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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MDK is not prognostic in Ovary Serous Cystadenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1337.2
Number of samples
349
Samples
Sample
Description
TPM
TCGA-29-A5NZ-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1088 days
16903.2
TCGA-13-0916-01A
0 years, female, white, stage:Stage IIIC, alive, 1785 days
6156.6
TCGA-61-2088-01A
0 years, female, white, stage:Stage IIIC, alive, 145 days
5878.8
TCGA-61-1738-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1089 days
5839.6
TCGA-13-1492-01A
0 years, female, white, stage:Stage IIIC, dead, 3819 days
4680.6
TCGA-04-1362-01A
0 years, female, white, stage:Stage IIC, dead, 1348 days
4558.7
TCGA-13-1477-01A
0 years, female, white, stage:Stage IV, dead, 1662 days
4183.7
TCGA-24-1544-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 820 days
4141.7
TCGA-61-2012-01A
0 years, female, white, stage:Stage IIC, alive, 932 days
4128.1
TCGA-10-0927-01A
0 years, female, stage:Stage IIIC, dead, 2490 days
4102.8
TCGA-09-0369-01A
0 years, female, white, stage:Stage IIIC, dead, 1082 days
4065.6
TCGA-04-1365-01A
0 years, female, white, stage:Stage IIIB, alive, 947 days
3839.2
TCGA-29-1691-01A
0 years, female, white, stage:Stage IIIC, dead, 1470 days
3755.3
TCGA-09-0364-01A
0 years, female, white, stage:Stage IIC, dead, 887 days
3603.2
TCGA-24-1469-01A
0 years, female, white, stage:Stage IIIC, alive, 277 days
3551.9
TCGA-24-1567-01A
0 years, female, white, stage:Stage IIIB, dead, 524 days
3463.7
TCGA-24-1419-01A
0 years, female, white, stage:Stage IIIC, alive, 239 days
3434.0
TCGA-13-0730-01A
0 years, female, white, stage:Stage IIIC, dead, 542 days
3408.9
TCGA-13-0800-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
3252.4
TCGA-61-1907-01A
0 years, female, white, stage:Stage IIIC, alive, 952 days
3233.3
TCGA-30-1860-01A
0 years, female, white, stage:Stage IIIC, dead, 1366 days
3080.1
TCGA-09-0366-01A
0 years, female, white, stage:Stage IIIC, dead, 1757 days
3057.3
TCGA-24-2035-01A
0 years, female, white, stage:Stage IIIC, dead, 857 days
3047.2
TCGA-09-1666-01A
0 years, female, white, stage:Stage IIIC, alive, 1752 days
2977.6
TCGA-23-1809-01A
0 years, female, white, stage:Stage IIC, alive, 16 days
2966.9
TCGA-13-1407-01A
0 years, female, white, stage:Stage IIIC, alive, 2534 days
2917.5
TCGA-29-1774-01A
0 years, female, white, stage:Stage IIIC, alive, 527 days
2897.1
TCGA-13-1497-01A
0 years, female, white, stage:Stage IIIC, alive, 3871 days
2866.3
TCGA-24-1424-01A
0 years, female, white, stage:Stage IIIC, alive, 183 days
2860.6
TCGA-61-1741-01A
0 years, female, white, stage:Stage IIIB, dead, 1024 days
2859.7
TCGA-25-2398-01A
0 years, female, white, stage:Stage IIIC, dead, 1369 days
2835.4
TCGA-23-1119-01A
0 years, female, white, stage:Stage IIIC, alive, 3953 days
2824.4
TCGA-29-1785-01A
0 years, female, white, stage:Stage IIIC, dead, 1104 days
2823.5
TCGA-04-1651-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
2816.1
TCGA-25-1635-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
2671.8
TCGA-24-2020-01A
0 years, female, white, stage:Stage IIIC, dead, 4624 days
2648.3
TCGA-13-0795-01A
0 years, female, white, stage:Stage IIIC, dead, 619 days
2636.8
TCGA-23-1116-01A
0 years, female, white, stage:Stage IIIC, dead, 592 days
2573.4
TCGA-31-1950-01A
0 years, female, white, stage:Stage IIIC, alive, 571 days
2569.1
TCGA-24-1423-01A
0 years, female, white, stage:Stage IIIC, alive, 190 days
2540.0
TCGA-10-0933-01A
0 years, female, white, stage:Stage IIIC, dead, 446 days
2488.0
TCGA-36-1574-01A
0 years, female, asian, stage:Stage IIIC, alive, 686 days
2477.6
TCGA-13-1512-01A
0 years, female, white, stage:Stage IIIC, alive, 442 days
2423.2
TCGA-57-1994-01A
0 years, female, white, stage:'--, alive, 761 days
2404.4
TCGA-13-0891-01A
0 years, female, white, stage:Stage IV, dead, 3128 days
2375.6
TCGA-29-1696-01A
0 years, female, white, stage:Stage IIIC, dead, 1032 days
2302.8
TCGA-25-1312-01A
0 years, female, white, stage:Stage IV, dead, 31 days
2300.1
TCGA-57-1993-01A
0 years, female, white, stage:Stage IIIC, alive, 763 days
2290.6
TCGA-24-1103-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1646 days
2289.9
TCGA-13-0725-01A
0 years, female, white, stage:Stage IIIC, dead, 377 days
2287.0
TCGA-29-2428-01A
0 years, female, white, stage:Stage IIIC, alive, 1372 days
2284.7
TCGA-36-1576-01A
0 years, female, stage:Stage IIIC, alive, 915 days
2266.8
TCGA-25-1630-01A
0 years, female, white, stage:Stage IIIC, dead, 1162 days
2239.9
TCGA-23-1110-01A
0 years, female, white, stage:Stage IIIC, alive, 1658 days
2219.3
TCGA-04-1519-01A
0 years, female, stage:Stage IIIC, alive, 24 days
2177.3
TCGA-13-0887-01A
0 years, female, white, stage:Stage IIIC, dead, 2028 days
2173.2
TCGA-10-0931-01A
