We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
RNF41
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

 
Field
All
Term
Gene name
Class
Blood group antigen proteins
Subclass
 
Category
 
Keyword
Chromosome
External id
Tissue
 
Cell type
 
Expression
Antibody panel
 
Tissue
 
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
 
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Yes
Data type
Column
Gene


                              • SPECIFICITY
                              • DISTRIBUTION
                              • EXPRESSION
                              • SPECIFICITY
                              • DISTRIBUTION
                              • EXPRESSION
                              • SPECIFICITY
                              • DISTRIBUTION
                              • EXPRESSION
                              • SPECIFICITY
                              • DISTRIBUTION
                              • EXPRESSION
                                  • SPECIFICITY
                                  • DISTRIBUTION
                                  • EXPRESSION
                                  • SPECIFICITY
                                  • DISTRIBUTION
                                  • EXPRESSION
                                  • SPECIFICITY
                                  • DISTRIBUTION
                                  • EXPRESSION
                                  • SPECIFICITY
                                  • DISTRIBUTION
                                  • EXPRESSION
                                  • SPECIFICITY
                                  • DISTRIBUTION
                                  • EXPRESSION
                                  • RELIABILITY
                                  • SUBCELLULAR VARIATION
                                  • MULTILOCALIZATION
                                  • OTHER
                                  • SPECIFICITY
                                  • DISTRIBUTION
                                  • EXPRESSION
                                  • SPECIFICITY
                                  • DISTRIBUTION
                                  • EXPRESSION
                                  • Check all
                                  • Uncheck all
                                          • SUMMARY

                                          • TISSUE

                                          • BRAIN

                                          • SINGLE CELL

                                          • SUBCELL

                                          • CANCER

                                          • BLOOD

                                          • CELL LINE

                                          • STRUCTURE

                                          • INTERACTION

                                          • RNF41
                                          TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
                                          ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
                                          DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
                                          NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
                                          SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
                                          ANTIBODIES
                                          AND
                                          VALIDATION
                                          Dictionary
                                          Tissue proteome
                                          Tissue methods
                                          SPINAL CORD - Expression summary
                                          Protein expressioni

                                          On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

                                          No data
                                          RNA expressioni

                                          A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

                                          Scroll down to view mRNA expression data in more detail.

                                          Consensus:13.4 nTPM
                                          HPA Brain:39.7 nTPM
                                          GTEx:13.4 nTPM
                                          FANTOM5:15.6 Scaled Tags Per Million
                                          Pig:36.8 nTPM
                                          BRAIN - SINGLE CELL RNA EXPRESSION
                                          Explore single cell type data
                                          Brain excitatory neuronsBrain inhibitory neuronsOther brain neuronsAstrocytesBergmann gliaOligodendrocyte progenitor cellsOligodendrocytesMicrogliaEpendymal cellsChoroid plexus epithelial cellsVascular endothelial cellsPericytesVascular smooth muscle cellsFibroblastsMonocytesMacrophagesT-cellsB-cellsNK-cells010203040nCPM

                                          SPINAL CORD - HPA Brain RNA-seq
                                          Max subtype nTPMi

                                          Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

                                          39.7
                                          Sample id Sample description nTPM
                                          Cervical spinal cord, central gray
                                          nTPM: 36.5
                                          2565 Male, age 75, midline 47.0
                                          2194 Female, age 79, both hemispheres 40.8
                                          1981 Female, age 72, midline 36.0
                                          2048 Male, age 55, midline 29.6
                                          2816 Male, age 47, midline 28.9
                                          Cervical spinal cord, dorsal horn
                                          nTPM: 39.7
                                          2069 Male, age 47, both hemispheres 47.7
                                          1877 Male, age 55, unknown 40.7
                                          2297 Male, age 75, both hemispheres 40.3
                                          2173 Female, age 72, unknown 37.7
                                          2296 Male, age 66, both hemispheres 36.2
                                          2721 Male, age 90, both hemispheres 35.4
                                          Cervical spinal cord, ventral horn
                                          nTPM: 38.4
                                          2480 Male, age 75, both hemispheres 47.4
                                          2295 Male, age 66, both hemispheres 42.6
                                          2068 Male, age 55, unknown 40.3
                                          2809 Male, age 90, both hemispheres 36.7
                                          2820 Female, age 79, both hemispheres 34.9
                                          2098 Female, age 72, unknown 28.8

