We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
386.2
nTPM
FANTOM5:
456.4
Scaled Tags Per Million
Pig:
140.2
nTPM
Allen mouse:
13.0
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
386.2
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 198.2
1984
Male, age 76, both hemispheres
245.5
2188
Female, age 91, both hemispheres
204.3
2301
Female, age 85, both hemispheres
196.8
2090
Male, age 80, both hemispheres
146.2
Dorsal cochlear nucleus nTPM: 172.6
2187
Female, age 91, both hemispheres
223.0
2370
Male, age 61, both hemispheres
205.5
2058
Male, age 76, both hemispheres
177.1
2378
Male, age 80, both hemispheres
142.9
2802
Male, age 74, right hemisphere
114.4
Dorsal tegmental nucleus nTPM: 190.5
2358
Male, age 61, both hemispheres
220.5
2083
Male, age 80, both hemispheres
219.9
1936
Male, age 76, left hemisphere
184.6
2326
Male, age 74, both hemispheres
136.9
Dorsolateral tegmental area nTPM: 155.9
2141
Male, age 76, both hemispheres
198.7
2654
Male, age 80, both hemispheres
196.7
2751
Female, age 85, both hemispheres
171.9
2360
Male, age 74, both hemispheres
106.4
2337
Male, age 61, both hemispheres
105.5
Kolliker-Fuse nucleus nTPM: 311.2
2793
Female, age 91, left hemisphere
470.0
2163
Male, age 80, both hemispheres
323.1
2315
Male, age 76, right hemisphere
140.4
Lateral lemniscal nuclei nTPM: 372.5
2320
Female, age 91, left hemisphere
424.9
2169
Male, age 76, both hemispheres
423.0
2036
Male, age 80, both hemispheres
394.7
2453
Male, age 74, right hemisphere
367.2
2746
Female, age 85, left hemisphere
252.8
Lateral parabrachial nucleus nTPM: 205.8
2139
Female, age 85, right hemisphere
285.0
2790
Male, age 61, both hemispheres
223.1
2013
Male, age 80, both hemispheres
198.5
2792
Male, age 76, both hemispheres
116.7
Lateral vestibular nucleus nTPM: 253.6
2184
Male, age 76, both hemispheres
317.4
2311
Male, age 80, both hemispheres
189.8
Locus coeruleus nTPM: 242.6
2788
Male, age 74, unknown
287.8
2014
Male, age 55, unknown
266.8
2123
Female, age 91, both hemispheres
255.1
2162
Male, age 80, both hemispheres
237.5
1980
Male, age 76, both hemispheres
237.4
2720
Male, age 74, both hemispheres
220.3
2317
Female, age 72, unknown
193.0
Medial parabrachial nucleus nTPM: 215.7
2854
Male, age 80, both hemispheres
258.6
2156
Male, age 61, both hemispheres
230.0
2170
Female, age 91, both hemispheres
209.5
2786
Male, age 76, both hemispheres
200.2
2463
Female, age 85, right hemisphere
180.3
Medial periolivary nuclei nTPM: 301.5
2171
Female, age 85, both hemispheres
429.2
2063
Male, age 76, both hemispheres
420.7
2458
Female, age 91, both hemispheres
284.2
2081
Male, age 80, both hemispheres
190.6
2791
Male, age 74, right hemisphere
183.0
Motor facial nucleus nTPM: 336.9
2062
Male, age 76, both hemispheres
415.0
2795
Female, age 91, both hemispheres
414.3
2327
Male, age 80, both hemispheres
392.6
2365
Male, age 74, right hemisphere
302.6
2697
Female, age 85, both hemispheres
287.8
2126
Male, age 61, both hemispheres
208.9
Motor trigeminal nucleus nTPM: 241.5
2079
Male, age 80, both hemispheres
349.0
2560
Male, age 74, both hemispheres
247.6
2335
Male, age 61, both hemispheres
211.1
2309
Male, age 76, both hemispheres
207.9
2321
Female, age 91, both hemispheres
191.9
Nuclei of the trapezoid body nTPM: 386.2
2159
Male, age 61, both hemispheres
439.0
2735
Female, age 85, both hemispheres
418.1
1983
Male, age 76, both hemispheres
397.6
2368
Female, age 91, both hemispheres
373.5
2166
Male, age 80, both hemispheres
303.0
Nucleus raphe magnus nTPM: 365.2
2172
Female, age 85, both hemispheres
486.6
2160
Male, age 61, both hemispheres
437.5
2455
