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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
14.9
nTPM
HPA:
11.6
nTPM
GTEx:
14.9
nTPM
FANTOM5:
34.1
Scaled Tags Per Million
CERVIX - Annotated protein expression
Pending normal tissue analysis
CERVIX - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
11.6
Female, age 44
Cervix sample 374 nTPM: 11.1
Cell types%
Glandular cells:
10
Squamous epithelial cells:
5
Smooth muscle cells:
65
Other cell types:
20
Female, age 53
Cervix sample 383 nTPM: 12.1
Cell types%
Glandular cells:
10
Squamous epithelial cells:
5
Smooth muscle cells:
65
Other cell types:
20
CERVIX - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
14.9
GTEx sample id
Sample description
nTPM
Cervix - Ectocervix Average nTPM: 14.9
Samples: 24
Max nTPM: 21.9
Min nTPM: 9.7
Std nTPM: 2.7
Median nTPM: 15.3
GTEX-TML8-0826-SM-GNIN4
40-49 years, female
21.9
GTEX-PX3G-2226-SM-GOQZQ
20-29 years, female
18.2
GTEX-S341-1126-SM-4AD6T
40-49 years, female
17.9
GTEX-Q734-1526-SM-GQ1EE
40-49 years, female
17.6
GTEX-PWN1-2126-SM-H6Q83
40-49 years, female
17.2
GTEX-P4QT-2126-SM-H6Q7H
50-59 years, female
16.8
GTEX-P4PP-2226-SM-GRR1L
30-39 years, female
16.6
GTEX-OHPL-2126-SM-GPRYM
60-69 years, female
15.5
GTEX-R55G-1826-SM-HL9TM
40-49 years, female
15.5
GTEX-Q2AG-2326-SM-EZ6KY
40-49 years, female
15.4
GTEX-QVJO-2726-SM-GQ1CG
60-69 years, female
15.4
GTEX-T5JW-0726-SM-4DM6D
20-29 years, female
15.4
GTEX-S4UY-1426-SM-4AD6Y
40-49 years, female
15.2
GTEX-POMQ-1526-SM-HL9TL
20-29 years, female
14.9
GTEX-QCQG-1026-SM-GOQYG
50-59 years, female
14.5
GTEX-S32W-1526-SM-4AD6Z
50-59 years, female
14.5
GTEX-T6MO-1326-SM-H7OGZ
40-49 years, female
13.6
GTEX-TMMY-2026-SM-GPI8C
40-49 years, female
13.4
GTEX-T2IS-2326-SM-HL9TW
20-29 years, female
13.1
GTEX-SN8G-2126-SM-GPI8G
50-59 years, female
12.6
GTEX-P78B-2326-SM-EZ6KO
40-49 years, female
11.8
GTEX-QDT8-2626-SM-GPI86
30-39 years, female
10.4
GTEX-N7MT-0826-SM-EV794
60-69 years, female
9.9
GTEX-TSE9-2826-SM-4DXTF
60-69 years, female
9.7
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Cervix - Endocervix Average nTPM: 14.7
Samples: 23
Max nTPM: 23.2
Min nTPM: 9.0
Std nTPM: 3.4
Median nTPM: 15.1
GTEX-OHPK-2226-SM-HL9TP
50-59 years, female
23.2
GTEX-ZPIC-1326-SM-DO91Y
40-49 years, female
19.4
GTEX-PWN1-2226-SM-HAUZA
40-49 years, female
18.5
GTEX-RU1J-1126-SM-GPRWI
20-29 years, female
18.5
GTEX-S4UY-1526-SM-GNTAF
40-49 years, female
16.9
GTEX-P4PP-2126-SM-H7OF1
30-39 years, female
16.8
GTEX-TML8-0726-SM-4DXTT
40-49 years, female
16.2
GTEX-RWS6-1626-SM-GOQYA
60-69 years, female
16.0
GTEX-OHPL-2226-SM-G9ER8
60-69 years, female
15.8
GTEX-PX3G-2126-SM-HL9TS
20-29 years, female
15.7
GTEX-Q734-1726-SM-HL9TR
40-49 years, female
15.3
GTEX-PLZ4-2226-SM-EZ6KS
50-59 years, female
15.1
GTEX-QCQG-1126-SM-GOQYH
50-59 years, female
15.0
GTEX-S32W-1626-SM-4AD6G
50-59 years, female
14.1
GTEX-QVJO-2826-SM-F21IP
60-69 years, female
13.7
GTEX-S341-1326-SM-4AD72
40-49 years, female
13.0
GTEX-T5JW-0826-SM-EYYVD
20-29 years, female
12.4
GTEX-T2IS-2426-SM-HL9U4
20-29 years, female
11.8
GTEX-TSE9-2726-SM-4DXSQ
60-69 years, female
11.0
GTEX-OHPN-2226-SM-E9TI7
60-69 years, female
10.5
GTEX-T6MO-1426-SM-4DM73
40-49 years, female
10.1
GTEX-P78B-2426-SM-EWRM2
40-49 years, female
9.5
GTEX-N7MT-0926-SM-HAUYT
60-69 years, female
9.0
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CERVIX - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
The Human Protein Atlas project is funded
