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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
611.3
nTPM
HPA Brain:
571.5
nTPM
GTEx:
611.3
nTPM
FANTOM5:
638.3
Scaled Tags Per Million
Pig:
231.4
nTPM
Mouse:
1093.5
nTPM
Allen mouse:
9.4
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
571.5
Sample id
Sample description
nTPM
Amygdala nTPM: 338.5
2514
Male, age 75, right hemisphere
476.0
2517
Female, age 94, left hemisphere
443.5
2814
Male, age 76, right hemisphere
336.6
1987
Female, age 91, left hemisphere
246.6
2695
Female, age 67, right hemisphere
190.0
Basal amygdala nTPM: 526.5
2827
Female, age 67, right hemisphere
871.4
2685
Female, age 94, left hemisphere
599.3
2609
Male, age 75, right hemisphere
524.0
2110
Male, age 80, left hemisphere
451.2
2243
Female, age 91, right hemisphere
362.1
1955
Male, age 76, both hemispheres
350.7
Central amygdala nTPM: 571.5
2826
Female, age 94, left hemisphere
1372.7
2239
Male, age 80, left hemisphere
439.9
2515
Male, age 75, right hemisphere
392.9
1905
Male, age 76, both hemispheres
326.8
2701
Female, age 91, right hemisphere
325.4
Corticomedial amygdala nTPM: 464.4
2429
Female, age 94, left hemisphere
693.3
2535
Female, age 67, right hemisphere
648.9
2829
Male, age 80, left hemisphere
441.5
2240
Male, age 76, both hemispheres
381.9
2428
Male, age 75, right hemisphere
331.5
2242
Female, age 91, right hemisphere
289.3
Lateral amygdala nTPM: 515.1
2534
Female, age 94, left hemisphere
935.7
2830
Female, age 67, right hemisphere
564.1
2516
Male, age 75, right hemisphere
483.7
2256
Male, age 80, left hemisphere
459.6
2255
Female, age 91, right hemisphere
346.5
1883
Male, age 76, both hemispheres
301.2
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
611.3
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 611.3
Samples: 152
Max nTPM: 1581.9
Min nTPM: 21.0
Std nTPM: 257.8
Median nTPM: 556.4
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
1581.9
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
1420.9
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
1339.9
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
1290.9
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
1256.9
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
1221.8
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
1172.5
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
1144.7
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
1135.3
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
1063.9
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
1051.6
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
1015.5
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
986.7
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
974.1
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
974.1
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
960.1
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
937.9
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
925.7
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
924.0
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
901.9
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
885.6
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
864.8
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
852.8
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
834.1
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
829.0
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
826.9
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
823.8
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
819.4
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
813.2
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
810.5
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
807.6
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
797.9
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
796.2
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
784.1
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
777.6
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
765.1
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
765.0
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
762.7
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
728.9
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
727.6
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
710.1
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
706.1
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
706.0
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
700.0
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
692.7
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
682.6
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
679.5
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
676.7
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
676.4
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
676.0
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
671.0
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
658.1
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
651.5
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
647.0
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
645.7
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
643.2
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
637.3
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
633.6
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
629.3
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
628.1
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
625.0
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
624.9
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
619.3
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
612.5
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
603.5
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
591.9
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
586.2
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
582.8
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
575.8
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
573.7
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
570.8
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
568.0
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
561.6
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
561.0
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
560.5
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
557.7
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
555.1
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
551.4
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
550.5
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
547.5
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
544.7
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
540.1
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
532.1
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
527.7
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
526.7
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
520.7
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
520.0
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
519.6
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
519.4
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
509.2
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
505.5
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
501.0
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
500.8
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
500.1
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
499.7
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
498.5
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
476.3
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
476.3
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
474.8
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
471.8
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
462.6
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
461.3
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
457.9
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
457.2
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
452.8
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
451.6
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
449.9
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
449.5
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
447.2
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
447.1
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
444.3
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
443.5
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
442.4
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
442.0
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
441.1
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
440.0
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
437.0
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
428.7
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
426.3
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
420.2
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
415.4
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
409.0
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
401.8
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
397.0
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
395.9
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
395.9
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
391.9
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
391.1
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
384.4
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
375.1
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
373.2
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
368.8
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
362.9
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
359.7
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
356.3
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
353.4
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
348.1
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
338.6
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
333.3
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
331.9
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
331.2
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
325.1
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
306.9
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
296.8
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
291.2
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
270.8
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
263.0
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
257.9
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
254.2
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
232.5
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
230.3
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
21.0
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1093.5
Mouse sample
Sample description
nTPM
Amygdala nTPM: 1093.5
Samples: 4
Max nTPM: 1444.5
Min nTPM: 864.7
Sample A
Male
864.7
Sample B
Male
1065.9
Sample C
Female
1444.5
Sample D
Female
998.9
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.