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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MDK is not prognostic in Cervical Squamous Cell Carcinoma and Endocervical Adenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
603.3
Number of samples
283
Samples
Sample
Description
TPM
TCGA-VS-A8EJ-01A
0 years, female, white, stage:Stage IIB, dead, 607 days
4802.6
TCGA-EA-A556-01A
0 years, female, white, stage:Stage IB, alive, 453 days
2664.9
TCGA-VS-A8Q9-01A
0 years, female, white, stage:Stage IB, alive, 1630 days
2256.4
TCGA-PN-A8MA-01A
0 years, female, black or african american, stage:Stage IIB, alive, 90 days
2232.9
TCGA-Q1-A73R-01A
0 years, female, white, stage:Stage I, alive, 567 days
2122.0
TCGA-VS-A8QA-01A
0 years, female, stage:Stage IB, alive, 1099 days
2096.6
TCGA-EA-A4BA-01A
0 years, female, white, stage:Stage IB, alive, 755 days
2024.1
TCGA-IR-A3LA-01A
0 years, female, white, stage:Stage IB, alive, 4172 days
2008.9
TCGA-EA-A78R-01A
0 years, female, asian, stage:Stage IB, alive, 410 days
1901.5
TCGA-C5-A8YT-01A
0 years, female, white, stage:Stage IB, dead, 633 days
1804.7
TCGA-VS-A9UP-01A
0 years, female, stage:Stage IIA, alive, 1444 days
1686.4
TCGA-EA-A5ZE-01A
0 years, female, asian, stage:Stage IB, alive, 829 days
1647.0
TCGA-EA-A5ZF-01A
0 years, female, asian, stage:Stage IB, alive, 828 days
1544.8
TCGA-VS-A94X-01A
0 years, female, black or african american, stage:Stage IIB, dead, 506 days
1527.3
TCGA-EA-A3Y4-01A
0 years, female, white, stage:Stage IB, alive, 1122 days
1505.9
TCGA-MA-AA3Z-01A
0 years, female, white, stage:Stage IB, alive, 595 days
1448.9
TCGA-DS-A1O9-01A
0 years, female, white, stage:Stage IVA, dead, 266 days
1434.1
TCGA-DG-A2KJ-01A
0 years, female, stage:Stage IIIB, alive, 2893 days
1400.5
TCGA-MU-A51Y-01A
0 years, female, white, stage:Stage IIA, alive, 854 days
1393.1
TCGA-LP-A7HU-01A
0 years, female, asian, stage:Stage II, alive, 406 days
1377.4
TCGA-JX-A3Q8-01A
0 years, female, asian, stage:Stage IB, alive, 1357 days
1361.1
TCGA-BI-A20A-01A
0 years, female, white, stage:Stage IB, alive, 720 days
1346.4
TCGA-HM-A6W2-01A
0 years, female, black or african american, stage:Stage IVB, alive, 287 days
1324.1
TCGA-EX-A69L-01A
0 years, female, asian, stage:Stage IB, alive, 602 days
1312.0
TCGA-EX-A69M-01A
0 years, female, white, stage:Stage IB, dead, 253 days
1305.8
TCGA-EA-A6QX-01A
0 years, female, asian, stage:Stage IIIB, alive, 730 days
1297.3
TCGA-C5-A1MF-01A
0 years, female, white, stage:Stage IB, alive, 1617 days
1297.1
TCGA-VS-A9V3-01A
0 years, female, white, stage:Stage IVB, alive, 540 days
1287.5
TCGA-VS-A9UZ-01A
0 years, female, white, stage:Stage IB, alive, 2044 days
1267.7
TCGA-JX-A3PZ-01A
0 years, female, white, stage:Stage IB, dead, 642 days
1244.6
TCGA-Q1-A73S-01A
0 years, female, white, stage:Stage IB, alive, 688 days
1227.9
TCGA-EK-A2RM-01A
0 years, female, white, stage:Stage IB, alive, 50 days
1213.5
TCGA-VS-A9V1-01A
