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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
30.9
nTPM
HPA Brain:
17.2
nTPM
GTEx:
30.9
nTPM
FANTOM5:
63.3
Scaled Tags Per Million
Pig:
29.5
nTPM
Mouse:
74.5
nTPM
Allen mouse:
4.3
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
17.2
Sample id
Sample description
nTPM
Amygdala nTPM: 17.2
2514
Male, age 75, right hemisphere
18.3
1987
Female, age 91, left hemisphere
18.2
2517
Female, age 94, left hemisphere
17.8
2695
Female, age 67, right hemisphere
17.6
2814
Male, age 76, right hemisphere
14.2
Basal amygdala nTPM: 15.8
2243
Female, age 91, right hemisphere
16.9
2827
Female, age 67, right hemisphere
16.7
2110
Male, age 80, left hemisphere
16.5
2609
Male, age 75, right hemisphere
16.5
2685
Female, age 94, left hemisphere
15.5
1955
Male, age 76, both hemispheres
12.5
Central amygdala nTPM: 14.7
2826
Female, age 94, left hemisphere
20.6
2515
Male, age 75, right hemisphere
14.2
1905
Male, age 76, both hemispheres
14.0
2239
Male, age 80, left hemisphere
13.2
2701
Female, age 91, right hemisphere
11.5
Corticomedial amygdala nTPM: 12.5
2428
Male, age 75, right hemisphere
15.7
2829
Male, age 80, left hemisphere
14.6
2429
Female, age 94, left hemisphere
12.9
2240
Male, age 76, both hemispheres
11.5
2535
Female, age 67, right hemisphere
10.3
2242
Female, age 91, right hemisphere
10.2
Lateral amygdala nTPM: 14.8
2830
Female, age 67, right hemisphere
18.6
2516
Male, age 75, right hemisphere
17.6
2534
Female, age 94, left hemisphere
16.4
1883
Male, age 76, both hemispheres
15.4
2256
Male, age 80, left hemisphere
10.5
2255
Female, age 91, right hemisphere
10.2
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
30.9
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 30.9
Samples: 152
Max nTPM: 62.3
Min nTPM: 16.9
Std nTPM: 7.3
Median nTPM: 29.7
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
62.3
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
57.8
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
52.3
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
49.9
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
46.7
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
46.1
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
45.4
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
44.3
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
43.7
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
42.7
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
42.3
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
42.0
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
41.8
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
41.6
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
41.1
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
40.8
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
40.3
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
40.3
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
40.2
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
38.6
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
37.8
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
37.7
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
37.4
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
37.2
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
36.7
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
36.6
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
36.4
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
36.2
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
35.6
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
35.5
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
35.5
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
35.4
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
35.2
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
35.2
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
35.0
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
35.0
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
34.8
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
34.6
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
34.5
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
34.3
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
33.9
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
33.9
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
33.9
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
33.8
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
33.6
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
33.6
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
32.8
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
32.7
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
32.6
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
32.6
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
32.3
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
32.1
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
32.1
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
32.0
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
32.0
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
31.9
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
31.9
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
31.8
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
31.7
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
31.6
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
31.4
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
31.3
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
31.2
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
31.2
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
31.2
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
31.0
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
30.9
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
30.7
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
30.6
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
30.2
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
29.9
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
29.8
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
29.8
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
29.8
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
29.7
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
29.7
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
29.7
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
29.7
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
29.7
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
29.6
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
29.4
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
29.4
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
29.4
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
29.3
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
29.3
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
29.2
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
29.1
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
29.1
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
29.1
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
29.0
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
28.9
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
28.9
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
28.3
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
28.2
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
28.2
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
28.1
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
28.0
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
27.9
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
27.7
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
27.5
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
27.3
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
27.3
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
27.2
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
27.1
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
27.1
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
26.9
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
26.9
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
26.8
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
26.7
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
26.7
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
26.5
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
26.5
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
26.2
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
26.1
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
25.8
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
25.8
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
25.8
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
25.8
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
25.7
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
25.4
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
25.4
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
25.1
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
25.1
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
24.9
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
24.7
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
24.7
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
24.6
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
24.5
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
24.4
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
24.2
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
24.2
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
24.1
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
24.0
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
23.9
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
23.8
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
23.6
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
23.5
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
23.2
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
23.1
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
22.2
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
22.1
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
21.9
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
21.6
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
20.4
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
19.9
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
19.7
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
19.5
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
18.7
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
18.4
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
17.8
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
17.4
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
16.9
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
74.5
Mouse sample
Sample description
nTPM
Amygdala nTPM: 74.5
Samples: 4
Max nTPM: 78.9
Min nTPM: 68.8
Sample A
Male
71.7
Sample B
Male
78.9
Sample C
Female
68.8
Sample D
Female
78.7
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