0 years, female, white, stage:Stage IIIC, dead, 1000 days
2167.9
TCGA-61-2097-01A
0 years, female, white, stage:Stage IIC, alive, 1844 days
2159.0
TCGA-25-1321-01A
0 years, female, white, stage:Stage IIIC, dead, 1033 days
2157.0
TCGA-09-1669-01A
0 years, female, white, stage:Stage IIIA, alive, 928 days
2102.9
TCGA-24-1844-01A
0 years, female, white, stage:Stage IIIC, alive, 113 days
2086.2
TCGA-10-0938-01A
0 years, female, white, stage:Stage IIIC, dead, 636 days
2085.5
TCGA-61-2101-01A
0 years, female, white, stage:Stage IIIC, dead, 1688 days
2083.5
TCGA-59-A5PD-01A
0 years, female, black or african american, stage:Stage IC, dead, 624 days
2075.6
TCGA-36-1581-01A
0 years, female, white, stage:Stage IIC, alive, 751 days
2072.0
TCGA-24-1847-01A
0 years, female, white, stage:Stage IV, alive, 343 days
2041.4
TCGA-31-1944-01A
0 years, female, white, stage:Stage IIIC, alive, 1386 days
2033.4
TCGA-25-1315-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
2029.4
TCGA-20-0991-01A
0 years, female, white, stage:Stage IIB, alive, 797 days
1994.7
TCGA-04-1332-01A
0 years, female, white, stage:Stage IIIC, dead, 1247 days
1959.1
TCGA-25-1632-01A
0 years, female, white, stage:Stage IV, dead, 1799 days
1955.7
TCGA-23-1122-01A
0 years, female, white, stage:Stage IIIC, dead, 1189 days
1914.0
TCGA-23-1123-01A
0 years, female, white, stage:Stage IIIC, dead, 1018 days
1904.2
TCGA-61-1728-01A
0 years, female, white, stage:Stage IV, alive, 848 days
1873.8
TCGA-OY-A56Q-01A
0 years, female, black or african american, stage:Stage IIA, alive, 576 days
1872.8
TCGA-04-1356-01A
0 years, female, white, stage:Stage IIC, dead, 1499 days
1862.3
TCGA-24-2024-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1769 days
1857.8
TCGA-04-1364-01A
0 years, female, white, stage:Stage IIIC, dead, 1024 days
1854.3
TCGA-04-1343-01A
0 years, female, white, stage:Stage IV, dead, 361 days
1845.5
TCGA-24-2036-01A
0 years, female, white, stage:Stage IIIA, dead, 1947 days
1832.1
TCGA-61-2009-01A
0 years, female, white, stage:Stage IIIC, alive, 1212 days
1822.5
TCGA-04-1341-01A
0 years, female, white, stage:'--, alive, 33 days
1820.4
TCGA-13-0888-01A
0 years, female, white, stage:Stage IIIC, dead, 2811 days
1816.9
TCGA-09-2048-01A
0 years, female, white, stage:Stage IIIC, dead, 138 days
1809.3
TCGA-25-2404-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 883 days
1789.9
TCGA-13-1501-01A
0 years, female, white, stage:Stage IV, dead, 1314 days
1789.1
TCGA-29-2425-01A
0 years, female, white, stage:Stage IIIC, alive, 1977 days
1768.5
TCGA-13-1506-01A
0 years, female, white, stage:Stage IIIC, dead, 1039 days
1761.3
TCGA-24-1413-01A
0 years, female, white, stage:Stage IIIC, alive, 192 days
1729.0
TCGA-61-2102-01A
0 years, female, white, stage:Stage IIIC, dead, 197 days
1682.0
TCGA-04-1530-01A
0 years, female, white, stage:Stage IIIC, dead, 3622 days
1681.3
TCGA-29-1697-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
1672.3
TCGA-24-1549-01A
0 years, female, white, stage:Stage IIIB, dead, 1721 days
1649.9
TCGA-24-2281-01A
0 years, female, white, stage:Stage IIA, alive, 1357 days
1612.2
TCGA-61-2098-01A
0 years, female, white, stage:Stage IIIC, alive, 1993 days
1602.0
TCGA-25-1628-01A
0 years, female, white, stage:Stage IIIC, dead, 627 days
1601.2
TCGA-24-1603-01A
0 years, female, white, stage:Stage IIIB, dead, 2742 days
1595.9
TCGA-20-1682-01A
0 years, female, white, stage:Stage IIIC, alive, 837 days
1592.2
TCGA-61-1919-01A
0 years, female, white, stage:Stage IIIC, dead, 1161 days
1580.8
TCGA-24-1428-01A
0 years, female, white, stage:Stage IIIC, alive, 529 days
1580.3
TCGA-61-1911-01A
0 years, female, white, stage:Stage IIA, alive, 1293 days
1577.4
TCGA-24-1565-01A
0 years, female, white, stage:Stage IIIC, dead, 312 days
1565.3
TCGA-09-2054-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 637 days
1562.7
TCGA-25-1322-01A
0 years, female, white, stage:Stage IV, dead, 91 days
1543.7
TCGA-04-1655-01A
0 years, female, white, stage:Stage IIIB, dead, 1380 days
1540.2
TCGA-25-1313-01A
0 years, female, white, stage:Stage IV, dead, 820 days
1539.3
TCGA-61-2113-01A
0 years, female, white, stage:Stage IIC, dead, 676 days
1536.7
TCGA-25-1627-01A
0 years, female, white, stage:Stage IIIC, dead, 394 days
1528.7
TCGA-23-1109-01A
0 years, female, white, stage:Stage IIIC, dead, 1562 days
1519.8
TCGA-36-1571-01A
0 years, female, white, stage:Stage IIIB, dead, 695 days
1509.4
TCGA-30-1866-01A
0 years, female, white, stage:Stage IV, dead, 1114 days
1497.2
TCGA-13-0727-01A
0 years, female, white, stage:Stage IIIC, dead, 462 days
1496.3
TCGA-13-1488-01A
0 years, female, white, stage:Stage IV, dead, 2154 days
1493.3
TCGA-25-1320-01A
0 years, female, white, stage:Stage IIIC, dead, 1155 days
1487.9
TCGA-04-1361-01A
0 years, female, white, stage:Stage IIIB, alive, 989 days
1455.9
TCGA-25-1626-01A
0 years, female, white, stage:Stage IIIC, dead, 518 days
