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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SH3BGRL3 is not prognostic in Cervical Squamous Cell Carcinoma and Endocervical Adenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
662.2
Number of samples
283
Samples
Sample
Description
TPM
TCGA-DR-A0ZM-01A
0 years, female, white, stage:Stage IIIB, alive, 1791 days
2804.7
TCGA-EK-A2RN-01A
0 years, female, white, stage:Stage IB, alive, 71 days
2594.6
TCGA-EK-A2IP-01A
0 years, female, white, stage:Stage IB, alive, 202 days
2329.4
TCGA-EK-A2RA-01A
0 years, female, stage:Stage IIA, alive, 1246 days
2014.0
TCGA-FU-A3TQ-01A
0 years, female, white, stage:Stage IIIB, alive, 795 days
1870.5
TCGA-EA-A3HU-01A
0 years, female, white, stage:Stage II, alive, 1013 days
1850.4
TCGA-C5-A7X5-01A
0 years, female, black or african american, stage:Stage IVB, dead, 414 days
1842.8
TCGA-IR-A3LC-01A
0 years, female, white, stage:Stage IB, alive, 3935 days
1533.6
TCGA-IR-A3LL-01A
0 years, female, white, stage:Stage IB, alive, 1106 days
1458.4
TCGA-EK-A2PL-01A
0 years, female, white, stage:Stage IIIB, alive, 13 days
1410.8
TCGA-VS-A8Q8-01A
0 years, female, white, stage:Stage IB, dead, 978 days
1357.5
TCGA-VS-A9UI-01A
0 years, female, white, stage:Stage IIB, dead, 1372 days
1333.2
TCGA-EK-A2RO-01A
0 years, female, american indian or alaska native, stage:Stage IIB, alive, 2 days
1302.5
TCGA-JX-A3PZ-01A
0 years, female, white, stage:Stage IB, dead, 642 days
1302.4
TCGA-VS-A94Y-01A
0 years, female, white, stage:Stage IIB, dead, 144 days
1282.5
TCGA-JX-A5QV-01A
0 years, female, white, stage:Stage IB, alive, 636 days
1244.3
TCGA-EA-A5O9-01A
0 years, female, white, stage:Stage IB, alive, 788 days
1241.9
TCGA-C5-A1BM-01A
0 years, female, black or african american, stage:Stage IB, dead, 2520 days
1219.7
TCGA-IR-A3LH-01A
0 years, female, black or african american, stage:Stage IIA, alive, 2394 days
1194.8
TCGA-EA-A44S-01A
0 years, female, white, stage:Stage IIIB, alive, 369 days
1194.7
TCGA-EA-A3HQ-01A
0 years, female, white, stage:Stage II, alive, 1136 days
1172.3
TCGA-C5-A1M7-01A
0 years, female, white, stage:Stage IB, alive, 1409 days
1139.6
TCGA-C5-A7UE-01A
0 years, female, white, stage:Stage IB, alive, 4738 days
1135.1
TCGA-C5-A1ML-01A
0 years, female, white, stage:Stage IB, dead, 636 days
1124.3
TCGA-C5-A1MH-01A
0 years, female, white, stage:Stage IIIB, dead, 1186 days
1107.9
TCGA-MA-AA3Y-01A
0 years, female, white, stage:Stage IB, alive, 542 days
1096.0
TCGA-EA-A3HT-01A
0 years, female, white, stage:Stage IB, alive, 954 days
1092.8
TCGA-DS-A0VK-01A
0 years, female, white, stage:Stage IB, dead, 1118 days
1080.8
TCGA-VS-A9UD-01A
0 years, female, white, stage:Stage IIIA, alive, 739 days
1077.9
TCGA-DS-A0VN-01A
0 years, female, white, stage:Stage IB, alive, 3609 days
1071.1
TCGA-C5-A8YR-01A
0 years, female, white, stage:Stage IB, dead, 837 days
1050.3
TCGA-C5-A7CH-01A
0 years, female, white, stage:Stage IIB, alive, 4694 days
