HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:19.1 nTPM
HPA Brain:905.7 nTPM
GTEx:19.1 nTPM
FANTOM5:19.0 Scaled Tags Per Million
Pig:7.9 nTPM
Mouse:36.7 nTPM
Allen mouse:3.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA037795Antibody HPA038419
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 905.7
Sample id Sample description nTPM
Hippocampus
nTPM: 571.4
1911 Female, age 85, right hemisphere 795.0
2529 Female, age 94, left hemisphere 714.1
1898 Male, age 80, left hemisphere 630.2
1855 Male, age 76, left hemisphere 555.6
2621 Female, age 67, right hemisphere 397.3
2148 Female, age 91, left hemisphere 336.3
Dentate gyrus
nTPM: 799.2
2528 Male, age 74, both hemispheres 1288.3
2010 Male, age 76, both hemispheres 957.4
2246 Female, age 85, both hemispheres 703.5
2530 Female, age 94, left hemisphere 636.6
1927 Female, age 91, both hemispheres 609.3
2531 Female, age 67, both hemispheres 600.2
Entorhinal gyrus
nTPM: 537.9
2764 Male, age 80, right hemisphere 961.4
1938 Female, age 85, left hemisphere 549.6
1787 Male, age 76, left hemisphere 511.7
2117 Female, age 91, right hemisphere 448.9
2686 Male, age 75, right hemisphere 420.0
2613 Female, age 94, left hemisphere 336.0
Hippocampus, CA1
nTPM: 899.7
1873 Female, age 85, both hemispheres 1291.1
2082 Female, age 91, right hemisphere 925.1
2527 Male, age 74, both hemispheres 879.9
2749 Male, age 80, left hemisphere 832.7
2045 Male, age 76, both hemispheres 569.9
Hippocampus, CA2
nTPM: 805.0
2249 Male, age 74, both hemispheres 1451.3
1892 Male, age 76, both hemispheres 853.3
2113 Female, age 91, right hemisphere 813.7
1940 Female, age 85, left hemisphere 693.2
2437 Female, age 94, left hemisphere 690.3
1963 Male, age 80, left hemisphere 328.4
Hippocampus, CA3
nTPM: 905.7
2436 Male, age 74, both hemispheres 1940.5
1891 Female, age 85, both hemispheres 1194.6
1867 Male, age 76, both hemispheres 1062.8
2137 Male, age 80, left hemisphere 636.4
2620 Female, age 94, left hemisphere 307.3
2861 Female, age 67, both hemispheres 292.7
Parahippocampal cortex
nTPM: 691.6
2245 Female, age 91, both hemispheres 1067.2
2250 Female, age 67, right hemisphere 1040.8
2018 Male, age 76, both hemispheres 911.2
2532 Female, age 72, left hemisphere 783.5
1990 Female, age 91, right hemisphere 698.3
1933 Female, age 85, both hemispheres 679.9
1850 Male, age 80, both hemispheres 669.9
2693 Female, age 94, both hemispheres 555.5
2692 Male, age 74, both hemispheres 285.9
2622 Female, age 67, right hemisphere 223.3
Perirhinal gyrus
nTPM: 665.9
1847 Female, age 91, left hemisphere 775.7
2521 Female, age 94, right hemisphere 744.3
1841 Female, age 85, right hemisphere 697.8
2848 Male, age 76, right hemisphere 606.2
1794 Male, age 80, right hemisphere 505.3
Subiculum
nTPM: 801.7
1977 Female, age 85, both hemispheres 1552.0
2729 Female, age 91, right hemisphere 868.6
2042 Male, age 76, both hemispheres 690.4
1901 Male, age 80, both hemispheres 640.9
2438 Female, age 94, left hemisphere 559.2
2619 Male, age 74, both hemispheres 498.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 19.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.1
Samples: 197

Max nTPM: 195.3
Min nTPM: 7.8
Std nTPM: 13.4
Median nTPM: 17.7
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 195.3
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 37.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 37.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 32.5
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 29.3
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 28.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 28.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 28.1
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 27.1
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 26.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 26.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 19.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 19.0
FF:10153-102I9 76 years, female 23.5
FF:10169-103B7 60 years, female 14.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 7.9
Pig sample Sample description nTPM
Subiculum
nTPM: 6.3
Samples: 4

Max nTPM: 8.7
Min nTPM: 4.9
Sample A Female 8.7
Sample B Female 6.4
Sample C Male 5.3
Sample D Male 4.9
Dorsal hippocampus
nTPM: 8.0
Samples: 4

Max nTPM: 9.7
Min nTPM: 5.6
Sample A Female 9.7
Sample B Female 8.3
Sample C Male 8.2
Sample D Male 5.6
Entorhinal cortex
nTPM: 6.9
Samples: 4

Max nTPM: 8.5
Min nTPM: 5.5
Sample A Female 7.6
Sample B Female 8.5
Sample C Male 5.8
Sample D Male 5.5
Ventral hippocampus
nTPM: 7.0
Samples: 4

Max nTPM: 8.3
Min nTPM: 5.5
Sample A Female 8.3
Sample B Female 5.5
Sample C Male 7.6
Sample D Male 6.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 36.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 34.5
Samples: 4

Max nTPM: 35.2
Min nTPM: 33.7
Sample A Male 34.3
Sample B Male 35.2
Sample C Female 34.9
Sample D Female 33.7
Hippocampal formation
nTPM: 36.7
Samples: 4

Max nTPM: 40.6
Min nTPM: 34.4
Sample A Male 40.6
Sample B Male 34.4
Sample C Female 36.9
Sample D Female 34.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 3.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.0
68341943 Antisense, RP_041207_02_E02, Mouse strain C57BL/6J (56 days, male) 3.0

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