1425.5
TCGA-13-A5FT-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 2143 days
1417.6
TCGA-13-0724-01A
0 years, female, white, stage:Stage IV, dead, 83 days
1417.5
TCGA-24-1416-01A
0 years, female, white, stage:Stage IV, alive, 194 days
1416.3
TCGA-24-1551-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
1415.5
TCGA-04-1648-01A
0 years, female, white, stage:Stage IIIC, dead, 871 days
1413.8
TCGA-24-1426-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
1407.5
TCGA-23-2077-01A
0 years, female, white, stage:Stage IIIC, alive, 3525 days
1407.2
TCGA-13-0906-01A
0 years, female, white, stage:Stage IIIC, alive, 3619 days
1392.2
TCGA-13-1499-01A
0 years, female, white, stage:Stage IIIC, alive, 3500 days
1376.5
TCGA-23-1120-01A
0 years, female, white, stage:Stage IIIC, alive, 130 days
1373.5
TCGA-04-1514-01A
0 years, female, white, stage:Stage IIIA, dead, 1720 days
1363.8
TCGA-13-0797-01A
0 years, female, white, stage:Stage IIIC, alive, 2121 days
1356.2
TCGA-59-2352-01A
0 years, female, white, stage:Stage IIIC, dead, 286 days
1347.1
TCGA-29-1690-01A
0 years, female, white, stage:Stage IIIC, dead, 1448 days
1338.2
TCGA-20-0987-01A
0 years, female, white, stage:Stage IIIC, dead, 701 days
1334.6
TCGA-29-1762-01A
0 years, female, white, stage:Stage IV, dead, 2634 days
1322.8
TCGA-24-1557-01A
0 years, female, white, stage:Stage IIIC, dead, 1213 days
1314.4
TCGA-25-1877-01A
0 years, female, white, stage:Stage IIIC, dead, 730 days
1311.7
TCGA-13-1509-01A
0 years, female, white, stage:Stage IV, alive, 2438 days
1310.1
TCGA-24-0968-01A
0 years, female, white, stage:Stage IIIC, dead, 598 days
1296.1
TCGA-23-1022-01A
0 years, female, white, stage:Stage IIIC, dead, 1511 days
1293.4
TCGA-5X-AA5U-01A
0 years, female, black or african american, stage:Stage IIC, alive, 361 days
1290.7
TCGA-13-1496-01A
0 years, female, white, stage:Stage IIIC, dead, 129 days
1253.1
TCGA-13-0714-01A
0 years, female, white, stage:Stage IV, dead, 189 days
1252.9
TCGA-29-1769-01A
0 years, female, white, stage:Stage IIIC, alive, 699 days
1222.0
TCGA-25-1323-01A
0 years, female, white, stage:Stage IIIC, dead, 395 days
1216.8
TCGA-29-1763-01A
0 years, female, black or african american, stage:Stage IIC, alive, 2032 days
1214.7
TCGA-24-1418-01A
0 years, female, white, stage:Stage IIIC, alive, 243 days
1182.2
TCGA-13-1489-01A
0 years, female, white, stage:Stage IIIC, dead, 2553 days
1154.4
TCGA-13-1410-01A
0 years, female, white, stage:Stage IV, alive, 2464 days
1146.0
TCGA-24-1434-01A
0 years, female, white, stage:Stage IIIC, dead, 568 days
1136.9
TCGA-13-1505-01A
0 years, female, white, stage:Stage IIIC, alive, 1998 days
1136.4
TCGA-13-1495-01A
0 years, female, white, stage:Stage IIIC, dead, 2749 days
1134.8
TCGA-24-2033-01A
0 years, female, white, stage:Stage IIIC, dead, 562 days
1133.3
TCGA-10-0937-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
1123.1
TCGA-13-0762-01A
0 years, female, white, stage:Stage IIIC, alive, 3400 days
1122.6
TCGA-09-2051-01A
0 years, female, white, stage:Stage IIIC, alive, 1919 days
1120.8
TCGA-61-2111-01A
0 years, female, white, stage:Stage IV, alive, 3825 days
1117.8
TCGA-24-1435-01A
0 years, female, white, stage:Stage IIIC, dead, 1324 days
1111.0
TCGA-24-2293-01A
0 years, female, white, stage:'--, dead, 506 days
1108.5
TCGA-13-0911-01A
0 years, female, white, stage:Stage IV, dead, 1355 days
1105.2
TCGA-10-0928-01A
0 years, female, white, stage:Stage IIIC, dead, 563 days
1104.2
TCGA-23-1023-01A
0 years, female, white, stage:Stage IIIC, alive, 1233 days
1104.0
TCGA-24-1850-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
1102.8
TCGA-13-1483-01A
0 years, female, white, stage:Stage IIIC, dead, 895 days
1096.9
TCGA-23-1027-01A
0 years, female, white, stage:Stage IIIC, dead, 976 days
1096.9
TCGA-WR-A838-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 304 days
1091.9
TCGA-59-2351-01A
0 years, female, white, stage:Stage IIIC, alive, 3532 days
1090.3
TCGA-24-2027-01A
0 years, female, white, stage:Stage IV, dead, 3337 days
1087.3
TCGA-23-1030-01A
0 years, female, white, stage:Stage IIIC, alive, 886 days
1085.7
TCGA-25-1316-01A
0 years, female, white, stage:Stage IIIC, dead, 1279 days
1085.1
TCGA-59-2363-01A
0 years, female, asian, stage:Stage IIIA, alive, 165 days
1070.6
TCGA-29-1766-01A
0 years, female, white, stage:Stage IIIC, dead, 1199 days
1054.3
TCGA-29-1695-01A
0 years, female, white, stage:Stage IIIC, dead, 1229 days
1043.2
TCGA-04-1542-01A
0 years, female, white, stage:Stage IIIB, dead, 2561 days
1034.3
TCGA-57-1582-01A
0 years, female, white, stage:Stage IIIC, dead, 731 days
1026.1
TCGA-57-1586-01A
0 years, female, white, stage:Stage IIIC, alive, 679 days
1020.7
TCGA-04-1536-01A
0 years, female, black or african american, stage:Stage IV, dead, 885 days
1019.4
TCGA-25-1634-01A
0 years, female, white, stage:Stage IIIC, dead, 1091 days