0 years, female, white, stage:Stage IVB, dead, 157 days
1213.4
TCGA-Q1-A5R1-01A
0 years, female, white, stage:Stage IB, alive, 474 days
1203.7
TCGA-VS-A94W-01A
0 years, female, white, stage:Stage IIB, alive, 1243 days
1168.0
TCGA-MY-A5BD-01A
0 years, female, white, stage:Stage IIB, alive, 1667 days
1164.3
TCGA-JW-A852-01A
0 years, female, white, stage:Stage IIB, dead, 252 days
1153.7
TCGA-DG-A2KK-01A
0 years, female, stage:Stage IIIB, alive, 2496 days
1146.9
TCGA-UC-A7PI-01A
0 years, female, white, stage:Stage IB, alive, 2114 days
1088.3
TCGA-C5-A2LS-01A
0 years, female, white, stage:Stage IB, alive, 1345 days
1085.2
TCGA-Q1-A5R3-01A
0 years, female, white, stage:'--, alive, 485 days
1079.7
TCGA-C5-A1ML-01A
0 years, female, white, stage:Stage IB, dead, 636 days
1067.8
TCGA-EA-A3HQ-01A
0 years, female, white, stage:Stage II, alive, 1136 days
1066.2
TCGA-EA-A43B-01A
0 years, female, white, stage:Stage IB, alive, 791 days
1061.5
TCGA-VS-A9UT-01A
0 years, female, asian, stage:Stage IB, alive, 482 days
1052.5
TCGA-VS-A8Q8-01A
0 years, female, white, stage:Stage IB, dead, 978 days
1052.0
TCGA-EA-A3HT-01A
0 years, female, white, stage:Stage IB, alive, 954 days
1047.0
TCGA-EK-A2GZ-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 383 days
1043.8
TCGA-EK-A2R8-01A
0 years, female, white, stage:Stage IB, alive, 44 days
1036.7
TCGA-EK-A2PI-01A
0 years, female, white, stage:Stage IIIB, alive, 586 days
1023.1
TCGA-C5-A1MI-01A
0 years, female, white, stage:Stage IB, dead, 1083 days
1010.6
TCGA-4J-AA1J-01A
0 years, female, white, stage:Stage IB, alive, 542 days
999.8
TCGA-DS-A0VK-01A
0 years, female, white, stage:Stage IB, dead, 1118 days
969.7
TCGA-C5-A2LZ-01A
0 years, female, white, stage:Stage IIIB, dead, 3046 days
951.0
TCGA-VS-A9UL-01A
0 years, female, white, stage:Stage IIIB, dead, 442 days
941.4
TCGA-JW-A69B-01A
0 years, female, white, stage:Stage IB, alive, 863 days
935.6
TCGA-EA-A5FO-01A
0 years, female, white, stage:Stage IB, alive, 815 days
920.5
TCGA-EA-A439-01A
0 years, female, asian, stage:Stage IIA, alive, 965 days
909.9
TCGA-JW-A5VJ-01A
0 years, female, american indian or alaska native, stage:Stage IIB, alive, 652 days
897.8
TCGA-C5-A1MK-01A
0 years, female, white, stage:Stage IIIB, dead, 74 days
885.5
TCGA-VS-A9UD-01A
0 years, female, white, stage:Stage IIIA, alive, 739 days
882.6
TCGA-DS-A7WF-01A
0 years, female, stage:Stage IB, dead, 492 days
878.2
TCGA-C5-A2LX-01A
0 years, female, white, stage:Stage IB, alive, 2526 days
869.4
TCGA-C5-A2LY-01A
0 years, female, white, stage:Stage IB, alive, 2383 days
830.2
TCGA-VS-A9V5-01A
0 years, female, white, stage:Stage IIB, dead, 494 days
826.9
TCGA-MY-A913-01A
0 years, female, black or african american, stage:Stage IIA, alive, 524 days
818.8
TCGA-EK-A2RA-01A
0 years, female, stage:Stage IIA, alive, 1246 days
802.7
TCGA-C5-A1M5-01A
0 years, female, white, stage:Stage IB, dead, 2052 days
802.2
TCGA-HM-A3JK-01A
0 years, female, white, stage:Stage IIA, alive, 632 days