1041.2
TCGA-JW-AAVH-01A
0 years, female, white, stage:Stage IB, alive, 552 days
1029.1
TCGA-ZJ-AAXA-01A
0 years, female, white, stage:Stage IB, alive, 43 days
1024.4
TCGA-EK-A2PI-01A
0 years, female, white, stage:Stage IIIB, alive, 586 days
1015.4
TCGA-C5-A7CJ-01A
0 years, female, white, stage:Stage IIA, dead, 3097 days
1006.8
TCGA-ZJ-AAX4-01A
0 years, female, white, stage:Stage II, alive, 21 days
993.4
TCGA-DS-A0VM-01A
0 years, female, white, stage:Stage IB, alive, 3589 days
983.2
TCGA-JW-A5VI-01A
0 years, female, american indian or alaska native, stage:Stage IIB, alive, 747 days
980.4
TCGA-DS-A1O9-01A
0 years, female, white, stage:Stage IVA, dead, 266 days
973.0
TCGA-EA-A3QD-01A
0 years, female, white, stage:Stage IIIB, alive, 397 days
965.0
TCGA-MU-A8JM-01A
0 years, female, white, stage:Stage IB, alive, 607 days
956.0
TCGA-C5-A0TN-01A
0 years, female, black or african american, stage:Stage IB, dead, 348 days
945.7
TCGA-UC-A7PD-01A
0 years, female, american indian or alaska native, stage:Stage IB, dead, 355 days
932.8
TCGA-Q1-A6DT-01A
0 years, female, white, stage:Stage I, dead, 275 days
932.1
TCGA-EA-A1QS-01A
0 years, female, white, stage:Stage IB, alive, 1203 days
931.3
TCGA-R2-A69V-01A
0 years, female, white, stage:Stage IB, alive, 596 days
930.8
TCGA-C5-A1BJ-01A
0 years, female, white, stage:Stage IIB, alive, 4385 days
927.2
TCGA-EX-A1H5-01A
0 years, female, black or african american, stage:Stage IIB, alive, 619 days
920.2
TCGA-VS-A8EL-01A
0 years, female, black or african american, stage:Stage IIB, alive, 1992 days
919.2
TCGA-DG-A2KL-01A
0 years, female, stage:Stage IIA, alive, 1367 days
914.6
TCGA-C5-A1MK-01A
0 years, female, white, stage:Stage IIIB, dead, 74 days
912.9
TCGA-VS-A8QC-01A
0 years, female, white, stage:Stage IVA, dead, 350 days
910.9
TCGA-BI-A0VS-01A
0 years, female, white, stage:Stage IB, alive, 1735 days
909.1
TCGA-EA-A78R-01A
0 years, female, asian, stage:Stage IB, alive, 410 days
906.5
TCGA-C5-A2LZ-01A
0 years, female, white, stage:Stage IIIB, dead, 3046 days
905.9
TCGA-JW-A852-01A
0 years, female, white, stage:Stage IIB, dead, 252 days
897.2
TCGA-MA-AA3X-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 617 days
895.4
TCGA-VS-A9UH-01A
0 years, female, black or african american, stage:Stage IVA, alive, 1427 days
879.2
TCGA-C5-A3HE-01A
0 years, female, white, stage:Stage IB, alive, 548 days
876.5
TCGA-C5-A2LX-01A
0 years, female, white, stage:Stage IB, alive, 2526 days
867.5
TCGA-FU-A3WB-01A
0 years, female, white, stage:Stage IIA, alive, 491 days
867.3
TCGA-C5-A2LY-01A
0 years, female, white, stage:Stage IB, alive, 2383 days
865.9
TCGA-C5-A7X8-01A
0 years, female, white, stage:Stage IB, alive, 83 days
846.9
TCGA-VS-A9UU-01A
0 years, female, stage:Stage IIB, alive, 442 days
841.4
TCGA-C5-A1M5-01A
0 years, female, white, stage:Stage IB, dead, 2052 days
839.4
TCGA-MA-AA43-01A
0 years, female, white, stage:Stage IIIB, alive, 346 days