1010.6
TCGA-24-2290-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
1009.7
TCGA-23-1111-01A
0 years, female, white, stage:Stage IIIC, alive, 98 days
990.2
TCGA-04-1350-01A
0 years, female, white, stage:Stage IIIC, dead, 1946 days
989.2
TCGA-29-1784-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
988.0
TCGA-25-2401-01A
0 years, female, white, stage:Stage IIIC, dead, 90 days
984.1
TCGA-13-0920-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
982.4
TCGA-04-1331-01A
0 years, female, white, stage:Stage IIIC, dead, 1336 days
975.5
TCGA-24-1104-01A
0 years, female, white, stage:Stage IV, dead, 1933 days
970.5
TCGA-24-1553-01A
0 years, female, white, stage:Stage IIIB, dead, 1767 days
968.9
TCGA-24-1843-01A
0 years, female, white, stage:Stage IIIC, alive, 106 days
967.6
TCGA-59-2354-01A
0 years, female, white, stage:Stage IIIC, dead, 1046 days
967.1
TCGA-25-1329-01A
0 years, female, white, stage:Stage IIIC, dead, 457 days
960.4
TCGA-24-0966-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 232 days
956.3
TCGA-13-0885-01A
0 years, female, white, stage:Stage IIIC, alive, 3388 days
949.5
TCGA-25-2393-01A
0 years, female, white, stage:Stage IIIC, dead, 1157 days
949.1
TCGA-23-1024-01A
0 years, female, white, stage:Stage IV, alive, 468 days
945.5
TCGA-24-0979-01A
0 years, female, white, stage:Stage IV, dead, 1264 days
941.6
TCGA-61-1998-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
932.3
TCGA-13-1404-01A
0 years, female, white, stage:Stage IIIC, alive, 2469 days
932.1
TCGA-29-2414-01A
0 years, female, white, stage:Stage IIIC, dead, 2621 days
929.7
TCGA-61-2104-01A
0 years, female, white, stage:Stage IIC, alive, 2338 days
925.9
TCGA-25-1633-01A
0 years, female, white, stage:Stage IIIC, dead, 1891 days
920.8
TCGA-61-2109-01A
0 years, female, white, stage:Stage IIIC, dead, 629 days
919.7
TCGA-25-1623-01A
0 years, female, white, stage:Stage IV, dead, 565 days
917.9
TCGA-24-1467-01A
0 years, female, white, stage:Stage IIIC, dead, 3224 days
914.2
TCGA-23-1107-01A
0 years, female, white, stage:Stage IV, dead, 9 days
913.9
TCGA-13-1405-01A
0 years, female, white, stage:Stage IV, dead, 868 days
905.7
TCGA-29-1701-01A
0 years, female, white, stage:Stage IIIC, dead, 515 days
901.9
TCGA-24-1474-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 676 days
898.4
TCGA-25-2042-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 396 days
893.4
TCGA-24-1464-01A
0 years, female, white, stage:Stage IIIC, dead, 379 days
888.0
TCGA-13-0923-01A
0 years, female, white, stage:Stage IIIC, alive, 2547 days
877.0
TCGA-29-2427-01A
0 years, female, white, stage:Stage IIIC, alive, 1900 days
875.6
TCGA-30-1718-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
875.4
TCGA-25-2392-01A
0 years, female, white, stage:Stage IV, dead, 31 days
875.0
TCGA-29-1711-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 1053 days
872.4
TCGA-13-1507-01A
0 years, female, white, stage:Stage IIIC, dead, 1993 days
870.3
TCGA-61-2003-01A
0 years, female, white, stage:Stage IIIC, alive, 122 days
862.3
TCGA-13-1487-01A
0 years, female, white, stage:Stage IV, dead, 681 days
860.3
TCGA-13-0766-01A
0 years, female, white, stage:Stage IIIC, dead, 1725 days
853.2
TCGA-23-1028-01A
0 years, female, white, stage:Stage IIIC, alive, 1503 days
850.0
TCGA-25-2396-01A
0 years, female, white, stage:Stage IIIC, dead, 92 days
844.7
TCGA-24-1928-01A
0 years, female, white, stage:Stage IIIC, dead, 336 days
831.0
TCGA-24-2297-01A
0 years, female, white, stage:Stage IIIC, dead, 1699 days
818.0
TCGA-13-2060-01A
0 years, female, white, stage:Stage IV, alive, 2369 days
810.8
TCGA-59-2350-01A
0 years, female, stage:Stage IV, dead, 679 days
810.3
TCGA-25-1319-01A
0 years, female, white, stage:Stage IIIC, dead, 1977 days
803.6
TCGA-29-1776-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 360 days
803.6
TCGA-36-1570-01A
0 years, female, white, stage:Stage IIIC, alive, 655 days
786.4
TCGA-24-1430-01A
0 years, female, white, stage:Stage IIIC, dead, 863 days
778.3
TCGA-24-0982-01A
0 years, female, white, stage:Stage IIIC, dead, 679 days
770.8
TCGA-13-1510-01A
0 years, female, white, stage:Stage IIIC, dead, 1359 days
768.9
TCGA-VG-A8LO-01A
0 years, female, black or african american, stage:Stage IV, dead, 24 days
768.7
TCGA-25-1870-01A
0 years, female, white, stage:Stage IIIC, dead, 455 days
767.9
TCGA-25-1326-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
762.6
TCGA-24-2254-01A
0 years, female, white, stage:Stage IIIC, dead, 1736 days
761.4
TCGA-61-2002-01A
0 years, female, white, stage:Stage IIIC, alive, 547 days
755.3
TCGA-61-1733-01A
0 years, female, white, stage:Stage IIIC, alive, 967 days
753.2
TCGA-13-0924-01A
0 years, female, white, stage:Stage IV, alive, 2614 days
751.0
TCGA-29-1778-01A
0 years, female, white, stage:Stage IIIC, alive, 454 days
737.3
