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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PCBP2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1754.9
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
9387.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
7709.1
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
7270.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
7035.3
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
6003.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
5399.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
5388.8
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
5335.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
5151.2
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
4473.2
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
4391.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
3885.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
3713.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
3263.1
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
3221.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
2917.3
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
2600.5
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
1777.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
1493.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
1067.8
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
1008.2
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
959.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
850.2
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
698.5
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
684.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
680.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
667.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
657.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
649.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
606.5
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
606.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
594.4
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
581.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
558.3
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
530.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
524.8
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
506.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
494.5
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
485.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
463.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
457.2
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
438.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
424.5
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
421.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
403.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
402.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
385.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
381.3
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
377.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
375.6
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
370.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
353.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
321.4
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
311.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
310.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
300.6
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
298.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
295.6
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
263.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
252.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
252.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
226.0
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
203.9
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PCBP2 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
569.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
1363.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
1185.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
1175.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
1094.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
1091.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
1018.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
1013.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
981.1
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
970.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
966.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
935.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
911.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
905.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
904.7
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
904.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
902.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
895.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
894.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
894.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
886.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
880.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
874.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
874.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
873.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
865.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
865.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
861.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
858.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
857.8
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
856.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
853.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
850.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
848.6
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
845.9
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
845.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
844.9
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
844.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
844.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
843.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
841.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
839.5
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
838.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
836.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
834.1
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
832.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
832.3
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
830.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
830.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
829.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
828.1
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
826.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
825.5
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
824.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
822.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
822.1
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
821.6
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
821.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
819.6
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
811.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
809.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
809.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
808.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
806.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
805.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
804.9
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
801.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
799.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
798.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
793.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
791.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
789.8
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
789.1
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
788.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
788.1
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
783.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
783.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
783.5
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
780.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
779.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
779.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
774.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
773.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
771.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
768.7
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
767.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
767.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
763.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
759.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
759.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
758.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
756.0
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
755.9
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
755.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
752.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
751.5
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
751.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
750.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
750.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
750.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
749.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
748.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
746.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
745.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
744.6
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
744.6
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
742.7
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
738.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
737.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
736.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
732.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
732.3
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
730.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
730.2
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
729.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
727.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
727.1
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
726.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
725.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
724.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
722.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
720.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
717.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
717.4
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
717.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
717.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
715.8
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
715.0
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
714.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
714.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
713.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
711.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
711.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
711.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
711.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
710.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
710.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
708.2
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
699.3
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
699.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
696.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
694.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
694.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