796.4
TCGA-EA-A3HU-01A
0 years, female, white, stage:Stage II, alive, 1013 days
794.2
TCGA-VS-A8EB-01A
0 years, female, white, stage:Stage IIIB, dead, 305 days
788.3
TCGA-EA-A1QS-01A
0 years, female, white, stage:Stage IB, alive, 1203 days
786.3
TCGA-IR-A3L7-01A
0 years, female, white, stage:Stage IB, alive, 4483 days
781.8
TCGA-EX-A449-01A
0 years, female, white, stage:Stage IVB, alive, 447 days
780.3
TCGA-VS-A9V0-01A
0 years, female, stage:Stage IB, alive, 573 days
778.6
TCGA-LP-A4AX-01A
0 years, female, asian, stage:Stage IB, alive, 380 days
775.3
TCGA-RA-A741-01A
0 years, female, white, stage:Stage IIB, alive, 444 days
773.7
TCGA-FU-A23K-01A
0 years, female, white, stage:Stage IIIB, alive, 372 days
772.4
TCGA-DS-A1OC-01A
0 years, female, white, stage:Stage IB, alive, 376 days
771.3
TCGA-C5-A8XH-01A
0 years, female, white, stage:Stage IB, dead, 1394 days
762.5
TCGA-FU-A3EO-01A
0 years, female, white, stage:Stage IIB, alive, 490 days
761.7
TCGA-DS-A1OD-01A
0 years, female, white, stage:Stage IB, alive, 3874 days
761.1
TCGA-DS-A0VM-01A
0 years, female, white, stage:Stage IB, alive, 3589 days
758.6
TCGA-VS-A9UR-01A
0 years, female, white, stage:Stage IIA, alive, 793 days
739.1
TCGA-C5-A3HL-01A
0 years, female, white, stage:Stage IB, alive, 621 days
734.3
TCGA-UC-A7PD-01A
0 years, female, american indian or alaska native, stage:Stage IB, dead, 355 days
734.2
TCGA-IR-A3LI-01A
0 years, female, white, stage:Stage IVB, alive, 2493 days
716.4
TCGA-C5-A1ME-01A
0 years, female, white, stage:Stage IB, alive, 1756 days
713.6
TCGA-DS-A5RQ-01A
0 years, female, white, stage:Stage IB, alive, 512 days
710.8
TCGA-VS-A94Z-01A
0 years, female, white, stage:Stage IIB, alive, 1015 days
697.3
TCGA-IR-A3LF-01A
0 years, female, white, stage:Stage IB, alive, 2949 days
694.7
TCGA-Q1-A73P-01A
0 years, female, white, stage:Stage IB, alive, 483 days
692.7
TCGA-C5-A2M1-01A
0 years, female, white, stage:Stage IB, alive, 1169 days
692.3
TCGA-C5-A1MP-01A
0 years, female, black or african american, stage:Stage IB, alive, 109 days
692.0
TCGA-VS-A8EH-01A
0 years, female, stage:Stage IIIB, alive, 986 days
687.3
TCGA-C5-A7CJ-01A
0 years, female, white, stage:Stage IIA, dead, 3097 days
675.0
TCGA-EK-A2R7-01A
0 years, female, white, stage:Stage IB, alive, 27 days
669.7
TCGA-VS-A8EI-01A
0 years, female, white, stage:Stage IIB, alive, 729 days
658.0
TCGA-C5-A1BM-01A
0 years, female, black or african american, stage:Stage IB, dead, 2520 days
653.9
TCGA-JX-A3Q0-01A
0 years, female, black or african american, stage:Stage III, alive, 6375 days
653.6
TCGA-XS-A8TJ-01A
0 years, female, black or african american, stage:Stage IB, alive, 890 days
653.0
TCGA-DS-A0VL-01A
0 years, female, white, stage:Stage IB, dead, 1692 days
650.3
TCGA-EK-A2RL-01A
0 years, female, black or african american, stage:Stage IB, dead, 1453 days
645.0
TCGA-C5-A8XI-01A
0 years, female, black or african american, stage:Stage IB, alive, 254 days