TCGA-24-1546-01A
0 years, female, white, stage:Stage IIIC, dead, 1955 days
735.8
TCGA-24-1558-01A
0 years, female, white, stage:Stage IIIC, dead, 594 days
734.2
TCGA-24-1930-01A
0 years, female, white, stage:Stage IIIC, dead, 2467 days
718.5
TCGA-29-1703-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1815 days
713.6
TCGA-61-1910-01A
0 years, female, white, stage:Stage IIC, alive, 1127 days
713.3
TCGA-25-2399-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
707.0
TCGA-31-1946-01A
0 years, female, stage:Stage IIIC, alive, 918 days
705.3
TCGA-61-1737-01A
0 years, female, white, stage:Stage IV, alive, 1364 days
698.5
TCGA-24-1923-01A
0 years, female, white, stage:Stage IIIC, dead, 690 days
686.4
TCGA-25-1631-01A
0 years, female, white, stage:Stage IIIC, dead, 9 days
684.0
TCGA-31-1959-01A
0 years, female, white, stage:Stage IV, alive, 67 days
682.6
TCGA-23-2084-01A
0 years, female, white, stage:Stage IV, dead, 1516 days
676.7
TCGA-61-1721-01A
0 years, female, white, stage:Stage IV, alive, 338 days
665.9
TCGA-24-1550-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
663.4
TCGA-24-1924-01A
0 years, female, white, stage:Stage IIIC, dead, 919 days
657.5
TCGA-04-1347-01A
0 years, female, white, stage:Stage IV, alive, 1919 days
657.4
TCGA-24-1105-01A
0 years, female, white, stage:Stage IIIC, dead, 1442 days
654.1
TCGA-61-2000-01A
0 years, female, white, stage:Stage IIIC, alive, 441 days
652.3
TCGA-24-1425-01A
0 years, female, white, stage:Stage IIIC, alive, 181 days
646.2
TCGA-13-0804-01A
0 years, female, white, stage:Stage IIIC, dead, 1073 days
627.4
TCGA-13-0886-01A
0 years, female, white, stage:Stage IIIC, alive, 4665 days
626.0
TCGA-09-1673-01A
0 years, female, white, stage:Stage IV, alive, 92 days
621.0
TCGA-29-1770-01A
0 years, female, white, stage:Stage IIIC, alive, 741 days
609.4
TCGA-61-1900-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 176 days
603.7
TCGA-13-0720-01A
0 years, female, white, stage:Stage IIIC, dead, 1355 days
602.5
TCGA-24-1846-01A
0 years, female, stage:Stage IIIC, alive, 133 days
600.2
TCGA-61-1914-01A
0 years, female, stage:Stage IIIC, alive, 1722 days
585.1
TCGA-30-1861-01A
0 years, female, white, stage:Stage IIIC, dead, 1058 days
574.9
TCGA-04-1338-01A
0 years, female, white, stage:Stage IIIC, alive, 1418 days
567.8
TCGA-13-1411-01A
0 years, female, white, stage:Stage IIIC, dead, 531 days
565.6
TCGA-61-1724-01A
0 years, female, white, stage:Stage IIIC, dead, 637 days
563.7
TCGA-36-1568-01A
0 years, female, stage:Stage IIIC, alive, 875 days
560.8
TCGA-24-1552-01A
0 years, female, white, stage:Stage IIIC, dead, 1259 days
559.4
TCGA-29-1705-01A
0 years, female, white, stage:Stage IIIC, dead, 555 days
550.7
TCGA-13-1498-01A
0 years, female, white, stage:Stage IIIC, dead, 2012 days
544.5
TCGA-31-1956-01A
0 years, female, white, stage:Stage IIIB, alive, 1342 days
536.4
TCGA-25-2409-01A
0 years, female, white, stage:Stage IV, dead, 821 days
527.1
TCGA-29-1761-01A
0 years, female, asian, stage:Stage IIIC, dead, 528 days
519.3
TCGA-13-1403-01A
0 years, female, white, stage:Stage IIIC, dead, 2345 days
516.9
TCGA-24-1563-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1451 days
504.0
TCGA-30-1857-01A
0 years, female, white, stage:Stage IV, dead, 8 days
503.1
TCGA-30-1853-01A
0 years, female, white, stage:Stage IIIC, dead, 1103 days
502.2
TCGA-59-2348-01A
0 years, female, white, stage:Stage IIIC, alive, 5481 days
494.9
TCGA-25-1328-01A
0 years, female, white, stage:Stage IIIC, dead, 2009 days
491.7
TCGA-36-1577-01A
0 years, female, asian, stage:Stage IIC, alive, 783 days
479.9
TCGA-24-1560-01A
0 years, female, white, stage:Stage IIIC, dead, 1341 days
473.3
TCGA-24-2289-01A
0 years, female, white, stage:Stage IV, dead, 2049 days
470.8
TCGA-57-1584-01A
0 years, female, white, stage:Stage IIIC, alive, 643 days
463.5
TCGA-29-1783-01A
0 years, female, white, stage:Stage IIIC, alive, 220 days
462.5
TCGA-61-1918-01A
0 years, female, white, stage:Stage IV, dead, 479 days
450.0
TCGA-29-1710-01A
0 years, female, white, stage:Stage IIIC, dead, 951 days
444.2
TCGA-31-1953-01A
0 years, female, asian, stage:Stage IIIC, alive, 204 days
441.2
TCGA-24-1427-01A
0 years, female, stage:Stage IIIC, alive, 147 days
431.8
TCGA-31-1951-01A
0 years, female, white, stage:Stage IIIC, alive, 684 days
426.9
TCGA-29-1688-01A
0 years, female, white, stage:Stage IIIC, dead, 2400 days
426.1
TCGA-30-1862-01A
0 years, female, white, stage:Stage IV, dead, 186 days
407.1
TCGA-61-2008-01A
0 years, female, asian, stage:Stage IIC, alive, 932 days
396.2
TCGA-25-1317-01A
0 years, female, white, stage:Stage IIIC, dead, 61 days
395.1
TCGA-20-1686-01A
0 years, female, white, stage:Stage IIIC, alive, 89 days
390.2
TCGA-61-1995-01A
0 years, female, white, stage:Stage IIIC, alive, 61 days
386.6
TCGA-13-1485-01A
0 years, female, white, stage:Stage IV, dead, 629 days