693.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
692.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
692.2
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
692.0
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
691.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
684.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
684.3
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
683.9
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
683.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
680.7
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
680.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
679.0
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
678.9
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
677.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
677.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
676.9
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
674.2
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
674.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
674.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
674.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
672.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
671.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
670.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
670.0
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
668.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
668.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
668.0
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
666.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
665.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
664.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
664.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
663.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
661.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
661.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
660.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
660.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
658.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
655.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
654.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
653.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
653.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
653.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
651.1
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
650.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
649.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
649.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
648.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
648.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
645.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
644.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
639.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
638.4
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
637.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
636.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
636.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
635.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
635.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
635.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
634.4
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
634.1
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
633.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
632.6
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
631.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
631.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
630.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
628.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
627.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
625.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
625.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
623.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
623.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
621.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
621.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
618.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
616.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
612.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
611.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
611.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
609.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
608.6
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
608.4
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
607.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
607.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
606.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
606.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
605.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
605.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
604.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
604.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
604.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
600.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
600.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
600.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
597.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
596.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
595.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
594.0
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
592.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
592.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
592.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
591.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
590.9
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
589.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
589.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
589.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
589.1
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
586.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
586.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
585.8
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
585.1
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
583.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
582.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
581.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
580.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
579.6
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
578.8
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
577.8
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
577.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
577.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
576.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
574.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
574.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
570.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
568.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
567.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
564.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
564.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
563.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
562.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
562.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
561.9
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
560.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
559.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
559.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
559.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
556.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
556.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
556.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
555.5
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
554.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
552.7
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
552.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
551.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
550.4
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
550.0
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
549.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
546.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
544.9
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
544.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
542.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
542.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
541.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
540.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
538.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
538.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
538.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
537.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
535.7
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
535.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
535.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
534.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
533.9
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
533.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
533.6
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
533.6
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
532.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
530.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
530.7
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
529.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
529.3
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
528.3
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
528.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
526.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
526.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
525.6
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
525.6
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
525.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
524.0
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
523.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
522.4
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
520.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
520.2
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
520.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
518.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
515.9
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
514.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
514.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
509.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
509.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
508.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
504.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
503.7
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
501.0
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
500.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
500.1
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
497.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
496.9
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
495.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
493.9
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
491.6
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
490.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
490.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
489.3
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
487.0
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
484.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
484.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
484.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
483.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
478.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
478.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
478.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
475.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