838.4
TCGA-DS-A7WI-01A
0 years, female, white, stage:Stage IIA, dead, 252 days
837.8
TCGA-VS-A8EG-01A
0 years, female, stage:Stage IB, alive, 1386 days
834.5
TCGA-UC-A7PF-01A
0 years, female, stage:Stage IB, dead, 2859 days
820.2
TCGA-IR-A3LB-01A
0 years, female, white, stage:Stage IB, dead, 2032 days
819.8
TCGA-C5-A1M8-01A
0 years, female, white, stage:Stage IB, alive, 919 days
810.0
TCGA-EA-A43B-01A
0 years, female, white, stage:Stage IB, alive, 791 days
807.3
TCGA-EA-A3HS-01A
0 years, female, white, stage:Stage IB, alive, 959 days
800.8
TCGA-DR-A0ZL-01A
0 years, female, asian, stage:Stage IB, alive, 2669 days
799.9
TCGA-C5-A1BL-01A
0 years, female, white, stage:Stage IB, alive, 5271 days
797.2
TCGA-EK-A2RE-01A
0 years, female, white, stage:Stage IIA, alive, 57 days
779.6
TCGA-MY-A5BF-01A
0 years, female, white, stage:Stage IIA, alive, 634 days
773.7
TCGA-EK-A2RK-01A
0 years, female, white, stage:Stage IA, alive, 13 days
773.7
TCGA-C5-A7CL-01A
0 years, female, white, stage:Stage IIIB, dead, 471 days
773.5
TCGA-VS-A94X-01A
0 years, female, black or african american, stage:Stage IIB, dead, 506 days
771.0
TCGA-DS-A5RQ-01A
0 years, female, white, stage:Stage IB, alive, 512 days
770.3
TCGA-Q1-A5R2-01A
0 years, female, white, stage:'--, alive, 499 days
770.1
TCGA-MY-A5BE-01A
0 years, female, black or african american, stage:Stage IB, alive, 1066 days
767.7
TCGA-Q1-A6DW-01A
0 years, female, white, stage:Stage I, alive, 534 days
759.7
TCGA-XS-A8TJ-01A
0 years, female, black or african american, stage:Stage IB, alive, 890 days
753.5
TCGA-DS-A1OC-01A
0 years, female, white, stage:Stage IB, alive, 376 days
752.9
TCGA-JW-A5VG-01A
0 years, female, american indian or alaska native, stage:Stage IIA, alive, 834 days
752.7
TCGA-MA-AA3W-01A
0 years, female, white, stage:Stage IB, alive, 685 days
746.3
TCGA-EA-A5ZD-01A
0 years, female, asian, stage:Stage IB, alive, 830 days
745.9
TCGA-FU-A3HY-01A
0 years, female, white, stage:Stage IB, alive, 954 days
743.1
TCGA-FU-A2QG-01A
0 years, female, white, stage:Stage IB, alive, 579 days
738.2
TCGA-HM-A3JK-01A
0 years, female, white, stage:Stage IIA, alive, 632 days
736.9
TCGA-VS-A8QA-01A
0 years, female, stage:Stage IB, alive, 1099 days
727.9
TCGA-EA-A3Y4-01A
0 years, female, white, stage:Stage IB, alive, 1122 days
726.3
TCGA-C5-A1MN-01A
0 years, female, white, stage:Stage IIIB, dead, 1245 days
710.7
TCGA-IR-A3LI-01A
0 years, female, white, stage:Stage IVB, alive, 2493 days
709.6
TCGA-EK-A2RC-01A
0 years, female, stage:Stage IB, alive, 129 days
707.6
TCGA-VS-A9UV-01A
0 years, female, stage:Stage IVA, dead, 104 days
706.6
TCGA-Q1-A5R3-01A
0 years, female, white, stage:'--, alive, 485 days
706.5
TCGA-VS-A8QH-01A
0 years, female, white, stage:Stage IB, dead, 1210 days
706.3
TCGA-JW-A5VJ-01A
0 years, female, american indian or alaska native, stage:Stage IIB, alive, 652 days
705.6
TCGA-VS-A94W-01A
0 years, female, white, stage:Stage IIB, alive, 1243 days
699.4