383.5
TCGA-24-1417-01A
0 years, female, white, stage:Stage IV, alive, 238 days
367.2
TCGA-23-2078-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
367.1
TCGA-23-1113-01A
0 years, female, white, stage:Stage IV, dead, 949 days
366.6
TCGA-25-2400-01A
0 years, female, white, stage:Stage IIIC, dead, 1278 days
366.1
TCGA-13-0897-01A
0 years, female, white, stage:Stage IIIC, dead, 2182 days
362.4
TCGA-24-2280-01A
0 years, female, white, stage:Stage IIIC, alive, 2143 days
354.8
TCGA-24-1842-01A
0 years, female, white, stage:Stage IIIC, alive, 253 days
351.1
TCGA-29-1694-01A
0 years, female, white, stage:Stage IIIC, dead, 1187 days
346.1
TCGA-24-2261-01A
0 years, female, white, stage:Stage IIIC, dead, 24 days
341.9
TCGA-09-2045-01A
0 years, female, asian, stage:Stage IV, dead, 1069 days
340.2
TCGA-09-1670-01A
0 years, female, white, stage:Stage IIIA, alive, 547 days
330.0
TCGA-09-0367-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IIIC, dead, 547 days
323.3
TCGA-59-2355-01A
0 years, female, white, stage:Stage IV, dead, 65 days
319.7
TCGA-13-1408-01A
0 years, female, white, stage:Stage IIIC, dead, 1680 days
315.6
TCGA-13-0765-01A
0 years, female, white, stage:Stage IIIC, dead, 1389 days
307.3
TCGA-24-1422-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 23 days
299.6
TCGA-24-1616-01A
0 years, female, white, stage:Stage IIIC, dead, 1163 days
298.9
TCGA-61-1725-01A
0 years, female, white, stage:Stage IIIC, alive, 956 days
294.4
TCGA-29-1768-01A
0 years, female, white, stage:Stage IV, dead, 952 days
293.4
TCGA-24-1604-01A
0 years, female, white, stage:Stage IIIC, dead, 2688 days
292.4
TCGA-13-0883-01A
0 years, female, white, stage:Stage IIIC, dead, 2097 days
292.2
TCGA-13-0726-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
288.9
TCGA-30-1714-01A
0 years, female, white, stage:Stage IV, dead, 1158 days
284.5
TCGA-13-0768-01A
0 years, female, white, stage:Stage IIIC, dead, 1784 days
281.7
TCGA-24-2288-01A
0 years, female, white, stage:Stage IIIC, dead, 25 days
278.0
TCGA-24-2298-01A
0 years, female, white, stage:Stage IIIC, dead, 1620 days
253.8
TCGA-57-1585-01A
0 years, female, white, stage:Stage IIIC, dead, 53 days
253.5
TCGA-24-2267-01A
0 years, female, white, stage:Stage IIB, dead, 1446 days
247.5
TCGA-24-1562-01A
0 years, female, white, stage:Stage IIIC, dead, 1384 days
241.8
TCGA-36-1569-01A
0 years, female, white, stage:Stage IIIC, alive, 885 days
239.2
TCGA-36-1580-01A
0 years, female, stage:Stage IIIC, dead, 737 days
237.1
TCGA-29-1781-01A
0 years, female, white, stage:Stage IIIC, alive, 255 days
234.6
TCGA-30-1891-01A
0 years, female, white, stage:Stage IIIC, dead, 914 days
214.8
TCGA-25-1318-01A
0 years, female, white, stage:Stage IIIC, dead, 1064 days
212.1
TCGA-24-1845-01A
0 years, female, white, stage:Stage IIIC, alive, 116 days
209.9
TCGA-57-1583-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 346 days
196.8
TCGA-29-1777-01A
0 years, female, white, stage:Stage IIIC, alive, 374 days
194.1
TCGA-20-1687-01A
0 years, female, white, stage:Stage IV, alive, 81 days
170.0
TCGA-24-2038-01A
0 years, female, white, stage:Stage IIIA, dead, 1354 days
163.3
TCGA-20-1683-01A
0 years, female, white, stage:Stage IIIC, alive, 772 days
161.3
TCGA-61-2110-01A
0 years, female, white, stage:Stage IIIC, dead, 1354 days
158.1
TCGA-29-1693-01A
0 years, female, white, stage:Stage IIIC, alive, 3096 days
154.6
TCGA-13-1409-01A
0 years, female, white, stage:Stage IIIC, dead, 1742 days
143.2
TCGA-13-1511-01A
0 years, female, asian, stage:Stage IV, dead, 1650 days
133.1
TCGA-24-1471-01A
0 years, female, white, stage:Stage IIIC, alive, 36 days
120.4
TCGA-24-2023-01A
0 years, female, white, stage:Stage IIIA, dead, 1364 days
112.5
TCGA-24-2026-01A
0 years, female, white, stage:Stage IIIC, dead, 1059 days
111.8
TCGA-30-1892-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
91.3
TCGA-24-2271-01A
0 years, female, asian, stage:Stage IIIC, dead, 962 days
88.7
TCGA-23-1118-01A
0 years, female, white, stage:Stage IIIC, alive, 2616 days
85.8
TCGA-24-1431-01A
0 years, female, white, stage:Stage IIIC, dead, 583 days
85.0
TCGA-09-1662-01A
0 years, female, white, stage:Stage IV, dead, 2717 days
68.1
TCGA-61-2092-01A
0 years, female, white, stage:Stage IIIC, alive, 1573 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MDK is not prognostic in Ovary Serous Cystadenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
757.5
Number of samples
81
Samples
Sample
Description
TPM
DO46586
0 years, female, NA, stage:III, dead, 1019 days
3333.4
DO46453
0 years, female, NA, stage:III, dead, 3294 days
2594.0
DO46356
0 years, female, NA, stage:III, dead, 911 days
2012.5
DO46513
0 years, female, NA, stage:IV, dead, 1883 days
2006.8
DO46380
0 years, female, NA, stage:III, dead, 1423 days
1973.6
DO46366
0 years, female, NA, stage:III, dead, 2054 days
1955.3
DO46360