                                          SPINAL CORD - GTEx RNA-seqi

                                          RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

                                          Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

                                          Max subtype nTPMi

                                          Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

                                          13.4
                                          GTEx sample id Sample description nTPM
                                          11.613.314.97.119.302468101214161820222426
                                          11.613.314.97.119.302468101214161820222426
                                          Brain - Spinal cord (cervical c-1)
                                          Average nTPM: 13.4
                                          Samples: 204

                                          Max nTPM: 27.2
                                          Min nTPM: 7.1
                                          Std nTPM: 2.8
                                          Median nTPM: 13.3
                                          GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 27.2
                                          GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 27.2
                                          GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 20.5
                                          GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 19.3
                                          GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 19.1
                                          GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 18.4
                                          GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 18.4
                                          GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 18.3
                                          GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 17.9
                                          GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 17.8
                                          GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 17.6
                                          GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 17.5
                                          GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 17.4
                                          GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 16.9
                                          GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 16.8
                                          GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 16.8
                                          GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 16.7
                                          GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 16.6
                                          GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 16.6
                                          GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 16.6
                                          GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 16.5
                                          GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 16.5
                                          GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 16.2
                                          GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 16.1
                                          GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 16.1
                                          GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 16.1
                                          GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 16.1
                                          GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 16.0
                                          GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 15.9
                                          GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 15.8
                                          GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 15.8
                                          GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 15.8
                                          GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 15.7
                                          GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 15.7
                                          GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 15.7
                                          GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 15.6
                                          GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 15.5
                                          GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 15.5
                                          GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 15.4
                                          GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 15.3
                                          GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 15.2
                                          GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 15.2
                                          GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 15.2
                                          GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 15.2
                                          GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 15.1
                                          GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 15.1
                                          GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 15.1
                                          GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 15.0
                                          GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 15.0
                                          GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 14.9
                                          GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 14.9
                                          GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 14.9
                                          GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 14.9
                                          GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 14.9
                                          GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 14.9
                                          GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 14.8
                                          GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 14.8
                                          GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 14.8
                                          GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 14.8
                                          GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 14.8
                                          GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 14.8
                                          GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 14.8
                                          GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 14.7
                                          GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 14.7
                                          GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 14.7
                                          GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 14.7
                                          GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 14.7
                                          GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 14.7
                                          GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 14.6
                                          GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 14.5
                                          GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 14.5
                                          GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 14.4
                                          GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 14.3
                                          GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 14.3
                                          GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 14.3
                                          GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 14.3
                                          GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 14.2
                                          GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 14.2
                                          GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 14.2
                                          GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 14.2
                                          GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 14.2
                                          GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 14.2
                                          GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 14.2
                                          GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 14.1
                                          GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 14.0
                                          GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 13.9
                                          GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 13.8
                                          GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 13.8
                                          GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 13.7
                                          GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 13.7
                                          GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 13.6
                                          GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 13.6
                                          GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 13.6
                                          GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 13.6
                                          GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 13.5
                                          GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 13.4
                                          GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 13.4
                                          GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 13.4
                                          GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 13.4
                                          GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 13.4
                                          GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 13.4
                                          GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 13.3
                                          GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 13.3
                                          GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 13.2
                                          GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 13.2
                                          GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 13.2
                                          GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 13.0
                                          GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 13.0
                                          GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 13.0
                                          GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 13.0
                                          GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 12.9
                                          GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 12.9
                                          GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 12.9
                                          GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 12.9
                                          GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 12.8
                                          GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 12.8
                                          GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 12.8
                                          GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 12.7
                                          GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 12.6
                                          GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 12.6
                                          GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 12.6
                                          GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 12.5
                                          GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 12.5
                                          GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 12.5
                                          GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 12.5
                                          GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 12.4
                                          GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 12.4
                                          GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 12.4
                                          GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 12.4
                                          GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 12.4
                                          GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 12.3
                                          GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 12.3
                                          GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 12.3
                                          GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 12.3
                                          GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 12.2
                                          GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 12.2
                                          GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 12.2
                                          GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 12.2
                                          GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 12.2
                                          GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 12.1
                                          GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 12.0
                                          GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 12.0
                                          GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 12.0
                                          GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 12.0
                                          GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 12.0
                                          GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 11.9
                                          GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 11.9
                                          GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 11.8
                                          GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 11.7
                                          GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 11.7
                                          GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 11.7
                                          GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 11.6
                                          GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 11.6
                                          GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 11.6
                                          GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 11.6
                                          GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 11.5
                                          GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 11.5
                                          GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 11.4
                                          GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 11.4
                                          GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 11.4
                                          GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 11.4
                                          GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 11.3
                                          GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 11.3
                                          GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 11.2
                                          GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 11.2
                                          GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 11.2
                                          GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 11.1
                                          GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 11.0
                                          GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 11.0
                                          GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 10.9
                                          GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 10.4
                                          GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 10.4
                                          GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 10.4
                                          GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 10.4
                                          GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 10.4
                                          GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 10.4
                                          GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 10.3
                                          GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 10.3
                                          GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 10.3
                                          GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 10.3
                                          GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 10.3
                                          GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 10.1
                                          GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 10.0
                                          GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 10.0
                                          GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 9.9
                                          GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 9.8
                                          GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 9.8
                                          GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 9.7
                                          GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 9.7
                                          GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 9.5
                                          GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 9.4
                                          GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 9.4
                                          GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 9.4
                                          GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 9.2
                                          GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 9.1
                                          GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 9.1
                                          GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 8.6
                                          GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 8.4
                                          GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 8.2
                                          GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 8.2
                                          GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 7.9
                                          GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 7.8
                                          GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 7.7
                                          GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 7.1
                                          Show allShow less

