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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SH3BGRL3 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
158.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
1644.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
448.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
293.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
260.1
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
245.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
243.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
238.2
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
230.3
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
226.8
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
219.8
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
216.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
198.6
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
193.4
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
185.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
183.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
170.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
153.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
151.1
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
149.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
147.8
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
146.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
145.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
144.5
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
143.8
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
140.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
140.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
139.6
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
138.2
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
127.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
118.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
115.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
111.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
109.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
108.6
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
106.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
103.7
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
102.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
101.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
99.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
98.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
97.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
95.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
93.7
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
92.8
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
92.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
92.1
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
92.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
91.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
87.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
84.2
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
81.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
78.5
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
78.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
77.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
73.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
72.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
70.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
68.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
68.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
68.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
66.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
66.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
60.7
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SH3BGRL3 is potential prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
325.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
2552.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
1510.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
1435.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
1362.9
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
1125.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
1102.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
964.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
910.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
894.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
842.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
819.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
817.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
805.3
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
801.8
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
783.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
770.4
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
735.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
723.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
722.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
696.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
681.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
663.2
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
660.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
653.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
652.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
639.3
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
629.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
626.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
594.8
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
586.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
574.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
570.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
568.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
563.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
558.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
558.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
549.8
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
548.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
546.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
545.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
540.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
535.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
534.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
533.0
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
525.5
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
524.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
523.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
516.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
515.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
514.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
509.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
509.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
507.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
505.2
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
504.1
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
502.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
502.9
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
500.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
500.1
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
495.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
494.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
492.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
491.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
488.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
486.8
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
481.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
470.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
469.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
469.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
467.5
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
466.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
461.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
460.1
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
459.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
455.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
449.9
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
447.6
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
446.4
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
446.3
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
445.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
444.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
442.8
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
438.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
438.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
436.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
436.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
431.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
430.3
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
430.1
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
429.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
424.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
423.3
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
423.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
422.8
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
422.2
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
418.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
417.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
416.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
414.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
414.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
410.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
409.6
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
407.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
406.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
406.9
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
405.6
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
405.1
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
403.3
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
402.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
401.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
400.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
397.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
397.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
397.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
396.5
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
394.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
394.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
394.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
393.9
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
393.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
393.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
389.7
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
389.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
389.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
389.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
388.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
386.3
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
381.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
381.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
379.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
379.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
378.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
376.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
374.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
374.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
374.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
373.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
371.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
371.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
370.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
369.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
369.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
