AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:3.3 nTPM
HPA Brain:27.9 nTPM
GTEx:3.3 nTPM
FANTOM5:16.0 Scaled Tags Per Million
Pig:11.2 nTPM
Mouse:66.4 nTPM
Allen mouse:5.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Brain excitatory neuronsBrain inhibitory neuronsOther brain neuronsAstrocytesBergmann gliaOligodendrocyte progenitor cellsOligodendrocytesMicrogliaEpendymal cellsChoroid plexus epithelial cellsVascular endothelial cellsPericytesVascular smooth muscle cellsFibroblastsMonocytesMacrophagesT-cellsB-cellsNK-cells0246810nCPM

AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi 27.9
Sample id Sample description nTPM
Amygdala
nTPM: 21.0
2517 Female, age 94, left hemisphere 22.4
2695 Female, age 67, right hemisphere 22.3
2814 Male, age 76, right hemisphere 21.5
2514 Male, age 75, right hemisphere 20.2
1987 Female, age 91, left hemisphere 18.6
Basal amygdala
nTPM: 25.5
2827 Female, age 67, right hemisphere 33.5
1955 Male, age 76, both hemispheres 26.3
2243 Female, age 91, right hemisphere 25.8
2685 Female, age 94, left hemisphere 24.3
2609 Male, age 75, right hemisphere 22.0
2110 Male, age 80, left hemisphere 20.9
Central amygdala
nTPM: 25.1
2826 Female, age 94, left hemisphere 30.8
2701 Female, age 91, right hemisphere 28.2
2239 Male, age 80, left hemisphere 24.8
1905 Male, age 76, both hemispheres 22.0
2515 Male, age 75, right hemisphere 19.5
Corticomedial amygdala
nTPM: 27.9
2240 Male, age 76, both hemispheres 30.7
2242 Female, age 91, right hemisphere 30.1
2429 Female, age 94, left hemisphere 29.9
2535 Female, age 67, right hemisphere 28.1
2829 Male, age 80, left hemisphere 24.5
2428 Male, age 75, right hemisphere 24.2
Lateral amygdala
nTPM: 27.0
2830 Female, age 67, right hemisphere 45.1
2255 Female, age 91, right hemisphere 24.6
2534 Female, age 94, left hemisphere 24.6
2516 Male, age 75, right hemisphere 24.2
2256 Male, age 80, left hemisphere 22.8
1883 Male, age 76, both hemispheres 20.9

AMYGDALA - GTEx RNA-seqi
Max subtype nTPMi 3.3
GTEx sample id Sample description nTPM
2.93.33.71.84.70.00.51.01.52.02.53.03.54.04.55.05.5
Brain - Amygdala
Average nTPM: 3.3
Samples: 181

Max nTPM: 5.8
Min nTPM: 1.1
Std nTPM: 0.6
Median nTPM: 3.3
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 5.8
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 5.3
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 5.1
GTEX-1RDX4-0011-R4b-SM-F3K43 50-59 years, female 5.1
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 5.0
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 5.0
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 4.7
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 4.7
GTEX-1KWVE-0011-R4a-SM-F3K5X 30-39 years, male 4.5
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 4.4
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 4.3
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AMYGDALA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 16.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 16.0
FF:10151-102I7 76 years, female 16.0

AMYGDALA - Pig RNA-seqi
Max subtype nTPMi 11.2
Pig sample Sample description nTPM
10.411.111.99.813.0012345678910111213
 		Amygdala
nTPM: 11.3
Samples: 4

Max nTPM: 13.0
Min nTPM: 9.8
Sample A Female 9.8
Sample B Female 10.6
Sample C Male 11.6
Sample D Male 13.0

AMYGDALA - Mouse RNA-seqi
Max subtype nTPMi 66.4
Mouse sample Sample description nTPM
65.265.866.964.065.90510152025303540455055606570
 		Amygdala
nTPM: 66.4
Samples: 4

Max nTPM: 70.0
Min nTPM: 64.0
Sample A Male 65.9
Sample B Male 70.0
Sample C Female 64.0
Sample D Female 65.6

AMYGDALA - Allen Mouse ISHi
Max subtype Expression energyi 5.6
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 5.6
70546185 Antisense, RP_050623_03_G01, Mouse strain C57BL/6J (56 days, male) 5.6

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