                                          SPINAL CORD - FANTOM5 CAGEi

                                          RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

                                          Max subtype Scaled Tags Per Millioni

                                          Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

                                          15.6
                                          FANTOM5 sample id Sample description Scaled Tags Per Million
                                          Spinal cord
                                          Scaled Tags Per Million: 15.6
                                          FF:10159-103A6 76 years, female 17.4
                                          FF:10181-103D1 60 years, female 13.8

                                          SPINAL CORD - Pig RNA-seqi

                                          RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

                                          Max subtype nTPMi

                                          Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

                                          36.8
                                          Pig sample Sample description nTPM
                                          34.536.538.733.340.80510152025303540
                                          34.536.538.733.340.80510152025303540
                                          Dorsal spinal cord
                                          nTPM: 36.8
                                          Samples: 4

                                          Max nTPM: 40.8
                                          Min nTPM: 33.3
                                          Sample A Female 40.8
                                          Sample B Female 33.3
                                          Sample C Male 38.0
                                          Sample D Male 34.9
                                          31.132.033.130.634.1051015202530
                                          31.132.033.130.634.1051015202530
                                          Ventral spinal cord
                                          nTPM: 32.2
                                          Samples: 4

                                          Max nTPM: 34.1
                                          Min nTPM: 30.6
                                          Sample A Female 32.7
                                          Sample B Female 31.3
                                          Sample C Male 34.1
                                          Sample D Male 30.6

                                          Contact

                                          • NEWS ARTICLES
                                          • PRESS ROOM

                                          The Project

                                          • INTRODUCTION
                                          • ORGANIZATION
                                          • PUBLICATIONS

                                          The Human Protein Atlas

                                          • DOWNLOADABLE DATA
                                          • LICENCE & CITATION
                                          • HELP & FAQ
                                          The Human Protein Atlas project is funded
                                          by the Knut & Alice Wallenberg Foundation.

                                          contact@proteinatlas.org