AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:10.4 nTPM
HPA Brain:31.4 nTPM
GTEx:10.4 nTPM
FANTOM5:26.5 Scaled Tags Per Million
Pig:25.5 nTPM
Mouse:23.9 nTPM
Allen mouse:5.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Brain excitatory neuronsBrain inhibitory neuronsOther brain neuronsAstrocytesBergmann gliaOligodendrocyte progenitor cellsOligodendrocytesMicrogliaEpendymal cellsChoroid plexus epithelial cellsVascular endothelial cellsPericytesVascular smooth muscle cellsFibroblastsMonocytesMacrophagesT-cellsB-cellsNK-cells020406080100nCPM

AMYGDALA - Annotated protein expression
Pending normal tissue analysis

AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi 31.4
Sample id Sample description nTPM
Amygdala
nTPM: 31.4
2814 Male, age 76, right hemisphere 33.9
2514 Male, age 75, right hemisphere 32.5
2695 Female, age 67, right hemisphere 32.2
1987 Female, age 91, left hemisphere 30.5
2517 Female, age 94, left hemisphere 27.9
Basal amygdala
nTPM: 30.6
2609 Male, age 75, right hemisphere 36.2
1955 Male, age 76, both hemispheres 34.0
2243 Female, age 91, right hemisphere 30.0
2685 Female, age 94, left hemisphere 28.4
2827 Female, age 67, right hemisphere 28.2
2110 Male, age 80, left hemisphere 27.0
Central amygdala
nTPM: 29.9
1905 Male, age 76, both hemispheres 33.0
2239 Male, age 80, left hemisphere 31.3
2701 Female, age 91, right hemisphere 30.8
2515 Male, age 75, right hemisphere 30.1
2826 Female, age 94, left hemisphere 24.4
Corticomedial amygdala
nTPM: 30.6
2240 Male, age 76, both hemispheres 34.9
2428 Male, age 75, right hemisphere 32.2
2829 Male, age 80, left hemisphere 31.3
2535 Female, age 67, right hemisphere 29.5
2242 Female, age 91, right hemisphere 28.1
2429 Female, age 94, left hemisphere 27.5
Lateral amygdala
nTPM: 30.1
1883 Male, age 76, both hemispheres 34.8
2516 Male, age 75, right hemisphere 34.0
2255 Female, age 91, right hemisphere 29.9
2830 Female, age 67, right hemisphere 27.5
2256 Male, age 80, left hemisphere 27.3
2534 Female, age 94, left hemisphere 27.3

AMYGDALA - GTEx RNA-seqi
Max subtype nTPMi 10.4
GTEx sample id Sample description nTPM
9.310.511.66.015.00246810121416
Brain - Amygdala
Average nTPM: 10.4
Samples: 181

Max nTPM: 17.0
Min nTPM: 3.8
Std nTPM: 1.9
Median nTPM: 10.5
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 17.0
GTEX-1R46S-0011-R4b-SM-F2TBF 60-69 years, female 15.1
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 15.0
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 14.7
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 14.5
GTEX-ZYY3-0011-R4a-SM-GQ1CY 60-69 years, female 14.0
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 13.7
GTEX-1QP6S-0011-R4b-SM-F33ZY 40-49 years, male 13.6
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 13.5
GTEX-117XS-0011-R4b-SM-GJ3PR 60-69 years, male 13.3
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 13.2
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AMYGDALA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 26.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 26.5
FF:10151-102I7 76 years, female 26.5

AMYGDALA - Pig RNA-seqi
Max subtype nTPMi 25.5
Pig sample Sample description nTPM
23.325.427.723.128.20246810121416182022242628
 		Amygdala
nTPM: 25.5
Samples: 4

Max nTPM: 28.2
Min nTPM: 23.1
Sample A Female 28.2
Sample B Female 23.1
Sample C Male 23.3
Sample D Male 27.5

AMYGDALA - Mouse RNA-seqi
Max subtype nTPMi 23.9
Mouse sample Sample description nTPM
23.125.225.924.726.702468101214161820222426
 		Amygdala
nTPM: 23.9
Samples: 4

Max nTPM: 26.7
Min nTPM: 18.5
Sample A Male 26.7
Sample B Male 24.7
Sample C Female 18.5
Sample D Female 25.7

AMYGDALA - Allen Mouse ISHi
Max subtype Expression energyi 5.7
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 5.7
71735072 Antisense, RP_050719_04_F12, Mouse strain C57BL/6J (56 days, male) 11.2
68844247 Antisense, RP_050222_01_B12, Mouse strain C57BL/6J (56 days, male) 6.5
71211471 Antisense, RP_050816_01_F07, Mouse strain C57BL/6J (56 days, male) 4.1
70920099 Antisense, RP_050713_02_F09, Mouse strain C57BL/6J (56 days, male) 0.9

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