630.4
TCGA-VS-A9V2-01A
0 years, female, white, stage:Stage IB, alive, 555 days
616.2
TCGA-C5-A1M9-01A
0 years, female, white, stage:Stage IB, dead, 1065 days
605.7
TCGA-VS-A9UQ-01A
0 years, female, stage:Stage IB, alive, 1263 days
596.5
TCGA-EA-A411-01A
0 years, female, white, stage:Stage IB, alive, 747 days
595.6
TCGA-VS-A9UJ-01A
0 years, female, stage:Stage IIB, dead, 52 days
592.8
TCGA-EK-A2RC-01A
0 years, female, stage:Stage IB, alive, 129 days
589.9
TCGA-EK-A2PL-01A
0 years, female, white, stage:Stage IIIB, alive, 13 days
588.6
TCGA-HM-A3JJ-01A
0 years, female, black or african american, stage:Stage IB, dead, 659 days
583.6
TCGA-C5-A905-01A
0 years, female, black or african american, stage:Stage IB, alive, 4879 days
583.4
TCGA-C5-A1M6-01A
0 years, female, white, stage:Stage IIB, dead, 955 days
578.5
TCGA-VS-AA62-01A
0 years, female, white, stage:Stage IIB, dead, 469 days
578.2
TCGA-EK-A2IR-01A
0 years, female, white, stage:Stage IB, alive, 3442 days
573.3
TCGA-MY-A5BE-01A
0 years, female, black or african american, stage:Stage IB, alive, 1066 days
568.1
TCGA-C5-A2M2-01A
0 years, female, white, stage:Stage IB, dead, 1011 days
564.5
TCGA-JW-AAVH-01A
0 years, female, white, stage:Stage IB, alive, 552 days
552.7
TCGA-MA-AA42-01A
0 years, female, white, stage:Stage IIB, alive, 259 days
539.9
TCGA-FU-A57G-01A
0 years, female, white, stage:Stage IB, alive, 1078 days
538.5
TCGA-MA-AA43-01A
0 years, female, white, stage:Stage IIIB, alive, 346 days
537.6
TCGA-DR-A0ZM-01A
0 years, female, white, stage:Stage IIIB, alive, 1791 days
527.4
TCGA-MA-AA3W-01A
0 years, female, white, stage:Stage IB, alive, 685 days
524.3
TCGA-VS-A9U6-01A
0 years, female, white, stage:Stage IVB, alive, 1320 days
519.8
TCGA-EA-A5O9-01A
0 years, female, white, stage:Stage IB, alive, 788 days
518.4
TCGA-EK-A2R9-01A
0 years, female, white, stage:Stage IB, alive, 4 days
515.9
TCGA-C5-A7CO-01A
0 years, female, white, stage:Stage IB, alive, 4482 days
513.1
TCGA-FU-A23L-01A
0 years, female, white, stage:Stage IIA, alive, 725 days
505.9
TCGA-VS-A9U7-01A
0 years, female, white, stage:Stage IB, alive, 1472 days
501.0
TCGA-MU-A5YI-01A
0 years, female, black or african american, stage:Stage IA, alive, 1053 days
500.2
TCGA-DS-A1OA-01A
0 years, female, asian, stage:Stage IB, dead, 879 days
492.2
TCGA-C5-A1BJ-01A
0 years, female, white, stage:Stage IIB, alive, 4385 days
490.0
TCGA-LP-A4AW-01A
0 years, female, asian, stage:Stage IA, alive, 27 days
485.2
TCGA-EA-A3HS-01A
0 years, female, white, stage:Stage IB, alive, 959 days
482.8
TCGA-Q1-A5R2-01A
0 years, female, white, stage:'--, alive, 499 days
482.2
TCGA-C5-A3HE-01A
0 years, female, white, stage:Stage IB, alive, 548 days
475.1
TCGA-FU-A3WB-01A
0 years, female, white, stage:Stage IIA, alive, 491 days
474.2
TCGA-EA-A5ZD-01A
0 years, female, asian, stage:Stage IB, alive, 830 days
471.4
TCGA-Q1-A6DV-01A
0 years, female, asian, stage:Stage IB, alive, 491 days
467.7