TCGA-DS-A1OD-01A
0 years, female, white, stage:Stage IB, alive, 3874 days
699.1
TCGA-ZX-AA5X-01A
0 years, female, white, stage:Stage IIIB, alive, 119 days
687.7
TCGA-EA-A97N-01A
0 years, female, white, stage:Stage IB, alive, 11 days
681.1
TCGA-BI-A20A-01A
0 years, female, white, stage:Stage IB, alive, 720 days
678.1
TCGA-C5-A7CG-01A
0 years, female, white, stage:Stage IB, alive, 6408 days
673.8
TCGA-FU-A3NI-01A
0 years, female, white, stage:Stage IB, dead, 638 days
667.6
TCGA-VS-A957-01A
0 years, female, white, stage:Stage IB, alive, 1688 days
660.4
TCGA-HM-A3JJ-01A
0 years, female, black or african american, stage:Stage IB, dead, 659 days
658.0
TCGA-C5-A907-01A
0 years, female, white, stage:Stage IB, alive, 448 days
656.5
TCGA-JX-A3Q0-01A
0 years, female, black or african american, stage:Stage III, alive, 6375 days
655.1
TCGA-MA-AA42-01A
0 years, female, white, stage:Stage IIB, alive, 259 days
653.9
TCGA-VS-A94Z-01A
0 years, female, white, stage:Stage IIB, alive, 1015 days
652.5
TCGA-VS-A9UM-01A
0 years, female, black or african american, stage:Stage IVB, dead, 829 days
652.3
TCGA-C5-A3HF-01A
0 years, female, white, stage:Stage IB, dead, 543 days
648.7
TCGA-GH-A9DA-01A
0 years, female, white, stage:Stage IB, alive, 540 days
647.2
TCGA-EK-A2H1-01A
0 years, female, white, stage:Stage IB, alive, 799 days
645.8
TCGA-C5-A3HL-01A
0 years, female, white, stage:Stage IB, alive, 621 days
643.5
TCGA-JW-A5VK-01A
0 years, female, black or african american, stage:Stage IB, alive, 623 days
643.5
TCGA-EK-A2PG-01A
0 years, female, black or african american, stage:'--, alive, 46 days
643.3
TCGA-EK-A2RB-01A
0 years, female, white, stage:Stage IVB, alive, 9 days
637.1
TCGA-MA-AA3Z-01A
0 years, female, white, stage:Stage IB, alive, 595 days
636.8
TCGA-EA-A5FO-01A
0 years, female, white, stage:Stage IB, alive, 815 days
630.1
TCGA-FU-A3TX-01A
0 years, female, stage:Stage IB, alive, 45 days
628.0
TCGA-HM-A4S6-01A
0 years, female, white, stage:Stage IIIB, alive, 454 days
625.8
TCGA-VS-A8EI-01A
0 years, female, white, stage:Stage IIB, alive, 729 days
621.9
TCGA-FU-A23L-01A
0 years, female, white, stage:Stage IIA, alive, 725 days
608.3
TCGA-EK-A3GJ-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IB, alive, 3 days
606.6
TCGA-4J-AA1J-01A
0 years, female, white, stage:Stage IB, alive, 542 days
605.2
TCGA-Q1-A73Q-01A
0 years, female, white, stage:Stage I, alive, 284 days
604.4
TCGA-VS-A9U6-01A
0 years, female, white, stage:Stage IVB, alive, 1320 days
603.2
TCGA-EA-A5ZE-01A
0 years, female, asian, stage:Stage IB, alive, 829 days
603.0
TCGA-FU-A3YQ-01A
0 years, female, white, stage:Stage IB, alive, 861 days
601.8
TCGA-DS-A3LQ-01A
0 years, female, stage:Stage IIIB, alive, 699 days
600.6
TCGA-VS-A9U5-01A
0 years, female, white, stage:Stage IIB, alive, 1535 days
600.1
TCGA-C5-A2LV-01A
0 years, female, black or african american, stage:Stage IB, alive, 2234 days
598.2
TCGA-C5-A7UC-01A
0 years, female, white, stage:Stage IB, dead, 523 days
