HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:30.8 nTPM
HPA Brain:15.5 nTPM
GTEx:30.8 nTPM
FANTOM5:63.2 Scaled Tags Per Million
Pig:36.6 nTPM
Mouse:81.0 nTPM
Allen mouse:6.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038465Antibody HPA038466
Glial cells HighMedium
Neuronal cells HighMedium

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 15.5
Sample id Sample description nTPM
Hippocampus
nTPM: 15.3
1898 Male, age 80, left hemisphere 21.7
2529 Female, age 94, left hemisphere 16.1
2148 Female, age 91, left hemisphere 14.7
1855 Male, age 76, left hemisphere 13.8
1911 Female, age 85, right hemisphere 13.4
2621 Female, age 67, right hemisphere 12.3
Dentate gyrus
nTPM: 13.9
2010 Male, age 76, both hemispheres 16.9
1927 Female, age 91, both hemispheres 16.5
2528 Male, age 74, both hemispheres 13.5
2530 Female, age 94, left hemisphere 12.7
2531 Female, age 67, both hemispheres 12.6
2246 Female, age 85, both hemispheres 11.4
Entorhinal gyrus
nTPM: 15.1
2117 Female, age 91, right hemisphere 18.2
1787 Male, age 76, left hemisphere 17.2
2764 Male, age 80, right hemisphere 16.1
1938 Female, age 85, left hemisphere 14.5
2613 Female, age 94, left hemisphere 12.4
2686 Male, age 75, right hemisphere 12.4
Hippocampus, CA1
nTPM: 15.1
2749 Male, age 80, left hemisphere 20.4
2045 Male, age 76, both hemispheres 14.7
2527 Male, age 74, both hemispheres 14.6
2082 Female, age 91, right hemisphere 12.9
1873 Female, age 85, both hemispheres 12.6
Hippocampus, CA2
nTPM: 15.5
1963 Male, age 80, left hemisphere 19.9
1892 Male, age 76, both hemispheres 18.8
2249 Male, age 74, both hemispheres 14.6
1940 Female, age 85, left hemisphere 13.7
2437 Female, age 94, left hemisphere 13.5
2113 Female, age 91, right hemisphere 12.8
Hippocampus, CA3
nTPM: 15.5
1867 Male, age 76, both hemispheres 18.5
2137 Male, age 80, left hemisphere 17.3
2436 Male, age 74, both hemispheres 16.7
1891 Female, age 85, both hemispheres 15.0
2620 Female, age 94, left hemisphere 14.5
2861 Female, age 67, both hemispheres 10.8
Parahippocampal cortex
nTPM: 14.4
1933 Female, age 85, both hemispheres 18.3
1850 Male, age 80, both hemispheres 16.9
2532 Female, age 72, left hemisphere 16.5
2692 Male, age 74, both hemispheres 15.1
2693 Female, age 94, both hemispheres 14.4
2018 Male, age 76, both hemispheres 14.3
1990 Female, age 91, right hemisphere 14.0
2250 Female, age 67, right hemisphere 11.6
2245 Female, age 91, both hemispheres 11.5
2622 Female, age 67, right hemisphere 11.5
Perirhinal gyrus
nTPM: 15.0
1847 Female, age 91, left hemisphere 19.6
1794 Male, age 80, right hemisphere 14.8
2521 Female, age 94, right hemisphere 14.1
1841 Female, age 85, right hemisphere 13.5
2848 Male, age 76, right hemisphere 13.0
Subiculum
nTPM: 14.4
1901 Male, age 80, both hemispheres 18.6
1977 Female, age 85, both hemispheres 15.9
2042 Male, age 76, both hemispheres 15.8
2729 Female, age 91, right hemisphere 13.1
2619 Male, age 74, both hemispheres 11.8
2438 Female, age 94, left hemisphere 11.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 30.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 30.8
Samples: 197

Max nTPM: 56.1
Min nTPM: 13.5
Std nTPM: 6.8
Median nTPM: 30.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 56.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 51.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 51.4
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 49.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 48.8
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 47.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 46.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 45.5
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 43.4
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 42.6
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 41.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 63.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 63.2
FF:10169-103B7 60 years, female 66.4
FF:10153-102I9 76 years, female 59.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 36.6
Pig sample Sample description nTPM
Subiculum
nTPM: 35.6
Samples: 4

Max nTPM: 42.5
Min nTPM: 31.8
Sample A Female 42.5
Sample B Female 32.9
Sample C Male 31.8
Sample D Male 35.1
Dorsal hippocampus
nTPM: 36.6
Samples: 4

Max nTPM: 41.9
Min nTPM: 32.1
Sample A Female 41.9
Sample B Female 34.9
Sample C Male 37.5
Sample D Male 32.1
Entorhinal cortex
nTPM: 35.1
Samples: 4

Max nTPM: 38.4
Min nTPM: 30.8
Sample A Female 36.5
Sample B Female 38.4
Sample C Male 34.8
Sample D Male 30.8
Ventral hippocampus
nTPM: 35.3
Samples: 4

Max nTPM: 40.2
Min nTPM: 28.7
Sample A Female 40.2
Sample B Female 28.7
Sample C Male 36.6
Sample D Male 35.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 81.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 74.1
Samples: 4

Max nTPM: 82.9
Min nTPM: 68.3
Sample A Male 68.4
Sample B Male 68.3
Sample C Female 82.9
Sample D Female 76.7
Hippocampal formation
nTPM: 81.0
Samples: 4

Max nTPM: 89.3
Min nTPM: 72.0
Sample A Male 89.3
Sample B Male 72.0
Sample C Female 82.0
Sample D Female 80.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 6.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.0
70539157 Antisense, RP_050324_01_A04, Mouse strain C57BL/6J (56 days, male) 6.0

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