368.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
366.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
365.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
364.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
364.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
361.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
359.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
357.0
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
354.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
352.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
351.8
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
351.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
351.0
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
350.6
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
350.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
349.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
348.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
348.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
346.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
344.8
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
344.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
342.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
340.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
338.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
337.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
337.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
336.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
335.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
335.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
334.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
333.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
333.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
333.3
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
332.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
331.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
330.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
330.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
329.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
328.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
327.9
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
327.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
327.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
323.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
323.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
323.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
322.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
322.2
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
322.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
320.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
320.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
320.4
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
319.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
319.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
319.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
318.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
317.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
317.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
316.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
316.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
315.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
315.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
315.7
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
314.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
314.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
313.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
313.4
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
312.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
311.8
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
310.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
310.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
308.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
307.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
307.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
306.9
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
306.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
306.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
306.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
306.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
305.0
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
304.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
303.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
302.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
302.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
302.6
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
302.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
299.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
299.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
297.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
297.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
296.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
296.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
296.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
296.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
295.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
295.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
294.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
294.4
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
293.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
293.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
293.0
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
292.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
292.5
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
292.3
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
292.2
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
291.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
291.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
291.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
291.3
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
290.7
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
290.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
289.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
289.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
288.8
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
287.5
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
286.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
286.3
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
286.1
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
285.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
285.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
285.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
284.9
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
284.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
283.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
283.3
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
282.7
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
280.4
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
280.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
279.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
279.6
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
279.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
279.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
279.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
279.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
278.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
278.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
277.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
276.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
276.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
276.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
276.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
276.1
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
276.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
274.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
273.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
272.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
272.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
270.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
270.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
269.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
268.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
267.6
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
266.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
266.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
265.9
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
265.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
265.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
263.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
263.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
263.0
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
262.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
262.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
262.7
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
261.8
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
261.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
260.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
260.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
260.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
260.0
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
259.6
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
258.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
258.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
257.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
257.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
257.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
256.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
256.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
256.3
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
256.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
256.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
255.7
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
254.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
253.2
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
252.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
251.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
251.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
251.1
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
250.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
250.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
250.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
249.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
248.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
248.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
248.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
248.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
247.6
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
247.4
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
247.3
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
247.3
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
244.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
244.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
244.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
244.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
243.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
243.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
243.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
243.3
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
243.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
242.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
241.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
241.0
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
241.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
240.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