Male, age 74, both hemispheres
371.8
2328
Male, age 80, both hemispheres
344.3
2051
Male, age 76, both hemispheres
284.4
2459
Female, age 91, both hemispheres
266.7
Paramedian reticular nucleus nTPM: 229.6
2050
Female, age 85, both hemispheres
304.7
2057
Male, age 80, both hemispheres
223.2
2313
Male, age 61, both hemispheres
215.5
2052
Male, age 76, both hemispheres
175.0
Pedunculopontine tegmental nucleus nTPM: 199.0
1921
Female, age 85, both hemispheres
223.0
2334
Male, age 80, both hemispheres
195.7
2338
Male, age 61, both hemispheres
178.2
Pontine nuclei nTPM: 327.5
2787
Female, age 85, both hemispheres
469.0
2727
Male, age 61, right hemisphere
434.5
1968
Male, age 76, left hemisphere
381.5
1863
Male, age 55, unknown
380.5
2109
Female, age 72, unknown
278.9
2319
Female, age 91, both hemispheres
257.3
2115
Male, age 80, left hemisphere
246.5
2454
Male, age 74, left hemisphere
171.6
Pontine raphe nucleus nTPM: 277.5
2122
Female, age 85, midline
345.5
2853
Male, age 76, midline
209.4
Posteroventral cochlear nucleus nTPM: 194.3
2752
Female, age 85, both hemispheres
241.6
2371
Male, age 61, both hemispheres
218.0
2070
Male, age 76, both hemispheres
214.2
2341
Male, age 80, both hemispheres
200.0
2135
Female, age 91, both hemispheres
97.5
Principal sensory trigeminal nucleus nTPM: 335.1
2158
Male, age 61, both hemispheres
464.4
2008
Male, age 80, left hemisphere
347.4
2324
Male, age 76, both hemispheres
270.9
2367
Female, age 91, left hemisphere
257.6
Reticular pontine nucleus, caudal nTPM: 306.4
2332
Male, age 80, right hemisphere
375.7
2457
Female, age 91, both hemispheres
373.8
2092
Male, age 76, both hemispheres
303.8
2559
Male, age 74, both hemispheres
172.2
Reticular pontine nucleus, oral nTPM: 285.5
2366
Female, age 91, both hemispheres
529.1
2012
Female, age 85, both hemispheres
261.3
2361
Male, age 74, both hemispheres
242.1
2167
Male, age 76, both hemispheres
203.2
1939
Male, age 80, both hemispheres
191.7
Reticulotegmental nucleus nTPM: 240.4
2325
Male, age 76, both hemispheres
296.9
2322
Female, age 91, both hemispheres
253.8
2333
Male, age 80, both hemispheres
221.3
2452
Male, age 74, both hemispheres
189.8
Spinal trigeminal nucleus, oral nTPM: 295.2
1978
Male, age 76, both hemispheres
339.8
2164
Male, age 80, both hemispheres
294.4
2737
Female, age 85, both hemispheres
251.4
Subcoeruleus area nTPM: 217.9
2089
Male, age 76, left hemisphere
317.8
1958
Male, age 80, both hemispheres
276.5
2323
Female, age 91, left hemisphere
201.4
2451
Male, age 74, both hemispheres
158.6
2369
Female, age 85, left hemisphere
135.5
Superior olive nTPM: 313.2
2561
Female, age 91, both hemispheres
372.8
1875
Female, age 85, both hemispheres
366.9
2020
Male, age 76, both hemispheres
337.5
2329
Male, age 80, right hemisphere
300.2
2364
Male, age 74, right hemisphere
188.4
Ventral periolivary nuclei nTPM: 383.1
2165
Male, age 80, both hemispheres
442.0
2794
Female, age 91, left hemisphere
415.1
2130
Female, age 85, both hemispheres
373.8
2023
Male, age 76, both hemispheres
301.5
Ventrolateral tegmental area, A5 NE cell group nTPM: 260.8
1959
Male, age 76, both hemispheres
315.9
2449
Male, age 74, both hemispheres
293.1
2161
Male, age 80, both hemispheres
285.7
2840
Female, age 85, both hemispheres
246.1
2456
Female, age 91, both hemispheres
242.1
2359
Male, age 61, both hemispheres
182.1
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
140.2
Pig sample
Sample description
nTPM
Pons nTPM: 140.2
Samples: 4
Max nTPM: 193.5
Min nTPM: 109.1
Sample A
Female
193.5
Sample B
Female
109.1
Sample C
Male
124.7
Sample D
Male
133.3
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