0 years, female, NA, stage:IV, dead, 1759 days
1893.4
DO46333
0 years, female, NA, stage:III, dead, 359 days
1853.7
DO46362
0 years, female, NA, stage:III, dead, 1639 days
1716.9
DO46576
0 years, female, NA, stage:III, alive, 133 days
1701.9
DO46463
0 years, female, NA, stage:III, dead, 2451 days
1585.5
DO46372
0 years, female, NA, stage:III, dead, 1326 days
1485.7
DO46443
0 years, female, NA, stage:III, dead, 2464 days
1453.6
DO46538
0 years, female, NA, stage:III, dead, 1527 days
1407.8
DO46394
0 years, female, NA, stage:IV, dead, 1039 days
1277.2
DO46588
0 years, female, NA, stage:III, dead, 438 days
1265.0
DO46352
0 years, female, NA, stage:III, dead, 677 days
1247.7
DO46560
0 years, female, NA, stage:IV, dead, 286 days
1214.1
DO46591
0 years, female, NA, stage:III, dead, 195 days
1188.9
DO46493
0 years, female, NA, stage:IV, alive, 839 days
1175.9
DO46581
0 years, female, NA, stage:III, dead, 408 days
1124.7
DO46458
0 years, female, NA, stage:IV, alive, 3787 days
1018.3
DO46436
0 years, female, NA, stage:III, alive, 3193 days
987.1
DO46329
0 years, female, NA, stage:III, dead, 1699 days
964.5
DO46396
0 years, female, NA, stage:III, dead, 583 days
919.5
DO46551
0 years, female, NA, stage:III, dead, 1055 days
834.0
DO46332
0 years, female, NA, stage:III, dead, 689 days
813.4
DO46342
0 years, female, NA, stage:III, dead, 1398 days
802.5
DO46438
0 years, female, NA, stage:IV, alive, 2227 days
786.2
DO46388
0 years, female, NA, stage:III, dead, 413 days
754.4
DO46368
0 years, female, NA, stage:III, dead, 2879 days
751.0
DO46561
0 years, female, NA, stage:III, dead, 195 days
750.0
DO46328
0 years, female, NA, stage:III, dead, 972 days
748.8
DO46611
0 years, female, NA, stage:III, dead, 734 days
740.6
DO46330
0 years, female, NA, stage:III, dead, 684 days
681.0
DO46344
0 years, female, NA, stage:III, dead, 642 days
672.1
DO46468
0 years, female, NA, stage:III, alive, 2776 days
667.8
DO46533
0 years, female, NA, stage:III, alive, 3667 days
630.6
DO46340
0 years, female, NA, stage:III, dead, 616 days
609.6
DO46566
0 years, female, NA, stage:III, dead, 673 days
573.5
DO46378
0 years, female, NA, stage:III, alive, 843 days
534.6
DO46404
0 years, female, NA, stage:III, dead, 690 days
534.0
DO46325
0 years, female, NA, stage:III, dead, 477 days
509.3
DO46370
0 years, female, NA, stage:III, dead, 1727 days
509.3
DO46398
0 years, female, NA, stage:III, alive, 437 days
461.5
DO46448
0 years, female, NA, stage:III, dead, 654 days
449.5
DO46546
0 years, female, NA, stage:III, dead, 1889 days
419.5
DO46346
0 years, female, NA, stage:III, dead, 1187 days
415.5
DO46376
0 years, female, NA, stage:III, dead, 1430 days
406.3
DO46336
0 years, female, NA, stage:IV, dead, 664 days
366.8
DO46386
0 years, female, NA, stage:III, dead, 1162 days
366.2
DO46348
0 years, female, NA, stage:IV, dead, 287 days
359.8
DO46571
0 years, female, NA, stage:III, dead, 243 days
351.3
DO46528
0 years, female, NA, stage:III, alive, 6139 days
347.5
DO46382
0 years, female, NA, stage:IV, dead, 311 days
312.5
DO46338
0 years, female, NA, stage:III, dead, 596 days
308.0
DO46523
0 years, female, NA, stage:IV, alive, 1873 days
307.8
DO46597
0 years, female, NA, stage:III, dead, 393 days
275.0
DO46602
0 years, female, NA, stage:III, dead, 205 days
274.6
DO46412
0 years, female, NA, stage:III, dead, 597 days
272.9
DO46508
0 years, female, NA, stage:III, dead, 2101 days
264.9
DO46374
0 years, female, NA, stage:III, dead, 1409 days
262.0
DO46364
0 years, female, NA, stage:III, dead, 806 days
249.0
DO46390
0 years, female, NA, stage:III, dead, 374 days
238.6
DO46568
0 years, female, NA, stage:III, dead, 320 days
230.6
DO46518
0 years, female, NA, stage:III, alive, 2960 days
227.4
DO46402
0 years, female, NA, stage:III, dead, 511 days
220.3
DO46358
0 years, female, NA, stage:III, dead, 423 days
217.6
DO46334
0 years, female, NA, stage:III, dead, 496 days
179.3
DO46354
0 years, female, NA, stage:III, dead, 843 days
159.5
DO46326
0 years, female, NA, stage:III, dead, 701 days
150.3
DO46428
0 years, female, NA, stage:IV, alive, 2644 days
144.0
DO46392
0 years, female, NA, stage:III, dead, 628 days
139.7
DO46350
0 years, female, NA, stage:III, dead, 886 days
126.7
DO46432
0 years, female, NA, stage:III, alive, 2218 days
103.9
DO46331
0 years, female, NA, stage:III, dead, 612 days
102.8
DO46408
0 years, female, NA, stage:III, dead, 489 days
100.8
DO46327
0 years, female, NA, stage:III, dead, 184 days
95.1
DO46606
0 years, female, NA, stage:III, alive, 804 days
82.3
DO46400
0 years, female, NA, stage:III, dead, 719 days
81.7
DO46384
0 years, female, NA, stage:III, dead, 614 days
33.2
Show allShow less
OVARY SEROUS CYSTADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
108
Samples
Sample ID
Sample type
nRPX
d38f40fb-dd78-43b2-8b7b-4b6977_D2
Tumor
2.6
3dcf8b3c-c0c5-4dfa-9543-5d30fb_D2
Tumor
2.5