589.0
TCGA-MA-AA41-01A
0 years, female, white, stage:Stage IIB, alive, 279 days
587.4
TCGA-VS-A8QF-01A
0 years, female, white, stage:Stage IIB, alive, 1800 days
586.7
TCGA-EA-A5ZF-01A
0 years, female, asian, stage:Stage IB, alive, 828 days
585.0
TCGA-EK-A2R7-01A
0 years, female, white, stage:Stage IB, alive, 27 days
580.3
TCGA-VS-A8EK-01A
0 years, female, white, stage:Stage IVA, dead, 829 days
579.6
TCGA-DG-A2KJ-01A
0 years, female, stage:Stage IIIB, alive, 2893 days
578.9
TCGA-EA-A3QE-01A
0 years, female, white, stage:Stage IB, alive, 761 days
577.6
TCGA-DS-A1OB-01A
0 years, female, white, stage:Stage IB, dead, 861 days
577.2
TCGA-C5-A901-01A
0 years, female, white, stage:'--, alive, 518 days
576.3
TCGA-C5-A1ME-01A
0 years, female, white, stage:Stage IB, alive, 1756 days
573.4
TCGA-ZJ-A8QR-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage I, dead, 582 days
571.9
TCGA-MU-A51Y-01A
0 years, female, white, stage:Stage IIA, alive, 854 days
566.5
TCGA-VS-A950-01A
0 years, female, stage:Stage IIIA, alive, 1221 days
564.8
TCGA-VS-A9UT-01A
0 years, female, asian, stage:Stage IB, alive, 482 days
562.7
TCGA-VS-A8QM-01A
0 years, female, stage:Stage IVB, dead, 951 days
560.5
TCGA-EK-A2R9-01A
0 years, female, white, stage:Stage IB, alive, 4 days
551.8
TCGA-EK-A2GZ-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 383 days
551.8
TCGA-HG-A2PA-01A
0 years, female, white, stage:Stage IB, dead, 773 days
549.9
TCGA-EK-A2PK-01A
0 years, female, white, stage:Stage IB, alive, 12 days
546.7
TCGA-C5-A8XI-01A
0 years, female, black or african american, stage:Stage IB, alive, 254 days
544.2
TCGA-C5-A1MJ-01A
0 years, female, white, stage:Stage IB, dead, 14 days
538.6
TCGA-VS-A958-01A
0 years, female, white, stage:Stage IIB, alive, 1525 days
535.7
TCGA-C5-A8XH-01A
0 years, female, white, stage:Stage IB, dead, 1394 days
532.2
TCGA-UC-A7PG-01A
0 years, female, white, stage:Stage IIIB, dead, 370 days
532.2
TCGA-LP-A4AU-01A
0 years, female, asian, stage:Stage IIIB, alive, 343 days
530.6
TCGA-C5-A2LT-01A
0 years, female, white, stage:Stage IB, alive, 2226 days
527.6
TCGA-LP-A4AW-01A
0 years, female, asian, stage:Stage IA, alive, 27 days
526.9
TCGA-EA-A4BA-01A
0 years, female, white, stage:Stage IB, alive, 755 days
526.9
TCGA-C5-A8XJ-01A
0 years, female, white, stage:Stage IB, alive, 4467 days
525.1
TCGA-VS-A8EB-01A
0 years, female, white, stage:Stage IIIB, dead, 305 days
523.8
TCGA-FU-A5XV-01A
0 years, female, white, stage:Stage IIIB, alive, 321 days
522.9
TCGA-BI-A0VR-01A
0 years, female, white, stage:Stage IIIB, alive, 1505 days
520.0
TCGA-EA-A439-01A
0 years, female, asian, stage:Stage IIA, alive, 965 days
519.8
TCGA-C5-A902-01A
0 years, female, black or african american, stage:Stage IB, alive, 149 days
516.0
TCGA-VS-A9UB-01A
0 years, female, stage:Stage IIB, alive, 911 days
515.2
TCGA-DS-A7WH-01A
0 years, female, white, stage:Stage IB, alive, 533 days
513.1
TCGA-EA-A1QT-01A
