COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Low
Glandular cells: High
Peripheral nerve/ganglion: Low
RNA expressioni
Consensus:1.8 nTPM
HPA:1.8 nTPM
GTEx:1.8 nTPM
FANTOM5:10.9 Scaled Tags Per Million
COLON - SINGLE CELL RNA EXPRESSION
Neuroendocrine cellsTuft cellsColonocytesGoblet cellsT-cellsNK-cellsEnteric transient amplifying cellsEnteric stem cells0246810nCPM

COLON - Antibody stainingi
Antibody HPA041180
Endothelial cells Low
Glandular cells High
Peripheral nerve/ganglion Low


COLON - HPA RNA-seqi
Average nTPMi 1.8
overview
Male, age 54
Colon sample 67
nTPM: 1.9
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57
Colon sample 68
nTPM: 2.6
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80
Colon sample 69
nTPM: 3.2
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68
Colon sample 70
nTPM: 3.5
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68
Colon sample 76
nTPM: 1.8
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61
Colon sample 299
nTPM: 1.3
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80
Colon sample 300
nTPM: 1.7
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78
Colon sample 368
nTPM: 1.6
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84
Colon sample 381
nTPM: 0.2
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80
Colon sample 384
nTPM: 2.1
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78
Colon sample 389
nTPM: 0.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69
Colon sample 391
nTPM: 1.9
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72
Colon sample 403
nTPM: 1
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Max subtype nTPMi 1.8
GTEx sample id Sample description nTPM
1.41.82.20.43.30.00.51.01.52.02.53.03.54.04.5
Colon - Sigmoid
Average nTPM: 1.8
Samples: 419

Max nTPM: 4.6
Min nTPM: 0.4
Std nTPM: 0.6
Median nTPM: 1.8
GTEX-1I1GT-2026-SM-CKZPK 60-69 years, female 4.6
GTEX-1H1E6-1826-SM-A9G21 30-39 years, male 4.4
GTEX-ZXES-1726-SM-5E43G 30-39 years, female 4.3
GTEX-WFG7-1626-SM-4LVMF 20-29 years, male 4.1
GTEX-1RMOY-1726-SM-EVYC9 50-59 years, male 4.0
GTEX-ZVT2-1726-SM-51MRO 50-59 years, female 4.0
GTEX-111YS-1826-SM-5GIEP 60-69 years, male 3.9
GTEX-13QBU-2026-SM-5KLZB 40-49 years, female 3.8
GTEX-13VXT-2026-SM-5L3EW 20-29 years, female 3.6
GTEX-11EM3-1626-SM-5N9CO 20-29 years, female 3.5
GTEX-11ZTT-1626-SM-5EQKR 60-69 years, female 3.5
Show allShow less
1.11.51.90.43.00.00.51.01.52.02.53.03.5
Colon - Transverse
Average nTPM: 1.6
Samples: 479

Max nTPM: 3.9
Min nTPM: 0.4
Std nTPM: 0.5
Median nTPM: 1.5
GTEX-1C2JI-1626-SM-7EPHC 50-59 years, male 3.9
GTEX-17F9E-1826-SM-7IGMC 50-59 years, male 3.4
GTEX-P4PQ-1426-SM-H6Q72 60-69 years, male 3.4
GTEX-18QFQ-1526-SM-72D57 30-39 years, male 3.2
GTEX-1HCU6-2726-SM-A9SKV 60-69 years, female 3.2
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 3.2
GTEX-1IDJC-1326-SM-CL53H 50-59 years, male 3.0
GTEX-1MUQO-2626-SM-EWRO3 60-69 years, male 3.0
GTEX-ZYFC-2626-SM-5NQ6S 50-59 years, male 3.0
GTEX-18D9B-2526-SM-718BN 60-69 years, male 2.9
GTEX-OOBJ-1426-SM-E6CHH 60-69 years, male 2.9
Show allShow less

COLON - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 10.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 10.9
FF:10014-101C5 62,83,84 years, mixed 10.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

contact@proteinatlas.org