2433b136-fc7b-4cea-b958-bc6efb_D2
Tumor
2.1
4ccb249a-6722-491e-97e9-e3b4e7_D2
Tumor
2.0
ce1e5dfc-2ef1-4633-af93-5ea4d9_D2
Tumor
1.8
91b287fd-eadb-442d-abcd-20b741_D2
Tumor
1.8
558333b0-ea23-4303-9e3c-4932b1_D2
Tumor
1.7
627e6e36-3dca-4ee5-9755-6f3510_D2
Tumor
1.6
092af714-b97a-457c-b0e9-8c20e8_D2
Normal
1.5
2ed8beb2-bc63-4bad-b5fe-1916a0_D2
Tumor
1.4
0c87932d-b6fd-4eb5-b86a-a34d07_D2
Tumor
1.4
285fed94-1495-448e-879b-b55de9_D2
Tumor
1.4
62f5840e-6cd7-4200-b651-645e53_D2
Tumor
1.4
15524912-685a-47ce-a824-567848_D2
Tumor
1.2
d109a3c0-350e-47f5-bda0-61899c_D2
Tumor
1.2
7d953d1d-84b6-4ecd-b1d7-1ed865_D2
Tumor
1.1
9c8e78bf-b03e-4ba0-9909-5ff070_D2
Tumor
1.1
1b2ab076-c72f-4bbe-b9f9-657d24_D2
Tumor
1.1
2b4ce90c-8036-4207-ac3e-54a76f_D2
Tumor
1.1
1de8d3d8-fc0e-4be0-8aa7-127c7b_D2
Tumor
1.0
1556af7e-c2ae-4fce-9aae-87c459_D1_D2
Normal
1.0
7c7ce2d7-6c8a-424e-8e6c-d14ad1_D2
Tumor
0.9
28d0abdb-f682-4bd3-9425-a9c508_D2
Tumor
0.9
3a380577-c134-47ba-a1ce-988d7c_D2
Tumor
0.9
76e77c6b-c80e-4391-bdbb-e1dcea_D2
Tumor
0.9
2563cb02-d58a-4286-8634-7502cd_D2
Tumor
0.9
2f901c90-617e-46da-9fac-d68369_D2
Tumor
0.8
fbb41c94-aabd-49cc-90b2-882c3e_D2
Tumor
0.8
a03d1103-b809-42c4-ad5c-5aff58_D2
Tumor
0.8
6530147a-efe9-4df6-ac2f-03ece3_D2
Tumor
0.7
5c3971ee-87c7-4dff-b66e-f18892_D2
Tumor
0.7
2b73e01c-347a-4dae-a71d-752aeb_D2
Normal
0.7
8234f8ea-bdbd-45b0-bd0b-16f1e7_D2
Tumor
0.7
256ac9f5-1e19-44b4-92fb-fef3fc_D2
Tumor
0.5
e9d416e7-f661-400a-896e-388545_D2
Tumor
0.5
340a3769-3031-41ae-bb08-a2f696_D2
Normal
0.5
10c2d629-0287-4511-ac25-f29031_D2
Tumor
0.5
0cc794c3-5bf5-4621-b238-58a0f6_D2
Tumor
0.5
51c1c79e-5a8e-4b0a-bf92-1c0cab_D2
Tumor
0.4
1a10c200-3895-4648-b951-94f99f_D2
Tumor
0.4
9e0d47e0-f633-468b-b82b-4d752d_D2
Tumor
0.4
6319b36b-533c-4e86-8e12-80552e_D3
Tumor
0.4
d4791079-c826-4fc7-9d9b-ee20ba_D2
Tumor
0.4
e7b656bf-3c34-4ba1-bdf3-c7eefe_D2
Tumor
0.4
2224c03f-b7b1-4368-887e-2b4cdf_D2
Tumor
0.4
9b90eb78-2f50-4aeb-b010-d642f9_D2
Tumor
0.3
3490835c-c004-45ed-91f3-7c206f_D2
Tumor
0.3
7069e990-4a4e-4984-a66d-4d835a_D2
Tumor
0.3
79b60f32-6cca-4cb6-9a1e-22a3ac_D2
Tumor
0.2
69d552be-7cb2-4bb4-b602-a27b3e_D2
Tumor
0.2
2115808b-6a0d-49bc-a8d7-b83bde_D2
Tumor
0.2
efc971f8-54c5-4531-a792-705ecf_D2
Tumor
0.2
9a7a86d3-bbf2-4d36-941d-c75c03_D1_D2
Tumor
0.1
c17b0ff9-9057-4848-a0cc-abb25f_D2
Tumor
0.1
7edfd606-4bee-4529-9fec-1ca7f0_D2
Normal
0.1
35a345a4-e954-4c81-ae3f-7797cd_D2
Tumor
0.1
46c73531-f531-4ec3-97fe-b39d9d_D2
Tumor
0.1
42d860a3-8a0c-4c44-a09a-9ad8cf_D2
Tumor
0.0
27f3ca2d-a86f-479d-8e7e-5307c7_D2
Tumor
0.0
41d0619e-b299-42e2-ac32-29e784_D2
Tumor
0.0
927f0958-db5a-4bc5-92b7-2a3695_D2
Tumor
0.0
347e379b-77c0-4dd3-aa25-18c9d1_D2
Tumor
0.0
3d3e1888-d67e-4c69-ba83-112d0f_D2
Tumor
0.0
318d53c3-216b-4de1-a098-77d6dd_D2
Tumor
-0.1
eb0a53df-7620-4024-8d2d-051142_D2
Tumor
-0.2
52c064a7-78d9-4a1a-85b4-27c6d1_D2
Tumor
-0.2
5ea22f5e-307b-491d-801f-8b7fa6_D2
Tumor
-0.2
fe83e13f-9754-403b-8f74-d6caf8_D2
Tumor
-0.3
31c15e30-21d4-4843-bd4a-9cd0d8_D2
Normal
-0.3
b9c1f22e-61f7-45ed-b3b4-5094c7_D2
Normal
-0.3
49bd51fe-48a1-4828-b66e-b30c38_D2
Tumor
-0.3
1c9145ad-1981-4871-aa7e-8b11de_D2
Tumor
-0.4
3fbf076a-824b-4eac-b6dc-bf5e59_D2
Normal
-0.4
f6c215ea-5381-4521-bb61-be8e97_D2
Tumor
-0.4
61f76fe6-a1c6-41b8-bdc2-2f9209_D2
Normal
-0.4
2dc28da8-7ff1-4b9b-b5bd-17cc25_D2
Tumor
-0.5
6e209757-a7f4-45af-b5f3-2ebc02_D2
Normal
-0.5
51a4ce2f-4166-4c6b-a7e0-942d0a_D2
Tumor
-0.5
cfd76f9a-ce60-4ec7-8e6b-a8fc31_D3
Tumor
-0.5
8d78194e-fbef-4819-a7b5-b73ae9_D2
Tumor
-0.6
1772e913-f62e-446a-8cf3-720348_D2
Tumor
-0.6
3946a96c-e0ae-442f-83b4-a9350e_D2
Tumor
-0.6
50997c44-1c8b-4d34-b535-4a6cc2_D2
Tumor
-0.6
05387aad-2a1f-42c2-8d6f-950598_D3
Tumor
-0.6
eb3f3494-7057-4afe-b212-e6e9a3_D2
Tumor
-0.6
e3ebe010-cd31-4b5d-8fcb-b7103b_D2
Tumor
-0.7
161317f3-1a39-438e-af45-cd2502_D2
Tumor
-0.7
a8853382-b726-4ce8-98d5-ca89df_D2
Tumor
-0.7
8e17b45e-6a06-4e4e-913d-7b1edb_D2
Tumor
-0.8
af95e2c6-25c4-4ab8-bf06-3e15ff_D2
Tumor
-0.8
3e746bea-ed68-40e6-b348-6ddf08_D2
Normal
-0.9
a583d3ff-8165-43e9-b764-23b7ef_D1_D2
Normal
-0.9
1abbcb28-f221-4cd4-8c01-37b9bb_D1_D2
Normal
-0.9
994f9b8e-46cb-413f-8ec8-2c2fed_D2
Normal
-0.9
bd266bdd-12e4-42cb-9c49-911bfc_D2
Tumor
-0.9
685ec3c2-e67a-40d3-9eb3-aa01c9_D1_D2
Normal
-1.0
74a45e5a-a35a-4c60-a4b4-f3f5ea_D2
Tumor
-1.1
80873a0c-1f40-4d51-bab1-3f2071_D2
Tumor
-1.1
b22659b9-e12c-4725-a7db-a833de_D1_D2
Normal
-1.2
0745488e-0bfb-4d1f-8228-dedf76_D1_D2
Normal
-1.2
a65d8e76-640f-4341-a561-afbb57_D2
Normal
-1.3
08296da7-70ea-44df-8646-09f2cc_D2
Tumor
-1.3
a3a26070-fb84-406a-8280-d555e6_D2
Normal
-1.4
8ed739dd-ae0f-4881-971a-db3cf4_D1_D2
Normal
-1.4
e6850782-fd2a-4c53-b682-1852fe_D2
Tumor
-1.5
e23eb014-69c1-460a-b9d4-9786c8_D2
Normal
-1.6
21efd60f-6a31-4b98-9477-16a905_D2
Normal
-1.6
1db5574d-aca7-403c-8100-6e705f_D2
Normal
-1.7
Show allShow less
OVARIAN CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