0 years, female, white, stage:Stage IB, alive, 1243 days
512.1
TCGA-LP-A5U3-01A
0 years, female, asian, stage:Stage IB, alive, 25 days
509.2
TCGA-VS-A8EH-01A
0 years, female, stage:Stage IIIB, alive, 986 days
503.8
TCGA-DG-A2KM-01A
0 years, female, stage:Stage IB, alive, 1946 days
500.2
TCGA-C5-A1MP-01A
0 years, female, black or african american, stage:Stage IB, alive, 109 days
494.9
TCGA-VS-A9V0-01A
0 years, female, stage:Stage IB, alive, 573 days
494.1
TCGA-Q1-A5R1-01A
0 years, female, white, stage:Stage IB, alive, 474 days
492.8
TCGA-EA-A556-01A
0 years, female, white, stage:Stage IB, alive, 453 days
492.8
TCGA-EX-A69L-01A
0 years, female, asian, stage:Stage IB, alive, 602 days
487.0
TCGA-EA-A50E-01A
0 years, female, asian, stage:Stage IVA, dead, 227 days
485.6
TCGA-VS-A954-01A
0 years, female, stage:Stage IIIB, alive, 1714 days
483.9
TCGA-MU-A5YI-01A
0 years, female, black or african american, stage:Stage IA, alive, 1053 days
481.3
TCGA-VS-A9V1-01A
0 years, female, white, stage:Stage IVB, dead, 157 days
480.3
TCGA-C5-A7CO-01A
0 years, female, white, stage:Stage IB, alive, 4482 days
479.2
TCGA-MY-A5BD-01A
0 years, female, white, stage:Stage IIB, alive, 1667 days
478.8
TCGA-VS-A9U7-01A
0 years, female, white, stage:Stage IB, alive, 1472 days
477.1
TCGA-RA-A741-01A
0 years, female, white, stage:Stage IIB, alive, 444 days
470.8
TCGA-C5-A7CK-01A
0 years, female, white, stage:Stage IVA, dead, 4086 days
470.1
TCGA-C5-A1M6-01A
0 years, female, white, stage:Stage IIB, dead, 955 days
462.6
TCGA-LP-A7HU-01A
0 years, female, asian, stage:Stage II, alive, 406 days
462.4
TCGA-LP-A5U2-01A
0 years, female, asian, stage:Stage IIIB, alive, 9 days
455.0
TCGA-VS-A953-01A
0 years, female, stage:Stage IVA, dead, 477 days
450.6
TCGA-EX-A3L1-01A
0 years, female, white, stage:Stage IIA, alive, 463 days
450.2
TCGA-PN-A8MA-01A
0 years, female, black or african american, stage:Stage IIB, alive, 90 days
446.8
TCGA-EK-A2RM-01A
0 years, female, white, stage:Stage IB, alive, 50 days
444.7
TCGA-Q1-A73O-01A
0 years, female, stage:Stage IB, alive, 428 days
440.7
TCGA-EK-A3GN-01A
0 years, female, white, stage:Stage IIIB, alive, 27 days
438.6
TCGA-MY-A913-01A
0 years, female, black or african american, stage:Stage IIA, alive, 524 days
434.9
TCGA-VS-A9UY-01A
0 years, female, stage:Stage IVB, dead, 555 days
433.5
TCGA-EA-A6QX-01A
0 years, female, asian, stage:Stage IIIB, alive, 730 days
425.8
TCGA-JW-A5VL-01A
0 years, female, american indian or alaska native, stage:Stage IB, alive, 474 days
424.8
TCGA-EK-A2R8-01A
0 years, female, white, stage:Stage IB, alive, 44 days
423.7
TCGA-C5-A7UI-01A
0 years, female, black or african american, stage:Stage IB, dead, 2888 days
422.1
TCGA-VS-A9UC-01A
0 years, female, stage:Stage IIB, alive, 825 days
420.2
TCGA-LP-A4AX-01A
0 years, female, asian, stage:Stage IB, alive, 380 days
419.8
TCGA-EA-A3HR-01A
0 years, female, white, stage:Stage II, alive, 940 days
416.4
TCGA-DG-A2KK-01A