TCGA-GH-A9DA-01A
0 years, female, white, stage:Stage IB, alive, 540 days
465.8
TCGA-C5-A7X8-01A
0 years, female, white, stage:Stage IB, alive, 83 days
456.9
TCGA-VS-A8EG-01A
0 years, female, stage:Stage IB, alive, 1386 days
455.0
TCGA-IR-A3LH-01A
0 years, female, black or african american, stage:Stage IIA, alive, 2394 days
448.8
TCGA-BI-A0VR-01A
0 years, female, white, stage:Stage IIIB, alive, 1505 days
447.4
TCGA-LP-A5U3-01A
0 years, female, asian, stage:Stage IB, alive, 25 days
442.1
TCGA-EX-A1H5-01A
0 years, female, black or african american, stage:Stage IIB, alive, 619 days
439.0
TCGA-ZJ-AAXA-01A
0 years, female, white, stage:Stage IB, alive, 43 days
423.0
TCGA-EK-A3GN-01A
0 years, female, white, stage:Stage IIIB, alive, 27 days
422.5
TCGA-VS-A958-01A
0 years, female, white, stage:Stage IIB, alive, 1525 days
416.4
TCGA-EA-A410-01A
0 years, female, white, stage:Stage IIA, alive, 803 days
414.0
TCGA-R2-A69V-01A
0 years, female, white, stage:Stage IB, alive, 596 days
404.5
TCGA-VS-A9UB-01A
0 years, female, stage:Stage IIB, alive, 911 days
402.5
TCGA-EK-A2H1-01A
0 years, female, white, stage:Stage IB, alive, 799 days
394.0
TCGA-Q1-A73O-01A
0 years, female, stage:Stage IB, alive, 428 days
389.2
TCGA-JW-A5VI-01A
0 years, female, american indian or alaska native, stage:Stage IIB, alive, 747 days
387.8
TCGA-C5-A3HF-01A
0 years, female, white, stage:Stage IB, dead, 543 days
383.6
TCGA-C5-A7CM-01A
0 years, female, white, stage:Stage IB, alive, 619 days
382.6
TCGA-HM-A4S6-01A
0 years, female, white, stage:Stage IIIB, alive, 454 days
381.6
TCGA-C5-A7X5-01A
0 years, female, black or african american, stage:Stage IVB, dead, 414 days
381.3
TCGA-HG-A2PA-01A
0 years, female, white, stage:Stage IB, dead, 773 days
380.1
TCGA-C5-A8XJ-01A
0 years, female, white, stage:Stage IB, alive, 4467 days
379.9
TCGA-DS-A7WH-01A
0 years, female, white, stage:Stage IB, alive, 533 days
379.9
TCGA-EK-A2RB-01A
0 years, female, white, stage:Stage IVB, alive, 9 days
378.0
TCGA-C5-A7CL-01A
0 years, female, white, stage:Stage IIIB, dead, 471 days
374.8
TCGA-ZJ-AAX4-01A
0 years, female, white, stage:Stage II, alive, 21 days
373.2
TCGA-C5-A7UC-01A
0 years, female, white, stage:Stage IB, dead, 523 days
369.4
TCGA-VS-A9U5-01A
0 years, female, white, stage:Stage IIB, alive, 1535 days
367.9
TCGA-IR-A3LC-01A
0 years, female, white, stage:Stage IB, alive, 3935 days
366.4
TCGA-C5-A1M8-01A
0 years, female, white, stage:Stage IB, alive, 919 days
363.8
TCGA-EA-A1QT-01A
0 years, female, white, stage:Stage IB, alive, 1243 days
361.3
TCGA-FU-A3NI-01A
0 years, female, white, stage:Stage IB, dead, 638 days
353.4
TCGA-C5-A1MN-01A
0 years, female, white, stage:Stage IIIB, dead, 1245 days
351.7
TCGA-C5-A1MH-01A
0 years, female, white, stage:Stage IIIB, dead, 1186 days
348.5
TCGA-VS-A9V4-01A
0 years, female, white, stage:Stage IVA, dead, 132 days
347.5
TCGA-JW-A5VK-01A
0 years, female, black or african american, stage:Stage IB, alive, 623 days
345.0
