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CHD8
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                                          • SUMMARY

                                          • TISSUE

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                                          • CHD8
                                          TISSUE ENDOMETRIUM Show tissue menu
                                          ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
                                          DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE
                                          MIDBRAIN OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
                                          SMALL INTESTINE SMOOTH MUSCLE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
                                          Dictionary
                                          Endometrium
                                          Tissue proteome
                                          Endometrium
                                          Tissue methods
                                          ENDOMETRIUM - Expression summary
                                          Protein expressioni

                                          On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

                                          No data
                                          RNA expressioni

                                          A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

                                          Scroll down to view mRNA expression data in more detail.

                                          Consensus:16.1 nTPM
                                          HPA:12.9 nTPM
                                          GTEx:16.1 nTPM
                                          FANTOM5:37.2 Scaled Tags Per Million
                                          ENDOMETRIUM - SINGLE CELL RNA EXPRESSION
                                          Explore single cell type data
                                          Endometrial ciliated cellsEndometrial glandular cellsEndometrial secretory cellsEndometrial luminal cellsVascular endothelial cellsLymphatic endothelial cellsEndometrial stromal cellsMacrophagesT-cellsInnate lymphoid cellsB-cellsPDCsNK-cells020406080100nCPM

                                          ENDOMETRIUM - Annotated protein expression
                                          Pending normal tissue analysis

                                          ENDOMETRIUM - HPA RNA-seqi

                                          The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

                                          Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

                                          Average nTPMi

                                          Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

                                          12.9
                                          overview
                                          Female, age 34
                                          Endometrium sample 113
                                          nTPM: 11.2
                                          Cell types%
                                          Glandular cells:
                                          5

                                          Stromal cells:
                                          25

                                          Smooth muscle cells:
                                          65

                                          Other cell types:
                                          5

                                          overview
                                          Female, age 56
                                          Endometrium sample 114
                                          nTPM: 11.5
                                          Cell types%
                                          Glandular cells:
                                          5

                                          Stromal cells:
                                          15

                                          Smooth muscle cells:
                                          75

                                          Other cell types:
                                          5

                                          overview
                                          Female, age 40
                                          Endometrium sample 268
                                          nTPM: 11.8
                                          Cell types%
                                          Glandular cells:
                                          5

                                          Stromal cells:
                                          20

                                          Smooth muscle cells:
                                          70

                                          Other cell types:
                                          5

                                          overview
                                          Female, age 60
                                          Endometrium sample 297
                                          nTPM: 13.8
                                          Cell types%
                                          Glandular cells:
                                          5

                                          Stromal cells:
                                          20

                                          Smooth muscle cells:
                                          75

                                          Other cell types:
                                          0

                                          overview
                                          Female, age 83
                                          Endometrium sample 301
                                          nTPM: 16.4
                                          Cell types%
                                          Glandular cells:
                                          5

                                          Stromal cells:
                                          10

                                          Smooth muscle cells:
                                          80

                                          Other cell types:
                                          5


                                          ENDOMETRIUM - GTEx RNA-seqi

                                          RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

                                          Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

                                          Max subtype nTPMi

                                          Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

                                          16.1
                                          GTEx sample id Sample description nTPM
                                          14.116.218.011.322.60246810121416182022
                                          14.116.218.011.322.60246810121416182022
                                          Uterus - Endometrium
                                          Average nTPM: 16.1
                                          Samples: 27

                                          Max nTPM: 22.6
                                          Min nTPM: 11.3
                                          Std nTPM: 2.8
                                          Median nTPM: 16.2
                                          GTEX-ZXES-0726-SM-5E451 30-39 years, female 22.6
                                          GTEX-PX3G-2026-SM-48U1H 20-29 years, female 22.0
                                          GTEX-1MCYP-1226-SM-DTX8H 20-29 years, female 19.8
                                          GTEX-1HCUA-1226-SM-9WPP5 50-59 years, female 18.7
                                          GTEX-Y114-1826-SM-4TT87 50-59 years, female 18.7
                                          GTEX-XUZC-0926-SM-4BOQF 30-39 years, female 18.4
                                          GTEX-1I4MK-1426-SM-B2LWU 50-59 years, female 18.1
                                          GTEX-11EM3-1926-SM-5987U 20-29 years, female 17.9
                                          GTEX-PWN1-2026-SM-48TD9 40-49 years, female 17.7
                                          GTEX-S32W-1426-SM-4AD66 50-59 years, female 17.2
                                          GTEX-13QBU-1626-SM-5LU4S 40-49 years, female 16.7
                                          GTEX-P78B-2526-SM-3P5ZY 40-49 years, female 16.6
                                          GTEX-ZVT2-0426-SM-5E44S 50-59 years, female 16.4
                                          GTEX-13D11-1226-SM-5IFGA 50-59 years, female 16.2
                                          GTEX-T5JW-1526-SM-4DM5E 20-29 years, female 16.0
                                          GTEX-13VXT-1626-SM-5IJES 20-29 years, female 15.5
                                          GTEX-T6MO-1526-SM-4DM57 40-49 years, female 15.1
                                          GTEX-15SHU-2826-SM-H7OGU 40-49 years, female 14.7
                                          GTEX-ZTPG-2026-SM-5O999 20-29 years, female 14.3
                                          GTEX-PWCY-1426-SM-48TCT 20-29 years, female 14.2
                                          GTEX-U3ZN-0726-SM-4DXT5 30-39 years, female 14.0
                                          GTEX-1CAMS-2026-SM-79395 40-49 years, female 13.5
                                          GTEX-1R9PN-0526-SM-DTX86 40-49 years, female 13.0
                                          GTEX-R55G-1626-SM-48FF4 40-49 years, female 12.8
                                          GTEX-14BIN-1526-SM-5P9FL 50-59 years, female 12.1
                                          GTEX-1B932-2726-SM-731ER 40-49 years, female 11.4
                                          GTEX-XV7Q-1526-SM-4BRWB 40-49 years, female 11.3
                                          Show allShow less

                                          ENDOMETRIUM - FANTOM5 CAGEi

                                          RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

                                          Max subtype Scaled Tags Per Millioni

                                          Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

                                          37.2
                                          FANTOM5 sample id Sample description Scaled Tags Per Million
                                          Uterus
                                          Scaled Tags Per Million: 37.2
                                          FF:10100-102D1 23-63 years, female 37.2

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