0 years, female, stage:Stage IIIB, alive, 2496 days
416.1
TCGA-C5-A7X3-01A
0 years, female, white, stage:Stage IIIB, dead, 284 days
415.8
TCGA-EA-A411-01A
0 years, female, white, stage:Stage IB, alive, 747 days
414.2
TCGA-DG-A2KH-01A
0 years, female, stage:Stage IB, alive, 34 days
412.3
TCGA-VS-AA62-01A
0 years, female, white, stage:Stage IIB, dead, 469 days
411.4
TCGA-C5-A7UH-01A
0 years, female, white, stage:Stage IIIB, alive, 3988 days
411.2
TCGA-ZJ-AAXU-01A
0 years, female, white, stage:Stage IIB, alive, 5 days
408.7
TCGA-IR-A3L7-01A
0 years, female, white, stage:Stage IB, alive, 4483 days
408.6
TCGA-FU-A3HZ-01A
0 years, female, white, stage:Stage IIA, alive, 1103 days
407.5
TCGA-2W-A8YY-01A
0 years, female, white, stage:Stage IB, alive, 533 days
402.8
TCGA-Q1-A73S-01A
0 years, female, white, stage:Stage IB, alive, 688 days
395.1
TCGA-C5-A8ZZ-01A
0 years, female, white, stage:Stage IIB, alive, 636 days
392.1
TCGA-DS-A0VL-01A
0 years, female, white, stage:Stage IB, dead, 1692 days
391.0
TCGA-C5-A8XK-01A
0 years, female, black or african american, stage:'--, alive, 3039 days
386.9
TCGA-VS-A959-01A
0 years, female, stage:Stage IIB, alive, 1561 days
386.5
TCGA-VS-A9V2-01A
0 years, female, white, stage:Stage IB, alive, 555 days
385.6
TCGA-FU-A770-01A
0 years, female, white, stage:Stage IIIB, alive, 34 days
385.4
TCGA-VS-A8EC-01A
0 years, female, white, stage:Stage IIIB, alive, 1415 days
380.7
TCGA-C5-A7CM-01A
0 years, female, white, stage:Stage IB, alive, 619 days
371.3
TCGA-DS-A1OA-01A
0 years, female, asian, stage:Stage IB, dead, 879 days
369.5
TCGA-EA-A410-01A
0 years, female, white, stage:Stage IIA, alive, 803 days
366.0
TCGA-C5-A905-01A
0 years, female, black or african american, stage:Stage IB, alive, 4879 days
365.0
TCGA-C5-A7XC-01A
0 years, female, white, stage:Stage IB, alive, 1551 days
357.0
TCGA-VS-A9UZ-01A
0 years, female, white, stage:Stage IB, alive, 2044 days
348.0
TCGA-JW-A69B-01A
0 years, female, white, stage:Stage IB, alive, 863 days
346.1
TCGA-FU-A57G-01A
0 years, female, white, stage:Stage IB, alive, 1078 days
344.9
TCGA-EX-A449-01A
0 years, female, white, stage:Stage IVB, alive, 447 days
344.0
TCGA-C5-A2M1-01A
0 years, female, white, stage:Stage IB, alive, 1169 days
343.8
TCGA-JW-A5VH-01A
0 years, female, american indian or alaska native, stage:Stage IVB, dead, 100 days
341.0
TCGA-UC-A7PI-01A
0 years, female, white, stage:Stage IB, alive, 2114 days
339.4
TCGA-JX-A3Q8-01A
0 years, female, asian, stage:Stage IB, alive, 1357 days
338.6
TCGA-EX-A69M-01A
0 years, female, white, stage:Stage IB, dead, 253 days
337.1
TCGA-EK-A2RL-01A
0 years, female, black or african american, stage:Stage IB, dead, 1453 days
333.2
TCGA-VS-A952-01A
0 years, female, white, stage:Stage IB, alive, 1778 days
332.8
TCGA-WL-A834-01A
0 years, female, white, stage:'--, alive, 791 days
329.7
TCGA-C5-A2LS-01A
0 years, female, white, stage:Stage IB, alive, 1345 days
324.2
TCGA-C5-A8YQ-01A
