, white, stage:'--, alive, 518 days
13.9
TCGA-DS-A0VK-01A
0 years, female, white, stage:Stage IB, dead, 1118 days
13.3
TCGA-JX-A3PZ-01A
0 years, female, white, stage:Stage IB, dead, 642 days
13.3
TCGA-UC-A7PD-01A
0 years, female, american indian or alaska native, stage:Stage IB, dead, 355 days
12.7
TCGA-IR-A3LH-01A
0 years, female, black or african american, stage:Stage IIA, alive, 2394 days
12.5
TCGA-C5-A8YR-01A
0 years, female, white, stage:Stage IB, dead, 837 days
12.4
TCGA-EK-A2PL-01A
0 years, female, white, stage:Stage IIIB, alive, 13 days
12.2
TCGA-EA-A5ZE-01A
0 years, female, asian, stage:Stage IB, alive, 829 days
11.7
TCGA-VS-A8QA-01A
0 years, female, stage:Stage IB, alive, 1099 days
10.8
TCGA-HM-A3JK-01A
0 years, female, white, stage:Stage IIA, alive, 632 days
10.8
TCGA-VS-A8EB-01A
0 years, female, white, stage:Stage IIIB, dead, 305 days
10.5
TCGA-VS-A8Q8-01A
0 years, female, white, stage:Stage IB, dead, 978 days
10.2
TCGA-PN-A8MA-01A
0 years, female, black or african american, stage:Stage IIB, alive, 90 days
9.8
TCGA-C5-A1ML-01A
0 years, female, white, stage:Stage IB, dead, 636 days
9.8
TCGA-C5-A0TN-01A
0 years, female, black or african american, stage:Stage IB, dead, 348 days
9.6
TCGA-VS-A94X-01A
0 years, female, black or african american, stage:Stage IIB, dead, 506 days
9.3
TCGA-DS-A7WH-01A
0 years, female, white, stage:Stage IB, alive, 533 days
9.3
TCGA-EA-A3HQ-01A
0 years, female, white, stage:Stage II, alive, 1136 days
9.0
TCGA-MA-AA3Y-01A
0 years, female, white, stage:Stage IB, alive, 542 days
9.0
TCGA-DS-A7WI-01A
0 years, female, white, stage:Stage IIA, dead, 252 days
8.7
TCGA-VS-A9UT-01A
0 years, female, asian, stage:Stage IB, alive, 482 days
8.7
TCGA-DS-A1O9-01A
0 years, female, white, stage:Stage IVA, dead, 266 days
7.5
TCGA-VS-A9UU-01A
0 years, female, stage:Stage IIB, alive, 442 days
7.3
TCGA-MA-AA41-01A
0 years, female, white, stage:Stage IIB, alive, 279 days
7.0
TCGA-DS-A1OC-01A
0 years, female, white, stage:Stage IB, alive, 376 days
6.9
TCGA-JW-A5VH-01A
0 years, female, american indian or alaska native, stage:Stage IVB, dead, 100 days
6.9
TCGA-GH-A9DA-01A
0 years, female, white, stage:Stage IB, alive, 540 days
6.9
TCGA-EA-A1QS-01A
0 years, female, white, stage:Stage IB, alive, 1203 days
6.6
TCGA-JW-A5VG-01A
0 years, female, american indian or alaska native, stage:Stage IIA, alive, 834 days
6.5
TCGA-ZJ-A8QQ-01A
0 years, female, white, stage:Stage IIB, alive, 2056 days
6.4
TCGA-DR-A0ZM-01A
0 years, female, white, stage:Stage IIIB, alive, 1791 days
6.1
TCGA-JW-A5VJ-01A
0 years, female, american indian or alaska native, stage:Stage IIB, alive, 652 days
6.0
TCGA-EA-A3HU-01A
0 years, female, white, stage:Stage II, alive, 1013 days
5.5
TCGA-VS-A8EJ-01A
0 years, female, white, stage:Stage IIB, dead, 607 days
5.3
TCGA-FU-A3HZ-01A
0 years, female, white, stage:Stage IIA, alive, 1103 days
5.2
TCGA-C5-A7CJ-01A
0 years, female, white, stage:Stage IIA, dead, 3097 days
4.8
TCGA-C5-A1MP-01A
0 years, female, black or african american, stage:Stage IB, alive, 109 days
4.6
TCGA-JW-A5VI-01A
0 years, female, american indian or alaska native, stage:Stage IIB, alive, 747 days
4.4
TCGA-EK-A2RN-01A
0 years, female, white, stage:Stage IB, alive, 71 days
3.8
TCGA-C5-A1MJ-01A
0 years, female, white, stage:Stage IB, dead, 14 days
2.4
TCGA-EA-A3HS-01A
0 years, female, white, stage:Stage IB, alive, 959 days
2.3
TCGA-VS-A9U5-01A
0 years, female, white, stage:Stage IIB, alive, 1535 days
0.0
TCGA-FU-A3NI-01A
0 years, female, white, stage:Stage IB, dead, 638 days
0.0
TCGA-C5-A7X5-01A
0 years, female, black or african american, stage:Stage IVB, dead, 414 days
0.0
TCGA-VS-A9V1-01A
0 years, female, white, stage:Stage IVB, dead, 157 days
0.0
TCGA-VS-A957-01A
0 years, female, white, stage:Stage IB, alive, 1688 days
0.0
TCGA-C5-A3HE-01A
0 years, female, white, stage:Stage IB, alive, 548 days
0.0
TCGA-LP-A4AW-01A
0 years, female, asian, stage:Stage IA, alive, 27 days
0.0
TCGA-FU-A2QG-01A
0 years, female, white, stage:Stage IB, alive, 579 days
0.0
TCGA-VS-A9V5-01A
0 years, female, white, stage:Stage IIB, dead, 494 days
0.0
TCGA-VS-A8EH-01A
0 years, female, stage:Stage IIIB, alive, 986 days
0.0
TCGA-VS-A9V0-01A
0 years, female, stage:Stage IB, alive, 573 days
0.0
TCGA-C5-A7X3-01A
0 years, female, white, stage:Stage IIIB, dead, 284 days
0.0
TCGA-VS-A8EI-01A
0 years, female, white, stage:Stage IIB, alive, 729 days
0.0
Show allShow less
CERVICAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.