TCGA-DG-A2KL-01A
0 years, female, stage:Stage IIA, alive, 1367 days
343.0
TCGA-EK-A2RO-01A
0 years, female, american indian or alaska native, stage:Stage IIB, alive, 2 days
340.8
TCGA-VS-A8EL-01A
0 years, female, black or african american, stage:Stage IIB, alive, 1992 days
340.0
TCGA-ZJ-A8QR-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage I, dead, 582 days
336.8
TCGA-JX-A5QV-01A
0 years, female, white, stage:Stage IB, alive, 636 days
335.6
TCGA-2W-A8YY-01A
0 years, female, white, stage:Stage IB, alive, 533 days
335.6
TCGA-C5-A8XK-01A
0 years, female, black or african american, stage:'--, alive, 3039 days
332.0
TCGA-IR-A3LK-01A
0 years, female, white, stage:Stage IB, dead, 908 days
331.5
TCGA-VS-A9UO-01A
0 years, female, white, stage:Stage IIB, alive, 1456 days
325.4
TCGA-C5-A0TN-01A
0 years, female, black or african american, stage:Stage IB, dead, 348 days
323.7
TCGA-VS-A8QF-01A
0 years, female, white, stage:Stage IIB, alive, 1800 days
323.2
TCGA-C5-A1BL-01A
0 years, female, white, stage:Stage IB, alive, 5271 days
318.8
TCGA-EK-A2RK-01A
0 years, female, white, stage:Stage IA, alive, 13 days
318.5
TCGA-JW-A5VG-01A
0 years, female, american indian or alaska native, stage:Stage IIA, alive, 834 days
317.3
TCGA-C5-A7X3-01A
0 years, female, white, stage:Stage IIIB, dead, 284 days
299.4
TCGA-C5-A1MJ-01A
0 years, female, white, stage:Stage IB, dead, 14 days
296.4
TCGA-FU-A3TX-01A
0 years, female, stage:Stage IB, alive, 45 days
291.8
TCGA-C5-A7XC-01A
0 years, female, white, stage:Stage IB, alive, 1551 days
289.2
TCGA-VS-A9UH-01A
0 years, female, black or african american, stage:Stage IVA, alive, 1427 days
288.7
TCGA-Q1-A6DT-01A
0 years, female, white, stage:Stage I, dead, 275 days
286.4
TCGA-MA-AA41-01A
0 years, female, white, stage:Stage IIB, alive, 279 days
284.0
TCGA-FU-A3YQ-01A
0 years, female, white, stage:Stage IB, alive, 861 days
281.5
TCGA-EX-A3L1-01A
0 years, female, white, stage:Stage IIA, alive, 463 days
279.6
TCGA-VS-A959-01A
0 years, female, stage:Stage IIB, alive, 1561 days
270.3
TCGA-VS-A9UM-01A
0 years, female, black or african american, stage:Stage IVB, dead, 829 days
268.5
TCGA-EX-A8YF-01A
0 years, female, white, stage:Stage IB, alive, 473 days
265.0
TCGA-JW-A5VL-01A
0 years, female, american indian or alaska native, stage:Stage IB, alive, 474 days
264.9
TCGA-DS-A7WI-01A
0 years, female, white, stage:Stage IIA, dead, 252 days
258.2
TCGA-C5-A2LV-01A
0 years, female, black or african american, stage:Stage IB, alive, 2234 days
257.8
TCGA-EA-A3HR-01A
0 years, female, white, stage:Stage II, alive, 940 days
252.7
TCGA-FU-A770-01A
0 years, female, white, stage:Stage IIIB, alive, 34 days
241.7
TCGA-VS-A9UI-01A
0 years, female, white, stage:Stage IIB, dead, 1372 days
240.2
TCGA-IR-A3LB-01A
0 years, female, white, stage:Stage IB, dead, 2032 days
239.6
TCGA-C5-A7CG-01A
0 years, female, white, stage:Stage IB, alive, 6408 days
236.2
TCGA-ZX-AA5X-01A