0 years, female, white, stage:Stage IB, dead, 715 days
323.2
TCGA-VS-A9UJ-01A
0 years, female, stage:Stage IIB, dead, 52 days
322.0
TCGA-VS-A9UR-01A
0 years, female, white, stage:Stage IIA, alive, 793 days
319.1
TCGA-VS-A9UQ-01A
0 years, female, stage:Stage IB, alive, 1263 days
318.2
TCGA-C5-A8YT-01A
0 years, female, white, stage:Stage IB, dead, 633 days
317.7
TCGA-C5-A1MQ-01A
0 years, female, white, stage:Stage IIA, alive, 1031 days
313.4
TCGA-Q1-A73P-01A
0 years, female, white, stage:Stage IB, alive, 483 days
302.3
TCGA-Q1-A6DV-01A
0 years, female, asian, stage:Stage IB, alive, 491 days
300.2
TCGA-IR-A3LF-01A
0 years, female, white, stage:Stage IB, alive, 2949 days
298.7
TCGA-FU-A40J-01A
0 years, female, white, stage:Stage IIIB, alive, 426 days
298.5
TCGA-EK-A2IR-01A
0 years, female, white, stage:Stage IB, alive, 3442 days
285.5
TCGA-C5-A2M2-01A
0 years, female, white, stage:Stage IB, dead, 1011 days
285.0
TCGA-HM-A6W2-01A
0 years, female, black or african american, stage:Stage IVB, alive, 287 days
284.4
TCGA-IR-A3LK-01A
0 years, female, white, stage:Stage IB, dead, 908 days
282.1
TCGA-IR-A3LA-01A
0 years, female, white, stage:Stage IB, alive, 4172 days
277.7
TCGA-VS-A9V3-01A
0 years, female, white, stage:Stage IVB, alive, 540 days
276.5
TCGA-EK-A2H0-01A
0 years, female, white, stage:Stage IIB, alive, 1847 days
273.5
TCGA-VS-A8EJ-01A
0 years, female, white, stage:Stage IIB, dead, 607 days
272.9
TCGA-FU-A23K-01A
0 years, female, white, stage:Stage IIIB, alive, 372 days
272.7
TCGA-EK-A3GK-01A
0 years, female, white, stage:Stage IB, alive, 15 days
260.5
TCGA-C5-A1M9-01A
0 years, female, white, stage:Stage IB, dead, 1065 days
259.2
TCGA-EK-A2PM-01A
0 years, female, white, stage:Stage IIB, alive, 18 days
259.0
TCGA-EK-A2RJ-01A
0 years, female, white, stage:Stage IB, alive, 53 days
256.6
TCGA-VS-A8Q9-01A
0 years, female, white, stage:Stage IB, alive, 1630 days
250.4
TCGA-EX-A8YF-01A
0 years, female, white, stage:Stage IB, alive, 473 days
248.9
TCGA-VS-A9UP-01A
0 years, female, stage:Stage IIA, alive, 1444 days
238.6
TCGA-VS-A9V4-01A
0 years, female, white, stage:Stage IVA, dead, 132 days
231.6
TCGA-FU-A3EO-01A
0 years, female, white, stage:Stage IIB, alive, 490 days
227.9
TCGA-Q1-A73R-01A
0 years, female, white, stage:Stage I, alive, 567 days
218.5
TCGA-ZJ-A8QQ-01A
0 years, female, white, stage:Stage IIB, alive, 2056 days
218.3
TCGA-C5-A1MI-01A
0 years, female, white, stage:Stage IB, dead, 1083 days
203.8
TCGA-C5-A1MF-01A
0 years, female, white, stage:Stage IB, alive, 1617 days
185.1
TCGA-DS-A7WF-01A
0 years, female, stage:Stage IB, dead, 492 days
172.3
TCGA-VS-A9UL-01A
0 years, female, white, stage:Stage IIIB, dead, 442 days
170.9
TCGA-VS-A9UO-01A
0 years, female, white, stage:Stage IIB, alive, 1456 days
150.4
TCGA-VS-A9V5-01A
0 years, female, white, stage:Stage IIB, dead, 494 days
135.5
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CERVICAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.