475.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
474.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
474.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
474.4
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
474.2
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
473.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
471.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
467.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
467.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
466.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
465.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
464.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
462.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
462.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
462.0
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
461.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
461.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
461.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
460.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
457.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
456.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
456.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
455.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
454.5
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
454.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
452.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
451.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
448.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
446.6
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
443.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
443.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
443.1
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
441.1
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
441.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
438.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
436.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
435.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
434.4
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
434.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
432.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
431.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
430.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
430.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
428.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
426.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
425.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
422.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
421.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
419.2
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
417.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
415.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
415.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
411.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
411.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
409.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
408.9
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
408.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
407.6
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
406.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
405.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
404.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
398.7
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
397.3
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
395.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
392.7
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
391.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
386.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
385.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
385.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
385.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
385.2
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
382.7
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
380.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
375.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
374.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
371.3
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
370.3
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
370.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
366.7
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
365.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
365.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
361.3
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
360.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
360.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
359.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
354.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
352.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
351.4
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
351.2
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
349.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
346.5
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
340.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
336.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
335.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
335.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
332.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
330.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
329.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
320.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
311.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
311.3
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
309.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
309.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
308.9
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
306.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
305.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
304.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
304.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
304.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
303.8
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
303.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
302.7
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
301.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
301.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
298.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
288.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
288.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
278.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
275.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
275.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
275.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
273.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
272.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
269.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
268.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
266.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
266.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
265.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
262.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
258.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
255.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
252.8
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
249.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
244.6
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
240.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
237.0
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
236.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
231.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
231.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
230.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
229.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
228.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
226.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
224.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
223.6
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
220.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
213.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
213.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
208.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
202.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
197.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
195.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
195.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
188.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
166.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
164.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
164.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
163.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
163.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
156.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
142.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
140.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
137.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
132.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
130.8
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
127.6
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PCBP2 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
501.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
833.8
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
821.8
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
820.5
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
815.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
742.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
728.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
723.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
712.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
709.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
704.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
678.0
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
665.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
648.6
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
641.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
616.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
616.6
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
607.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
600.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
597.4
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
591.1
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
588.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
588.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
587.0
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
586.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
581.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
577.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
573.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
572.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
570.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
564.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
559.3
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
557.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
556.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
552.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
547.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
545.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
544.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
538.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
535.2
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
535.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
532.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
531.5
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
530.1
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
528.7
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