240.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
240.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
240.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
240.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
239.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
238.8
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
237.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
236.3
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
233.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
233.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
233.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
232.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
232.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
230.4
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
229.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
228.3
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
227.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
227.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
227.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
227.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
226.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
226.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
226.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
226.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
225.8
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
225.8
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
225.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
225.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
225.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
224.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
222.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
221.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
221.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
221.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
220.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
220.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
220.5
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
220.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
220.1
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
219.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
218.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
218.1
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
216.5
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
215.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
215.5
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
215.3
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
215.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
215.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
215.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
214.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
213.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
213.4
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
211.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
210.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
210.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
210.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
209.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
209.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
209.1
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
208.4
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
207.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
207.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
206.5
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
206.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
206.4
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
206.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
205.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
205.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
204.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
204.2
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
203.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
203.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
202.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
201.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
200.4
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
200.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
199.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
199.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
198.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
198.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
197.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
197.2
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
197.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
196.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
196.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
194.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
194.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
194.3
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
194.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
191.4
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
190.4
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
189.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
189.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
187.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
186.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
185.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
184.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
184.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
184.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
184.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
183.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
183.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
182.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
181.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
180.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
179.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
179.2
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
178.9
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
177.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
176.3
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
175.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
175.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
175.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
175.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
174.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
172.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
170.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
170.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
170.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
169.7
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
169.6
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
166.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
165.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
164.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
163.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
161.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
160.4
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
160.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
158.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
157.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
157.2
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
157.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
156.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
155.7
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
153.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
152.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
147.6
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
147.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
146.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
143.2
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
142.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
139.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
132.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
129.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
124.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
123.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
121.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
115.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
112.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
110.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
102.8
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
94.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
94.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
85.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
77.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
77.5
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
77.2
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
76.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
73.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
72.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
70.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
58.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
58.1
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
56.8
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
47.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
47.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SH3BGRL3 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
230.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
740.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
599.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
561.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
560.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
495.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
491.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
473.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
384.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
365.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
351.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
337.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
324.3
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
308.2
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
307.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
304.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
301.4
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
299.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
297.9
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
295.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
292.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
288.1
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
283.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
279.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
277.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
272.4
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
267.0
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
266.7
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
263.3
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
261.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
260.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
259.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
259.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
250.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
247.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
245.1
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
239.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
237.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
234.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
229.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
229.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
226.5
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
221.8
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
221.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
220.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