0 years, female, white, stage:Stage IIIB, alive, 119 days
235.9
TCGA-EK-A3GJ-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IB, alive, 3 days
228.3
TCGA-Q1-A6DW-01A
0 years, female, white, stage:Stage I, alive, 534 days
228.1
TCGA-LP-A5U2-01A
0 years, female, asian, stage:Stage IIIB, alive, 9 days
227.7
TCGA-C5-A7UE-01A
0 years, female, white, stage:Stage IB, alive, 4738 days
227.4
TCGA-FU-A40J-01A
0 years, female, white, stage:Stage IIIB, alive, 426 days
224.6
TCGA-DS-A3LQ-01A
0 years, female, stage:Stage IIIB, alive, 699 days
223.9
TCGA-C5-A907-01A
0 years, female, white, stage:Stage IB, alive, 448 days
221.8
TCGA-FU-A2QG-01A
0 years, female, white, stage:Stage IB, alive, 579 days
220.9
TCGA-EA-A97N-01A
0 years, female, white, stage:Stage IB, alive, 11 days
220.1
TCGA-VS-A8EK-01A
0 years, female, white, stage:Stage IVA, dead, 829 days
217.8
TCGA-UC-A7PF-01A
0 years, female, stage:Stage IB, dead, 2859 days
216.9
TCGA-VS-A9UY-01A
0 years, female, stage:Stage IVB, dead, 555 days
212.5
TCGA-VS-A954-01A
0 years, female, stage:Stage IIIB, alive, 1714 days
210.8
TCGA-VS-A957-01A
0 years, female, white, stage:Stage IB, alive, 1688 days
206.7
TCGA-EA-A3QD-01A
0 years, female, white, stage:Stage IIIB, alive, 397 days
205.1
TCGA-C5-A1M7-01A
0 years, female, white, stage:Stage IB, alive, 1409 days
204.8
TCGA-EK-A3GK-01A
0 years, female, white, stage:Stage IB, alive, 15 days
193.7
TCGA-BI-A0VS-01A
0 years, female, white, stage:Stage IB, alive, 1735 days
193.7
TCGA-MA-AA3Y-01A
0 years, female, white, stage:Stage IB, alive, 542 days
193.3
TCGA-VS-A9UV-01A
0 years, female, stage:Stage IVA, dead, 104 days
192.6
TCGA-C5-A901-01A
0 years, female, white, stage:'--, alive, 518 days
191.1
TCGA-EA-A3QE-01A
0 years, female, white, stage:Stage IB, alive, 761 days
190.8
TCGA-DG-A2KM-01A
0 years, female, stage:Stage IB, alive, 1946 days
188.9
TCGA-DR-A0ZL-01A
0 years, female, asian, stage:Stage IB, alive, 2669 days
187.3
TCGA-VS-A8EC-01A
0 years, female, white, stage:Stage IIIB, alive, 1415 days
182.2
TCGA-VS-A8QM-01A
0 years, female, stage:Stage IVB, dead, 951 days
182.1
TCGA-LP-A4AU-01A
0 years, female, asian, stage:Stage IIIB, alive, 343 days
178.1
TCGA-C5-A7UI-01A
0 years, female, black or african american, stage:Stage IB, dead, 2888 days
170.4
TCGA-Q1-A73Q-01A
0 years, female, white, stage:Stage I, alive, 284 days
168.0
TCGA-VS-A950-01A
0 years, female, stage:Stage IIIA, alive, 1221 days
166.9
TCGA-VS-A9UC-01A
0 years, female, stage:Stage IIB, alive, 825 days
165.3
TCGA-EK-A2PK-01A
0 years, female, white, stage:Stage IB, alive, 12 days
164.0
TCGA-C5-A7CK-01A
0 years, female, white, stage:Stage IVA, dead, 4086 days
157.9
TCGA-VS-A953-01A
0 years, female, stage:Stage IVA, dead, 477 days
156.4
TCGA-EK-A2PM-01A
0 years, female, white, stage:Stage IIB, alive, 18 days
154.0
TCGA-C5-A902-01A
0 years, female, black or african american, stage:Stage IB, alive, 149 days
153.6
TCGA-VS-A8QC-01A
0 years, female, white, stage:Stage IVA, dead, 350 days
