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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
141.7
nTPM
GTEx:
141.7
nTPM
FANTOM5:
430.4
Scaled Tags Per Million
Pig:
263.4
nTPM
Mouse:
195.0
nTPM
RETINA - Annotated protein expression
Pending normal tissue analysis
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
141.7
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 141.7
Samples: 105
Max nTPM: 199.4
Min nTPM: 87.1
Std nTPM: 23.2
Median nTPM:
452_1
88 years, female
199.4
379_1
60 years, male
198.3
319_1
81 years, male
192.4
321_1
62 years, female
184.7
351_1
91 years, male
181.7
386_1
76 years, male
181.7
322_1
76 years, male
179.2
6_1
73 years, female
178.5
218_1
71 years, female
175.5
349_1
83 years, male
175.1
352_1
62 years, male
174.3
447_1
81 years, male
172.8
177_1
74 years, male
172.2
243_1
75 years, male
170.3
173_1
67 years, male
170.0
120_1
70 years, female
169.9
347_1
72 years, male
168.5
99_1
64 years, male
167.9
4_1
88 years, female
165.7
375_1
74 years, female
164.8
145_1
84 years, male
161.8
354_1
81 years, female
160.3
376_1
75 years, female
159.8
163_1
78 years, male
159.0
506_1
65 years, male
158.7
142_1
61 years, female
158.4
308_1
70 years, female
158.2
17_1
71 years, male
156.7
404_1
82 years, female
155.7
356_1
87 years, female
155.4
394_1
75 years, female
154.1
317_1
60 years, male
153.3
153_1
70 years, female
152.7
384_1
83 years, male
151.6
377_1
82 years, female
150.6
396_1
62 years, male
150.0
189_1
76 years, male
149.7
119_1
70 years, female
148.8
295_1
61 years, female
148.2
389_1
86 years, female
147.4
115_1
83 years, male
146.7
324_1
76 years, male
144.3
350_1
84 years, female
142.9
414_1
84 years, female
142.7
172_1
72 years, female
142.3
355_1
70 years, female
142.2
2_1
77 years, female
141.8
526_1
61 years, male
141.5
353_1
82 years, female
140.7
316_1
62 years, male
140.5
162_1
79 years, female
140.1
406_1
79 years, male
140.0
318_1
68 years, male
139.6
307_1
66 years, female
139.4
490_1
67 years, female
139.2
320_1
89 years, female
138.3
41_1
94 years, female
138.0
335_1
73 years, female
137.9
491_1
89 years, female
137.8
229_1
69 years, female
137.2
126_1
63 years, male
136.5
315_1
62 years, female
136.3
237_1
82 years, male
136.2
117_1
61 years, male
136.1
266_1
85 years, male
134.9
35_1
74 years, female
133.7
313_1
79 years, female
133.1
293_1
68 years, female
132.8
480_1
63 years, male
131.9
503_1
68 years, male
131.1
9_1
66 years, female
130.4
137_1
83 years, male
129.7
415_1
77 years, female
129.5
499_1
55 years, female
129.3
501_1
88 years, male
127.6
405_1
91 years, male
126.8
18_1
88 years, male
125.9
468_1
89 years, male
123.6
265_1
87 years, male
123.3
254_1
77 years, female
123.1
109_1
81 years, female
123.0
425_1
59 years, female
122.3
292_1
71 years, male
122.2
286_1
68 years, female
121.9
42_1
85 years, male
121.3
264_1
73 years, female
120.4
495_1
57 years, female
119.9
246_1
77 years, male
119.6
518_1
75 years, female
118.6
311_1
78 years, male
117.9
413_1
59 years, female
117.6
466_1
57 years, female
116.2
81_1
67 years, male
115.9
291_1
76 years, male
115.3
517_1
88 years, male
114.0
251_1
78 years, male
113.1
348_1
84 years, male
113.0
139_1
64 years, female
110.0
217_1
76 years, male
109.8
288_1
66 years, female
107.3
314_1
67 years, male
105.1
32_1
67 years, male
102.5
89_1
63 years, male
100.5
43_1
64 years, female
87.8
149_1
88 years, male
87.1
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
