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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
47.2
nTPM
HPA Brain:
165.5
nTPM
GTEx:
47.2
nTPM
FANTOM5:
105.1
Scaled Tags Per Million
Pig:
29.6
nTPM
Mouse:
38.4
nTPM
Allen mouse:
2.7
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
165.5
Sample id
Sample description
nTPM
Amygdala nTPM: 90.3
2695
Female, age 67, right hemisphere
133.3
2517
Female, age 94, left hemisphere
92.6
2814
Male, age 76, right hemisphere
90.5
1987
Female, age 91, left hemisphere
68.1
2514
Male, age 75, right hemisphere
67.1
Basal amygdala nTPM: 119.8
2827
Female, age 67, right hemisphere
256.6
2110
Male, age 80, left hemisphere
99.7
2609
Male, age 75, right hemisphere
98.8
2685
Female, age 94, left hemisphere
94.4
2243
Female, age 91, right hemisphere
92.1
1955
Male, age 76, both hemispheres
77.2
Central amygdala nTPM: 100.3
2826
Female, age 94, left hemisphere
170.0
2239
Male, age 80, left hemisphere
94.1
2515
Male, age 75, right hemisphere
91.8
1905
Male, age 76, both hemispheres
81.8
2701
Female, age 91, right hemisphere
63.7
Corticomedial amygdala nTPM: 89.0
2535
Female, age 67, right hemisphere
146.7
2829
Male, age 80, left hemisphere
91.7
2428
Male, age 75, right hemisphere
90.4
2240
Male, age 76, both hemispheres
70.1
2242
Female, age 91, right hemisphere
67.8
2429
Female, age 94, left hemisphere
67.3
Lateral amygdala nTPM: 165.5
2830
Female, age 67, right hemisphere
420.3
2534
Female, age 94, left hemisphere
138.4
2516
Male, age 75, right hemisphere
124.6
2255
Female, age 91, right hemisphere
104.6
2256
Male, age 80, left hemisphere
103.5
1883
Male, age 76, both hemispheres
101.3
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
47.2
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 47.2
Samples: 152
Max nTPM: 211.7
Min nTPM: 10.2
Std nTPM: 29.0
Median nTPM: 39.1
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
211.7
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
164.6
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
146.6
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
136.5
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
136.0
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
104.6
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
101.9
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
99.5
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
94.8
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
93.1
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
86.5
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
85.3
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
84.4
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
82.7
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
79.6
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
78.5
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
77.6
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
77.3
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
76.9
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
74.2
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
70.3
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
70.2
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
70.2
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
69.6
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
67.9
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
67.6
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
67.1
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
65.6
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
63.4
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
62.7
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
61.3
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
61.2
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
60.6
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
59.9
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
59.6
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
58.1
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
57.4
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
57.0
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
56.5
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
55.4
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
54.7
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
54.5
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
54.3
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
53.1
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
52.1
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
51.7
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
51.4
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
51.3
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
50.5
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
50.4
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
50.4
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
50.3
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
49.0
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
48.8
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
47.8
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
47.4
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
46.9
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
46.9
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
46.7
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
46.4
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
45.5
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
45.3
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
45.3
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
44.8
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
44.5
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
44.3
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
44.1
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
43.8
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
43.0
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
42.7
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
40.2
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
40.1
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
40.0
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
39.8
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
39.2
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
39.1
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
39.1
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
39.1
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
38.6
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
38.4
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
38.2
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
37.4
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
37.2
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
36.4
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
36.1
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
35.3
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
35.2
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
35.2
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
35.1
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
35.1
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
34.2
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
34.1
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
33.9
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
33.8
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
33.5
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
33.2
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
32.8
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
32.6
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
32.1
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
31.6
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
31.4
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
31.3
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
31.3
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
30.1
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
30.0
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
30.0
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
29.6
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
29.5
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
29.4
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
29.4
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
29.3
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
29.2
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
28.9
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
28.9
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
28.8
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
28.6
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
28.3
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
28.2
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
28.1
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
27.6
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
27.4
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
27.3
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
27.2
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
27.1
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
27.0
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
26.8
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
26.6
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
26.1
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
26.0
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
25.9
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
25.4
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
25.0
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
24.6
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
24.1
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
22.5
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
22.4
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
22.1
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
22.0
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
21.3
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
21.0
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
20.9
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
20.3
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
19.4
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
19.1
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
17.7
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
17.1
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
16.6
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
16.3
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
15.7
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
15.3
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
13.5
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
10.2
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
38.4
Mouse sample
Sample description
nTPM
Amygdala nTPM: 38.4
Samples: 4
Max nTPM: 46.7
Min nTPM: 34.6
Sample A
Male
34.9
Sample B
Male
34.6
Sample C
Female
46.7
Sample D
Female
37.5
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.