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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
224.0
nTPM
HPA Brain:
124.5
nTPM
GTEx:
224.0
nTPM
FANTOM5:
291.4
Scaled Tags Per Million
Pig:
503.4
nTPM
Mouse:
99.7
nTPM
Allen mouse:
0.0
Expression energy
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
124.5
Sample id
Sample description
nTPM
Amygdala nTPM: 124.5
2514
Male, age 75, right hemisphere
131.0
2814
Male, age 76, right hemisphere
130.6
1987
Female, age 91, left hemisphere
129.0
2695
Female, age 67, right hemisphere
120.6
2517
Female, age 94, left hemisphere
111.6
Basal amygdala nTPM: 103.3
2609
Male, age 75, right hemisphere
127.5
1955
Male, age 76, both hemispheres
114.5
2110
Male, age 80, left hemisphere
99.9
2243
Female, age 91, right hemisphere
97.8
2685
Female, age 94, left hemisphere
93.3
2827
Female, age 67, right hemisphere
87.0
Central amygdala nTPM: 122.5
1905
Male, age 76, both hemispheres
140.2
2515
Male, age 75, right hemisphere
132.0
2826
Female, age 94, left hemisphere
121.9
2701
Female, age 91, right hemisphere
117.6
2239
Male, age 80, left hemisphere
100.7
Corticomedial amygdala nTPM: 109.9
2428
Male, age 75, right hemisphere
126.8
2242
Female, age 91, right hemisphere
120.5
2240
Male, age 76, both hemispheres
119.8
2429
Female, age 94, left hemisphere
113.0
2829
Male, age 80, left hemisphere
101.3
2535
Female, age 67, right hemisphere
77.8
Lateral amygdala nTPM: 106.6
2516
Male, age 75, right hemisphere
121.2
1883
Male, age 76, both hemispheres
116.5
2830
Female, age 67, right hemisphere
106.2
2256
Male, age 80, left hemisphere
101.8
2534
Female, age 94, left hemisphere
99.1
2255
Female, age 91, right hemisphere
94.8
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
224.0
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 224.0
Samples: 152
Max nTPM: 554.7
Min nTPM: 92.4
Std nTPM: 68.9
Median nTPM: 210.0
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
554.7
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
509.2
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
437.9
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
420.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
394.6
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
387.8
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
377.4
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
326.4
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
325.8
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
322.8
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
321.9
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
312.7
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
312.2
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
297.9
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
295.2
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
293.7
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
293.6
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
290.5
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
290.4
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
289.0
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
288.0
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
285.6
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
285.3
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
284.1
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
276.6
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
276.4
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
275.8
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
275.5
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
272.1
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
270.7
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
267.9
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
263.4
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
257.7
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
257.2
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
255.0
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
253.5
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
252.3
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
251.3
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
250.8
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
250.6
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
250.4
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
249.3
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
248.5
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
248.0
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
246.7
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
246.6
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
243.0
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
242.9
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
238.5
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
238.1
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
236.4
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
236.4
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
235.9
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
235.5
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
234.6
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
234.2
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
233.6
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
232.0
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
230.4
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
229.9
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
229.3
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
229.0
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
228.6
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
226.7
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
226.2
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
222.4
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
222.0
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
220.6
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
219.4
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
219.1
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
218.7
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
215.3
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
214.2
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
213.2
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
210.3
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
210.2
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
209.9
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
209.8
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
209.7
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
208.9
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
208.1
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
208.0
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
207.9
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
207.8
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
205.4
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
203.6
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
201.6
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
200.9
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
199.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
197.4
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
195.4
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
194.8
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
194.0
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
193.6
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
193.4
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
192.9
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
191.9
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
191.9
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
190.7
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
190.5
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
190.1
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
190.1
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
189.7
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
189.7
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
189.3
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
189.2
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
188.0
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
186.5
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
185.9
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
185.8
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
184.7
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
184.0
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
183.6
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
182.1
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
181.6
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
180.3
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
180.3
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
177.7
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
177.4
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
176.8
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
175.1
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
175.0
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
174.6
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
174.6
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
172.1
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
169.4
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
169.4
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
168.9
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
167.3
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
166.0
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
164.5
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
161.4
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
156.7
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
155.5
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
155.1
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
152.0
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
151.6
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
150.2
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
149.6
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
149.6
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
147.2
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
146.7
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
145.0
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
143.3
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
141.8
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
136.2
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
131.9
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
129.8
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
126.7
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
110.5
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
109.2
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
92.4
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
99.7
Mouse sample
Sample description
nTPM
Amygdala nTPM: 99.7
Samples: 4
Max nTPM: 116.8
Min nTPM: 93.5
Sample A
Male
93.6
Sample B
Male
94.8
Sample C
Female
116.8
Sample D
Female
93.5
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.