526.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
523.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
514.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
507.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
505.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
501.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
500.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
500.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
497.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
492.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
487.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
486.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
481.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
470.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
469.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
468.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
468.4
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
467.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
466.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
460.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
457.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
454.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
451.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
448.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
445.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
441.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
429.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
413.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
412.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
409.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
405.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
402.3
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
395.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
390.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
389.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
382.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
380.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
374.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
369.5
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
352.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
350.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
348.8
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
347.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
341.9
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
341.5
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
341.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
337.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
332.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
329.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
325.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
307.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
278.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
269.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
269.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
210.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PCBP2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1129.8
Number of samples
282
Samples
Sample
Description
TPM
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
10247.3
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
7048.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
6974.3
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
6405.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
6325.4
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
6275.8
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
5976.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
5534.9
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
5480.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
5454.1
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
5307.1
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
5306.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
5172.6
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
4927.3
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
4763.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
4742.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
4709.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
4707.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
4704.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
4687.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
4641.8
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
4625.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
4352.8
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
4066.2
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
3990.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
3826.2
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
3660.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
3544.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
3523.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
3375.8
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
3226.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
3224.3
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
3082.1
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
3078.2
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
3049.7
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
2992.7
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
2990.5
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
2940.8
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
2878.6
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
2741.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
2736.7
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
2570.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
2493.8
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
2415.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
2273.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
2142.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
2124.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
2081.2
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
2069.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
2029.6
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
2006.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
1974.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
1893.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
1676.5
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
1606.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
1442.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
1434.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
1423.3
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
1362.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
1226.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
1076.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
1017.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
957.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
934.9
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
921.4
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
899.9
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
889.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
888.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
866.6
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
835.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
826.4
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
814.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
766.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
766.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
715.4
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
714.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
702.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
693.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
686.3
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
683.0
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
682.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
675.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
664.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
641.7
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
638.3
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
635.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
631.1
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
617.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
612.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
608.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
607.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
607.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
606.0
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
596.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
588.5
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
584.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
580.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
574.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
573.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
569.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
567.2
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
563.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
557.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
556.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
550.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
549.0
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
548.7
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
547.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
544.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
543.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
542.9
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
541.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
539.3
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
536.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
534.7
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
522.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
519.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
518.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
518.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
517.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
514.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
512.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
501.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
495.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
492.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
486.8
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
483.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
483.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
477.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
474.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
473.5
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
470.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
469.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
469.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
465.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
465.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
462.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
461.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
461.7
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
461.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
460.1
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
458.5
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
457.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
453.0
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
448.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
448.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
445.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
445.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
441.7
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
441.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
441.0
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
439.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
439.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
