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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
32.3
nTPM
GTEx:
32.3
nTPM
FANTOM5:
16.6
Scaled Tags Per Million
Pig:
6.7
nTPM
Mouse:
34.4
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
32.3
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 32.3
Samples: 105
Max nTPM: 417.2
Min nTPM: 10.6
Std nTPM: 54.7
Median nTPM:
35_1
74 years, female
417.2
318_1
68 years, male
345.3
18_1
88 years, male
249.0
81_1
67 years, male
68.3
321_1
62 years, female
67.2
162_1
79 years, female
62.1
142_1
61 years, female
52.4
405_1
91 years, male
49.3
447_1
81 years, male
47.5
266_1
85 years, male
45.7
406_1
79 years, male
43.6
413_1
59 years, female
43.2
404_1
82 years, female
42.9
320_1
89 years, female
42.5
389_1
86 years, female
38.1
452_1
88 years, female
37.5
286_1
68 years, female
33.1
356_1
87 years, female
33.1
503_1
68 years, male
32.3
379_1
60 years, male
31.7
2_1
77 years, female
31.5
149_1
88 years, male
30.6
501_1
88 years, male
30.3
353_1
82 years, female
28.4
288_1
66 years, female
28.2
4_1
88 years, female
27.7
314_1
67 years, male
26.6
17_1
71 years, male
25.8
394_1
75 years, female
25.6
495_1
57 years, female
24.3
217_1
76 years, male
24.2
350_1
84 years, female
24.0
317_1
60 years, male
23.9
139_1
64 years, female
23.8
293_1
68 years, female
22.8
163_1
78 years, male
22.2
351_1
91 years, male
21.6
466_1
57 years, female
21.4
243_1
75 years, male
21.2
352_1
62 years, male
21.2
6_1
73 years, female
21.1
246_1
77 years, male
21.0
316_1
62 years, male
21.0
376_1
75 years, female
21.0
499_1
55 years, female
21.0
526_1
61 years, male
20.4
145_1
84 years, male
20.1
117_1
61 years, male
20.0
307_1
66 years, female
20.0
322_1
76 years, male
20.0
517_1
88 years, male
19.8
89_1
63 years, male
19.5
313_1
79 years, female
19.5
319_1
81 years, male
19.5
490_1
67 years, female
19.4
265_1
87 years, male
19.3
425_1
59 years, female
19.3
295_1
61 years, female
19.0
189_1
76 years, male
18.7
354_1
81 years, female
18.7
218_1
71 years, female
18.5
254_1
77 years, female
18.3
308_1
70 years, female
18.3
415_1
77 years, female
18.0
115_1
83 years, male
17.9
172_1
72 years, female
17.9
414_1
84 years, female
17.9
377_1
82 years, female
17.8
384_1
83 years, male
17.7
9_1
66 years, female
17.4
153_1
70 years, female
17.4
386_1
76 years, male
17.0
173_1
67 years, male
16.8
42_1
85 years, male
16.6
355_1
70 years, female
16.6
120_1
70 years, female
16.5
43_1
64 years, female
16.4
315_1
62 years, female
16.3
177_1
74 years, male
16.2
348_1
84 years, male
16.2
264_1
73 years, female
16.1
518_1
75 years, female
15.8
137_1
83 years, male
15.7
396_1
62 years, male
15.7
229_1
69 years, female
15.6
292_1
71 years, male
15.5
491_1
89 years, female
15.5
41_1
94 years, female
15.4
291_1
76 years, male
15.4
506_1
65 years, male
15.3
335_1
73 years, female
15.2
126_1
63 years, male
15.1
375_1
74 years, female
15.1
349_1
83 years, male
14.9
251_1
78 years, male
14.8
468_1
89 years, male
14.5
32_1
67 years, male
14.3
311_1
78 years, male
14.3
99_1
64 years, male
13.7
109_1
81 years, female
13.5
324_1
76 years, male
12.9
480_1
63 years, male
12.9
119_1
70 years, female
12.8
237_1
82 years, male
12.5
347_1
72 years, male
10.6
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