217.9
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
217.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
212.0
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
212.0
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
210.5
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
210.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
203.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
196.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
195.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
194.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
193.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
191.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
190.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
188.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
187.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
184.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
181.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
179.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
175.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
172.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
172.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
171.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
166.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
161.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
161.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
160.3
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
157.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
155.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
155.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
154.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
154.6
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
153.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
153.0
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
151.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
147.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
147.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
145.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
144.4
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
142.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
142.4
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
138.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
138.2
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
135.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
134.4
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
133.9
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
133.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
131.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
127.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
126.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
125.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
123.8
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
121.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
117.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
114.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
75.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SH3BGRL3 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
378.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
1826.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
1425.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
1243.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
1210.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
1048.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
1010.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
1003.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
963.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
848.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
797.6
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
791.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
783.9
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
779.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
774.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
773.9
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
743.2
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
695.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
684.5
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
677.7
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
668.5
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
667.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
667.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
659.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
658.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
654.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
633.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
629.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
621.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
617.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
600.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
597.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
593.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
587.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
586.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
577.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
576.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
563.3
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
560.4
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
557.3
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
556.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
554.8
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
545.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
540.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
534.8
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
527.5
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
522.6
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
521.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
516.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
514.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
513.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
497.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
497.0
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
495.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
494.1
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
491.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
485.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
479.4
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
475.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
474.0
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
473.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
472.6
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
467.5
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
464.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
464.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
463.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
456.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
455.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
454.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
451.2
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
449.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
447.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
439.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
439.4
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
438.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
437.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
433.3
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
432.7
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
428.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
427.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
425.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
423.7
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
423.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
422.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
419.8
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
419.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
416.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
413.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
411.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
411.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
403.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
403.0
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
399.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
396.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
395.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
395.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
395.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
388.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
385.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
383.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
382.3
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
381.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
380.3
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
378.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
376.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
375.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
373.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
372.9
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
367.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
367.5
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
364.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
364.2
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
363.8
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
363.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
363.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
360.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
358.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
357.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
353.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
352.9
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
352.6
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
347.9
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
347.8
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
347.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
346.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
345.3
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
344.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
343.5
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
342.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
341.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
341.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
340.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
339.1
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
339.1
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
339.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
338.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
338.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
337.8
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
336.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
335.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
335.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
335.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
333.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
331.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
330.3
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
329.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
329.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
328.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
325.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
324.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
324.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
323.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
323.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
322.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
321.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