438.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
438.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
431.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
429.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
428.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
424.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
424.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
423.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
422.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
421.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
421.4
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
420.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
418.4
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
416.4
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
414.6
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
414.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
414.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
413.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
413.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
411.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
402.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
401.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
400.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
400.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
395.7
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
393.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
393.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
391.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
389.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
389.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
389.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
388.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
386.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
385.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
382.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
380.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
375.8
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
374.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
373.2
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
371.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
369.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
368.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
368.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
367.3
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
366.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
365.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
364.4
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
362.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
360.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
358.0
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
357.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
357.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
356.8
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
355.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
352.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
352.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
350.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
347.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
342.1
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
340.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
333.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
330.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
330.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
320.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
317.3
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
316.4
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
313.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
312.9
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
310.8
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
310.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
310.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
309.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
307.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
306.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
305.3
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
301.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
300.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
300.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
300.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
299.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
295.8
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
294.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
280.5
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
271.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
270.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
264.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
261.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
259.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
255.9
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
253.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
249.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
244.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
243.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
243.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
243.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
243.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
240.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
235.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
231.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
228.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
227.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
222.0
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
221.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
218.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
218.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
216.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
214.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
213.3
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
211.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
202.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
201.6
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
201.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
199.8
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
184.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
181.3
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
177.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
174.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
171.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
168.6
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
167.5
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
165.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
154.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
143.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
141.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
134.5
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
129.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
115.9
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
102.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
100.8
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001340003
Tumor
0.4
CPT0012180003
Tumor
0.4
CPT0088970003
Tumor
0.4
CPT0017410003
Tumor
0.4
CPT0079180003
Tumor
0.3
CPT0017850003
Tumor
0.3
CPT0012550003
Tumor
0.3
CPT0024670003
Tumor
0.3
CPT0011410003
Tumor
0.3
CPT0001180009
Tumor
0.3
CPT0012080003
Tumor
0.3
CPT0011240003
Tumor
0.2
CPT0014450004
Tumor
0.2
CPT0088550004
Tumor
0.2
CPT0078660003
Tumor
0.2
CPT0026410003
Tumor
0.2
CPT0086030003
Tumor
0.2
CPT0092190003
Normal
0.2
CPT0069160003
Tumor
0.2
CPT0012370003
Tumor
0.2
CPT0015730003
Tumor
0.2
CPT0025290003
Tumor
0.2
CPT0071150004
Tumor
0.2
CPT0079410003
Tumor
0.2
CPT0086950003
Tumor
0.2
CPT0021240003
Tumor
0.2
CPT0000870016
Tumor
0.2
CPT0086820003
Tumor
0.2
CPT0077110003
Tumor
0.2
CPT0025050003
Tumor
0.2
CPT0077320001
Normal
0.2
CPT0012670003
Tumor
0.2
CPT0012280003
Tumor
0.2
CPT0077490003
Tumor
0.1
CPT0081990003
Tumor
0.1
CPT0010160003
Tumor
0.1
CPT0079480003
Tumor
0.1
CPT0023350003
Tumor
0.1
CPT0065690003
Tumor
0.1
CPT0075560003
Tumor
0.1
CPT0084560003
Tumor
0.1
CPT0006900003
Tumor
0.1
CPT0025580004
Tumor
0.1
CPT0025880003
Tumor
0.1
CPT0009080003
Normal
0.1
CPT0088760003
Tumor
0.1
CPT0088690003
Tumor
0.1
CPT0076350001
Normal
0.1
CPT0089020003
Tumor
0.1
CPT0066470004
Tumor
0.1
CPT0079300001
Normal
0.1
CPT0077310003
Tumor
0.1
CPT0025230003
Tumor
0.1
CPT0077500001
Normal
0.1
CPT0078990003
Tumor
0.1
CPT0089460004
Tumor
0.1
CPT0065750003
Tumor
0.1
CPT0012900004
Tumor
0.1
CPT0064400001
Normal
0.1
CPT0001540009
Tumor
0.1
CPT0009000003
Tumor
0.1
CPT0092290003
Tumor
0.1
CPT0007860003
Tumor
0.1
CPT0025060001
Normal
0.1
CPT0014160003
Tumor
0.1
CPT0023690003
Tumor
0.1
CPT0025350003
Tumor
0.1
CPT0012570003
Normal
0.1
CPT0088920001
Normal
0.1
CPT0063630003
Tumor
0.1
CPT0015810003
Tumor
0.1
CPT0079510001
Normal
0.1
CPT0009060003
Tumor
0.1
CPT0069000003
Tumor
0.1
CPT0006440003
Tumor
0.1
CPT0012770003
Normal
0.1
CPT0088780001
Normal
0.1
CPT0009020003
Normal
0.1
CPT0075570001
Normal
0.1
CPT0065870003
Tumor
0.1
CPT0069190001
Normal
0.1
CPT0092160003
Tumor
0.1
CPT0012920003
Normal
0.1
CPT0014470001
Normal
0.1
CPT0020120003
Tumor
0.1
CPT0082010001
Normal
0.1
CPT0079380003
Tumor
0.1
CPT0002270011
Tumor
0.1
CPT0014370004
Tumor
0.1
CPT0017450001
Normal
0.0
CPT0012640003
Normal
0.0
CPT0084590001
Normal
0.0
CPT0010110003
Tumor
0.0
CPT0000890001
Normal
0.0
CPT0078800003
Tumor
0.0
CPT0078830003
Tumor
0.0
CPT0086370003
Normal
0.0
CPT0012090003
Normal
0.0
CPT0063640001
Normal
0.0
CPT0087040003
Tumor
0.0
CPT0088900003
Tumor
0.0
CPT0078510003
Tumor
0.0
CPT0078930003
Tumor
0.0
CPT0025170003
Tumor
0.0
CPT0001350001
Normal
0.0
CPT0069010001
Normal
0.0
CPT0001270001
Normal
0.0
CPT0092310003
Normal
0.0
CPT0078940001
Normal
0.0
CPT0014130001
Normal
0.0
CPT0018250001
Normal
0.0
CPT0075720003
Tumor
0.0
CPT0066430001
Normal
0.0
CPT0081600003
Tumor
0.0
CPT0025610001
Normal
0.0
CPT0001260009
Tumor
0.0
CPT0025920001
Normal
0.0
CPT0075130003
Tumor
0.0
CPT0086970003
Normal
0.0
CPT0065930003
Tumor
0.0
CPT0002370001
Normal
0.0
CPT0010120001
Normal
0.0
CPT0002350011
Tumor
0.0
CPT0024680001
Normal
0.0
CPT0092730003
Tumor
0.0
CPT0006630003
Tumor
0.0
CPT0089040001
Normal
0.0
CPT0075170001
Normal
0.0
CPT0063330001
Normal
0.0
CPT0023710001
Normal
0.0
CPT0088480003
Tumor
0.0
CPT0023360001
Normal
0.0
CPT0013790003
Normal
0.0
CPT0015910003
Tumor
0.0
CPT0088570001
Normal
0.0
CPT0078840001
Normal
0.0
CPT0019990003
Tumor
0.0
CPT0086890003
Normal
0.0
CPT0000780007
Tumor
0.0
CPT0078670001
Normal
0.0
CPT0010170001
Normal
0.0
CPT0079230003
Tumor
0.0
CPT0087050003
Normal
0.0
CPT0007870001
Normal
0.0
CPT0065810003
Tumor
0.0
CPT0006730001
Normal
0.0
CPT0012290003
Normal
0.0
CPT0000660001
Normal
0.0
CPT0019160001
Normal
0.0
CPT0088710001
Normal
0.0
CPT0079430001
Normal
0.0
CPT0001190001
Normal
0.0
CPT0085670003
Tumor
0.0
CPT0079270003
Tumor
0.0
CPT0001550001
Normal
0.0
CPT0026420001
Normal
0.0
CPT0007470001
Normal
0.0
CPT0000790001
Normal
0.0
CPT0000640003
Tumor
0.0
CPT0006530001
Normal
0.0
CPT0020020001
Normal
0.0
CPT0077140001
Normal
0.0
CPT0001220008
Tumor
0.0
CPT0088630003
Tumor
0.0
CPT0019130003
Tumor
0.0
CPT0063320003
Tumor
0.0
CPT0006950001
Normal
0.0
CPT0066480003
Tumor
0.0
CPT0089480003
Normal
0.0
CPT0020130001
Normal
0.0
CPT0079000001
Normal
0.0
CPT0086830003
Normal
-0.1
CPT0088500001
Normal
-0.1
CPT0092740003
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0065430003
Tumor
-0.1
CPT0014350001
Normal
-0.1
CPT0086870003
Tumor
-0.1
CPT0081620001
Normal
-0.1
CPT0065450001
Normal
-0.1
CPT0092800003
Normal
-0.1
CPT0065820001
Normal
-0.1
CPT0001510001
Normal
-0.1
CPT0092790003
Tumor
-0.1
CPT0086360003
Tumor
-0.1
CPT0025110003
Tumor
-0.1
CPT0078530001
Normal
-0.1
CPT0088640003
Normal
-0.1
CPT0001230001
Normal
-0.1
CPT0076330003
Tumor
-0.1
CPT0081880003
Tumor
-0.1
CPT0064370003
Tumor
-0.1
CPT0001500009
Tumor
-0.2
CPT0007320003
Tumor
-0.2
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.