148.6
TCGA-MY-A5BF-01A
0 years, female, white, stage:Stage IIA, alive, 634 days
148.5
TCGA-C5-A8ZZ-01A
0 years, female, white, stage:Stage IIB, alive, 636 days
147.9
TCGA-FU-A3TQ-01A
0 years, female, white, stage:Stage IIIB, alive, 795 days
143.2
TCGA-WL-A834-01A
0 years, female, white, stage:'--, alive, 791 days
142.6
TCGA-MU-A8JM-01A
0 years, female, white, stage:Stage IB, alive, 607 days
140.3
TCGA-EK-A2IP-01A
0 years, female, white, stage:Stage IB, alive, 202 days
138.7
TCGA-C5-A7CH-01A
0 years, female, white, stage:Stage IIB, alive, 4694 days
137.6
TCGA-DS-A1OB-01A
0 years, female, white, stage:Stage IB, dead, 861 days
137.6
TCGA-VS-A94Y-01A
0 years, female, white, stage:Stage IIB, dead, 144 days
136.7
TCGA-C5-A1MQ-01A
0 years, female, white, stage:Stage IIA, alive, 1031 days
129.1
TCGA-EA-A44S-01A
0 years, female, white, stage:Stage IIIB, alive, 369 days
125.6
TCGA-EA-A50E-01A
0 years, female, asian, stage:Stage IVA, dead, 227 days
122.2
TCGA-VS-A8QH-01A
0 years, female, white, stage:Stage IB, dead, 1210 days
121.9
TCGA-VS-A9UU-01A
0 years, female, stage:Stage IIB, alive, 442 days
119.1
TCGA-DS-A0VN-01A
0 years, female, white, stage:Stage IB, alive, 3609 days
114.5
TCGA-FU-A3HZ-01A
0 years, female, white, stage:Stage IIA, alive, 1103 days
109.8
TCGA-EK-A2PG-01A
0 years, female, black or african american, stage:'--, alive, 46 days
108.7
TCGA-DG-A2KH-01A
0 years, female, stage:Stage IB, alive, 34 days
108.1
TCGA-FU-A5XV-01A
0 years, female, white, stage:Stage IIIB, alive, 321 days
106.1
TCGA-IR-A3LL-01A
0 years, female, white, stage:Stage IB, alive, 1106 days
103.5
TCGA-EK-A2RN-01A
0 years, female, white, stage:Stage IB, alive, 71 days
101.7
TCGA-FU-A3HY-01A
0 years, female, white, stage:Stage IB, alive, 954 days
100.6
TCGA-UC-A7PG-01A
0 years, female, white, stage:Stage IIIB, dead, 370 days
85.0
TCGA-JW-A5VH-01A
0 years, female, american indian or alaska native, stage:Stage IVB, dead, 100 days
74.3
TCGA-C5-A8YR-01A
0 years, female, white, stage:Stage IB, dead, 837 days
68.3
TCGA-ZJ-A8QQ-01A
0 years, female, white, stage:Stage IIB, alive, 2056 days
66.8
TCGA-ZJ-AAXU-01A
0 years, female, white, stage:Stage IIB, alive, 5 days
65.6
TCGA-C5-A7UH-01A
0 years, female, white, stage:Stage IIIB, alive, 3988 days
64.0
TCGA-EK-A2H0-01A
0 years, female, white, stage:Stage IIB, alive, 1847 days
63.8
TCGA-C5-A8YQ-01A
0 years, female, white, stage:Stage IB, dead, 715 days
63.0
TCGA-C5-A2LT-01A
0 years, female, white, stage:Stage IB, alive, 2226 days
62.9
TCGA-VS-A952-01A
0 years, female, white, stage:Stage IB, alive, 1778 days
59.5
TCGA-MA-AA3X-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 617 days
56.1
TCGA-EK-A2RE-01A
0 years, female, white, stage:Stage IIA, alive, 57 days
38.1
TCGA-EK-A2RJ-01A
0 years, female, white, stage:Stage IB, alive, 53 days
16.4
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CERVICAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.