321.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
318.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
317.2
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
315.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
313.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
312.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
309.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
308.4
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
305.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
302.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
301.5
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
301.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
301.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
301.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
299.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
299.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
298.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
298.4
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
297.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
293.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
291.4
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
291.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
290.3
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
289.9
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
288.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
288.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
287.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
286.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
286.0
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
284.1
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
282.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
282.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
282.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
280.9
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
279.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
279.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
278.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
276.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
276.2
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
274.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
272.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
270.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
269.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
268.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
268.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
264.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
263.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
263.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
262.7
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
261.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
261.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
260.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
260.2
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
254.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
254.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
253.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
248.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
247.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
247.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
246.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
242.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
242.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
239.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
239.1
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
237.2
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
237.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
236.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
236.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
236.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
233.3
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
230.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
230.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
229.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
228.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
224.6
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
224.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
223.9
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
220.7
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
220.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
220.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
217.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
216.0
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
215.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
214.4
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
214.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
213.8
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
213.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
212.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
212.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
212.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
210.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
210.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
207.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
205.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
204.9
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
203.7
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
202.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
200.8
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
199.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
196.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
189.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
188.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
186.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
186.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
181.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
178.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
177.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
176.9
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
176.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
174.1
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
171.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
169.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
166.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
158.1
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
151.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
149.7
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
147.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
146.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
141.6
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
139.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
135.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
125.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
120.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
103.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
93.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
91.5
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
88.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
85.2
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088550004
Tumor
1.5
CPT0076330003
Tumor
1.2
CPT0079380003
Tumor
1.0
CPT0017850003
Tumor
0.9
CPT0063630003
Tumor
0.8
CPT0025290003
Tumor
0.8
CPT0001180009
Tumor
0.7
CPT0001260009
Tumor
0.7
CPT0084560003
Tumor
0.7
CPT0086030003
Tumor
0.7
CPT0065690003
Tumor
0.7
CPT0078990003
Tumor
0.7
CPT0065750003
Tumor
0.7
CPT0023350003
Tumor
0.7
CPT0075560003
Tumor
0.7
CPT0007860003
Tumor
0.7
CPT0012180003
Tumor
0.6
CPT0066480003
Tumor
0.6
CPT0092160003
Tumor
0.6
CPT0081880003
Tumor
0.6
CPT0025050003
Tumor
0.6
CPT0023690003
Tumor
0.6
CPT0092190003
Normal
0.6
CPT0012550003
Tumor
0.5
CPT0010110003
Tumor
0.5
CPT0086950003
Tumor
0.5
CPT0092730003
Tumor
0.5
CPT0065430003
Tumor
0.5
CPT0012280003
Tumor
0.5
CPT0001540009
Tumor
0.5
CPT0088480003
Tumor
0.4
CPT0086360003
Tumor
0.4
CPT0092790003
Tumor
0.4
CPT0025880003
Tumor
0.4
CPT0064370003
Tumor
0.4
CPT0015810003
Tumor
0.4
CPT0021240003
Tumor
0.4
CPT0087040003
Tumor
0.4
CPT0086870003
Tumor
0.4
CPT0086820003
Tumor
0.4
CPT0075720003
Tumor
0.4
CPT0025230003
Tumor
0.4
CPT0081600003
Tumor
0.3
CPT0065930003
Tumor
0.3
CPT0019990003
Tumor
0.3
CPT0001500009
Tumor
0.3
CPT0089020003
Tumor
0.3
CPT0000640003
Tumor
0.3
CPT0065870003
Tumor
0.3
CPT0077320001
Normal
0.3
CPT0015910003
Tumor
0.3
CPT0069160003
Tumor
0.3
CPT0088630003
Tumor
0.3
CPT0014450004
Tumor
0.3
CPT0092290003
Tumor
0.3
CPT0077310003
Tumor
0.3
CPT0063320003
Tumor
0.3
CPT0017410003
Tumor
0.3
CPT0006440003
Tumor
0.3
CPT0078930003
Tumor
0.3
CPT0075130003
Tumor
0.3
CPT0079410003
Tumor
0.3
CPT0012670003
Tumor
0.3
CPT0026410003
Tumor
0.3
CPT0014370004
Tumor
0.2
CPT0001340003
Tumor
0.2
CPT0089460004
Tumor
0.2
CPT0079480003
Tumor
0.2
CPT0020120003
Tumor
0.2
CPT0088690003
Tumor
0.2
CPT0025170003
Tumor
0.2
CPT0025350003
Tumor
0.2
CPT0014160003
Tumor
0.2
CPT0002350011
Tumor
0.2
CPT0006900003
Tumor
0.2
CPT0065810003
Tumor
0.2
CPT0078510003
Tumor
0.2
CPT0000780007
Tumor
0.2
CPT0000870016
Tumor
0.2
CPT0011240003
Tumor
0.2
CPT0015730003
Tumor
0.2
CPT0012080003
Tumor
0.2
CPT0084590001
Normal
0.2
CPT0075170001
Normal
0.1
CPT0006630003
Tumor
0.1
CPT0085670003
Tumor
0.1
CPT0014470001
Normal
0.1
CPT0071150004
Tumor
0.1
CPT0001220008
Tumor
0.1
CPT0077490003
Tumor
0.1
CPT0079510001
Normal
0.1
CPT0088900003
Tumor
0.1
CPT0077110003
Tumor
0.1
CPT0025110003
Tumor
0.1
CPT0066470004
Tumor
0.0
CPT0088760003
Tumor
0.0
CPT0088570001
Normal
0.0
CPT0024670003
Tumor
0.0
CPT0010120001
Normal
0.0
CPT0025580004
Tumor
0.0
CPT0079270003
Tumor
0.0
CPT0001270001
Normal
0.0
CPT0078800003
Tumor
0.0
CPT0007320003
Tumor
0.0
CPT0081990003
Tumor
0.0
CPT0065820001
Normal
-0.1
CPT0075570001
Normal
-0.1
CPT0010160003
Tumor
-0.1
CPT0019130003
Tumor
-0.1
CPT0069190001
Normal
-0.1
CPT0079230003
Tumor
-0.1
CPT0002270011
Tumor
-0.1
CPT0066520001
Normal
-0.1
CPT0001190001
Normal
-0.1
CPT0076350001
Normal
-0.1
CPT0012290003
Normal
-0.1
CPT0006530001
Normal
-0.2
CPT0000660001
Normal
-0.3
CPT0018250001
Normal
-0.3
CPT0086830003
Normal
-0.3
CPT0078830003
Tumor
-0.3
CPT0007870001
Normal
-0.3
CPT0088710001
Normal
-0.3
CPT0092800003
Normal
-0.3
CPT0020130001
Normal
-0.3
CPT0077140001
Normal
-0.3
CPT0024680001
Normal
-0.3
CPT0009000003
Tumor
-0.3
CPT0001550001
Normal
-0.3
CPT0079300001
Normal
-0.4
CPT0001510001
Normal
-0.4
CPT0063640001
Normal
-0.4
CPT0025060001
Normal
-0.4
CPT0069000003
Tumor
-0.4
CPT0000890001
Normal
-0.4
CPT0079430001
Normal
-0.4
CPT0063330001
Normal
-0.4
CPT0078940001
Normal
-0.4
CPT0012090003
Normal
-0.4
CPT0012640003
Normal
-0.4
CPT0019160001
Normal
-0.4
CPT0086970003
Normal
-0.4
CPT0014130001
Normal
-0.4
CPT0066430001
Normal
-0.4
CPT0025920001
Normal
-0.4
CPT0088920001
Normal
-0.4
CPT0089040001
Normal
-0.4
CPT0012370003
Tumor
-0.4
CPT0078660003
Tumor
-0.4
CPT0077500001
Normal
-0.5
CPT0081620001
Normal
-0.5
CPT0000790001
Normal
-0.5
CPT0001230001
Normal
-0.5
CPT0023360001
Normal
-0.5
CPT0012900004
Tumor
-0.5
CPT0006730001
Normal
-0.5
CPT0025610001
Normal
-0.5
CPT0014350001
Normal
-0.5
CPT0087050003
Normal
-0.5
CPT0079180003
Tumor
-0.5
CPT0011410003
Tumor
-0.5
CPT0078530001
Normal
-0.5
CPT0020020001
Normal
-0.5
CPT0092740003
Normal
-0.5
CPT0088640003
Normal
-0.5
CPT0064400001
Normal
-0.5
CPT0086370003
Normal
-0.5
CPT0092310003
Normal
-0.5
CPT0007470001
Normal
-0.5
CPT0010170001
Normal
-0.5
CPT0065450001
Normal
-0.5
CPT0086890003
Normal
-0.5
CPT0013790003
Normal
-0.6
CPT0078840001
Normal
-0.6
CPT0023710001
Normal
-0.6
CPT0006950001
Normal
-0.6
CPT0089480003
Normal
-0.6
CPT0026420001
Normal
-0.6
CPT0079000001
Normal
-0.6
CPT0012570003
Normal
-0.6
CPT0088500001
Normal
-0.6
CPT0001350001
Normal
-0.6
CPT0009020003
Normal
-0.7
CPT0088970003
Tumor
-0.7
CPT0088780001
Normal
-0.7
CPT0002370001
Normal
-0.7
CPT0078670001
Normal
-0.7
CPT0012920003
Normal
-0.8
CPT0082010001
Normal
-0.8
CPT0009060003
Tumor
-0.8
CPT0069010001
Normal
-0.8
CPT0009080003
Normal
-0.9
CPT0012770003
Normal
-1.0
CPT0017450001
Normal
-1.0
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
