HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:348.1 nTPM
HPA Brain:650.9 nTPM
GTEx:348.1 nTPM
FANTOM5:481.5 Scaled Tags Per Million
Pig:396.0 nTPM
Mouse:933.4 nTPM
Allen mouse:9.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA004469
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 650.9
Sample id Sample description nTPM
Hippocampus
nTPM: 332.5
2148 Female, age 91, left hemisphere 424.9
2621 Female, age 67, right hemisphere 389.3
1898 Male, age 80, left hemisphere 353.1
2529 Female, age 94, left hemisphere 320.4
1911 Female, age 85, right hemisphere 259.4
1855 Male, age 76, left hemisphere 247.8
Dentate gyrus
nTPM: 418.1
2530 Female, age 94, left hemisphere 669.2
2531 Female, age 67, both hemispheres 427.0
1927 Female, age 91, both hemispheres 409.7
2528 Male, age 74, both hemispheres 398.9
2246 Female, age 85, both hemispheres 370.4
2010 Male, age 76, both hemispheres 233.7
Entorhinal gyrus
nTPM: 636.6
2686 Male, age 75, right hemisphere 1020.6
2764 Male, age 80, right hemisphere 711.8
2613 Female, age 94, left hemisphere 640.9
1938 Female, age 85, left hemisphere 622.8
1787 Male, age 76, left hemisphere 473.1
2117 Female, age 91, right hemisphere 350.2
Hippocampus, CA1
nTPM: 293.0
2749 Male, age 80, left hemisphere 420.2
1873 Female, age 85, both hemispheres 311.8
2082 Female, age 91, right hemisphere 279.0
2527 Male, age 74, both hemispheres 239.0
2045 Male, age 76, both hemispheres 214.9
Hippocampus, CA2
nTPM: 354.5
1892 Male, age 76, both hemispheres 485.7
2437 Female, age 94, left hemisphere 446.1
1940 Female, age 85, left hemisphere 396.3
2249 Male, age 74, both hemispheres 280.0
1963 Male, age 80, left hemisphere 267.1
2113 Female, age 91, right hemisphere 252.0
Hippocampus, CA3
nTPM: 416.7
2861 Female, age 67, both hemispheres 1124.9
2620 Female, age 94, left hemisphere 324.6
1891 Female, age 85, both hemispheres 297.7
1867 Male, age 76, both hemispheres 290.1
2137 Male, age 80, left hemisphere 254.9
2436 Male, age 74, both hemispheres 208.3
Parahippocampal cortex
nTPM: 650.9
2622 Female, age 67, right hemisphere 1093.3
2532 Female, age 72, left hemisphere 763.5
2245 Female, age 91, both hemispheres 707.1
2692 Male, age 74, both hemispheres 693.0
1850 Male, age 80, both hemispheres 665.3
2693 Female, age 94, both hemispheres 590.6
1933 Female, age 85, both hemispheres 565.1
1990 Female, age 91, right hemisphere 505.4
2250 Female, age 67, right hemisphere 490.7
2018 Male, age 76, both hemispheres 435.3
Perirhinal gyrus
nTPM: 618.7
1841 Female, age 85, right hemisphere 827.4
1794 Male, age 80, right hemisphere 708.7
2848 Male, age 76, right hemisphere 683.7
1847 Female, age 91, left hemisphere 510.7
2521 Female, age 94, right hemisphere 363.1
Subiculum
nTPM: 420.6
2619 Male, age 74, both hemispheres 551.2
1977 Female, age 85, both hemispheres 505.0
2438 Female, age 94, left hemisphere 465.8
1901 Male, age 80, both hemispheres 388.3
2729 Female, age 91, right hemisphere 307.7
2042 Male, age 76, both hemispheres 305.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 348.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 348.1
Samples: 197

Max nTPM: 1541.8
Min nTPM: 47.6
Std nTPM: 238.2
Median nTPM: 275.8
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 1541.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 1324.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1211.5
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 1198.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 1181.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1028.9
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 949.6
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 944.7
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 935.3
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 921.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 911.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 481.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 481.5
FF:10153-102I9 76 years, female 524.7
FF:10169-103B7 60 years, female 438.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 396.0
Pig sample Sample description nTPM
Subiculum
nTPM: 322.8
Samples: 4

Max nTPM: 490.5
Min nTPM: 223.2
Sample A Female 490.5
Sample B Female 306.2
Sample C Male 271.2
Sample D Male 223.2
Dorsal hippocampus
nTPM: 181.5
Samples: 4

Max nTPM: 253.6
Min nTPM: 113.0
Sample A Female 205.2
Sample B Female 154.0
Sample C Male 253.6
Sample D Male 113.0
Entorhinal cortex
nTPM: 396.0
Samples: 4

Max nTPM: 425.4
Min nTPM: 384.0
Sample A Female 384.1
Sample B Female 390.6
Sample C Male 384.0
Sample D Male 425.4
Ventral hippocampus
nTPM: 168.4
Samples: 4

Max nTPM: 205.9
Min nTPM: 145.1
Sample A Female 151.6
Sample B Female 145.1
Sample C Male 205.9
Sample D Male 170.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 933.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 933.5
Samples: 4

Max nTPM: 1072.0
Min nTPM: 748.2
Sample A Male 1072.0
Sample B Male 991.7
Sample C Female 921.9
Sample D Female 748.2
Hippocampal formation
nTPM: 681.2
Samples: 4

Max nTPM: 800.1
Min nTPM: 563.5
Sample A Male 800.1
Sample B Male 633.5
Sample C Female 563.5
Sample D Female 727.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 9.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.2
79556603 Antisense, RP_071018_02_A11, Mouse strain C57BL/6J (56 days, male) 9.2
79360322 Antisense, RP_071018_02_A11, Mouse strain C57BL/6J (56 days, male) 8.1

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