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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
41.2
nTPM
GTEx:
41.2
nTPM
FANTOM5:
197.0
Scaled Tags Per Million
Pig:
13.4
nTPM
Mouse:
40.3
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
41.2
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 41.2
Samples: 105
Max nTPM: 241.5
Min nTPM: 6.8
Std nTPM: 31.6
Median nTPM:
218_1
71 years, female
241.5
354_1
81 years, female
163.9
322_1
76 years, male
114.5
6_1
73 years, female
105.1
379_1
60 years, male
103.6
319_1
81 years, male
84.7
351_1
91 years, male
82.8
386_1
76 years, male
81.4
350_1
84 years, female
78.4
452_1
88 years, female
78.0
316_1
62 years, male
74.4
353_1
82 years, female
67.7
348_1
84 years, male
66.4
447_1
81 years, male
65.6
349_1
83 years, male
63.3
318_1
68 years, male
62.8
173_1
67 years, male
62.6
320_1
89 years, female
62.2
237_1
82 years, male
59.3
307_1
66 years, female
57.0
243_1
75 years, male
55.7
145_1
84 years, male
53.6
506_1
65 years, male
53.2
518_1
75 years, female
52.1
35_1
74 years, female
52.0
41_1
94 years, female
50.6
375_1
74 years, female
50.4
355_1
70 years, female
49.9
4_1
88 years, female
48.6
311_1
78 years, male
47.5
286_1
68 years, female
46.1
335_1
73 years, female
45.3
396_1
62 years, male
45.2
308_1
70 years, female
44.7
384_1
83 years, male
44.2
347_1
72 years, male
43.5
17_1
71 years, male
43.3
43_1
64 years, female
42.3
317_1
60 years, male
42.2
405_1
91 years, male
40.7
377_1
82 years, female
39.6
163_1
78 years, male
37.9
352_1
62 years, male
37.3
42_1
85 years, male
35.1
295_1
61 years, female
35.1
376_1
75 years, female
35.0
120_1
70 years, female
34.9
172_1
72 years, female
34.1
109_1
81 years, female
34.0
162_1
79 years, female
34.0
2_1
77 years, female
33.1
137_1
83 years, male
32.5
142_1
61 years, female
32.5
117_1
61 years, male
32.3
356_1
87 years, female
31.4
264_1
73 years, female
30.6
288_1
66 years, female
30.5
315_1
62 years, female
30.2
291_1
76 years, male
29.5
526_1
61 years, male
29.2
491_1
89 years, female
29.1
177_1
74 years, male
28.9
293_1
68 years, female
28.2
503_1
68 years, male
28.2
389_1
86 years, female
28.1
394_1
75 years, female
28.1
292_1
71 years, male
28.0
265_1
87 years, male
27.9
313_1
79 years, female
27.5
18_1
88 years, male
27.0
251_1
78 years, male
25.7
425_1
59 years, female
25.7
490_1
67 years, female
25.6
495_1
57 years, female
25.5
189_1
76 years, male
25.2
324_1
76 years, male
24.9
406_1
79 years, male
24.5
81_1
67 years, male
23.0
139_1
64 years, female
22.8
480_1
63 years, male
22.8
314_1
67 years, male
22.4
229_1
69 years, female
22.3
517_1
88 years, male
21.7
321_1
62 years, female
21.2
115_1
83 years, male
21.0
9_1
66 years, female
20.8
266_1
85 years, male
20.8
99_1
64 years, male
19.8
404_1
82 years, female
18.2
415_1
77 years, female
18.2
153_1
70 years, female
17.8
501_1
88 years, male
17.5
468_1
89 years, male
17.3
499_1
55 years, female
15.9
246_1
77 years, male
15.6
254_1
77 years, female
15.1
119_1
70 years, female
14.0
217_1
76 years, male
13.2
126_1
63 years, male
12.5
32_1
67 years, male
11.9
414_1
84 years, female
11.8
466_1
57 years, female
11.8
89_1
63 years, male
9.9
149_1
88 years, male
9.7
413_1
59 years, female
6.8
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.