HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:166.6 nTPM
HPA Brain:119.5 nTPM
GTEx:166.6 nTPM
FANTOM5:311.1 Scaled Tags Per Million
Pig:553.8 nTPM
Mouse:94.0 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 119.5
Sample id Sample description nTPM
Hippocampus
nTPM: 118.3
2529 Female, age 94, left hemisphere 134.0
1898 Male, age 80, left hemisphere 128.2
1855 Male, age 76, left hemisphere 127.1
2621 Female, age 67, right hemisphere 110.3
1911 Female, age 85, right hemisphere 107.1
2148 Female, age 91, left hemisphere 102.9
Dentate gyrus
nTPM: 109.8
2010 Male, age 76, both hemispheres 136.3
2530 Female, age 94, left hemisphere 118.5
2246 Female, age 85, both hemispheres 112.4
1927 Female, age 91, both hemispheres 104.5
2528 Male, age 74, both hemispheres 102.6
2531 Female, age 67, both hemispheres 84.6
Entorhinal gyrus
nTPM: 104.0
1787 Male, age 76, left hemisphere 126.8
1938 Female, age 85, left hemisphere 114.5
2117 Female, age 91, right hemisphere 109.7
2686 Male, age 75, right hemisphere 98.4
2764 Male, age 80, right hemisphere 93.6
2613 Female, age 94, left hemisphere 81.0
Hippocampus, CA1
nTPM: 116.3
2045 Male, age 76, both hemispheres 133.3
1873 Female, age 85, both hemispheres 118.0
2749 Male, age 80, left hemisphere 117.3
2527 Male, age 74, both hemispheres 114.6
2082 Female, age 91, right hemisphere 98.5
Hippocampus, CA2
nTPM: 111.0
2249 Male, age 74, both hemispheres 123.0
2437 Female, age 94, left hemisphere 115.1
1892 Male, age 76, both hemispheres 114.9
1963 Male, age 80, left hemisphere 108.9
2113 Female, age 91, right hemisphere 105.1
1940 Female, age 85, left hemisphere 99.0
Hippocampus, CA3
nTPM: 105.8
2436 Male, age 74, both hemispheres 137.9
1867 Male, age 76, both hemispheres 119.6
1891 Female, age 85, both hemispheres 104.0
2137 Male, age 80, left hemisphere 101.3
2861 Female, age 67, both hemispheres 89.9
2620 Female, age 94, left hemisphere 82.0
Parahippocampal cortex
nTPM: 108.5
2018 Male, age 76, both hemispheres 145.8
2250 Female, age 67, right hemisphere 124.2
1850 Male, age 80, both hemispheres 111.9
1933 Female, age 85, both hemispheres 107.7
2532 Female, age 72, left hemisphere 104.6
1990 Female, age 91, right hemisphere 102.0
2692 Male, age 74, both hemispheres 101.8
2245 Female, age 91, both hemispheres 100.8
2622 Female, age 67, right hemisphere 93.2
2693 Female, age 94, both hemispheres 92.9
Perirhinal gyrus
nTPM: 115.2
1847 Female, age 91, left hemisphere 130.6
1794 Male, age 80, right hemisphere 119.7
1841 Female, age 85, right hemisphere 110.7
2521 Female, age 94, right hemisphere 110.7
2848 Male, age 76, right hemisphere 104.3
Subiculum
nTPM: 119.5
2438 Female, age 94, left hemisphere 138.9
2042 Male, age 76, both hemispheres 134.6
1977 Female, age 85, both hemispheres 118.1
2619 Male, age 74, both hemispheres 109.7
1901 Male, age 80, both hemispheres 108.6
2729 Female, age 91, right hemisphere 107.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 166.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 166.6
Samples: 197

Max nTPM: 340.0
Min nTPM: 97.6
Std nTPM: 41.8
Median nTPM: 158.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 340.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 312.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 301.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 288.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 284.7
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 284.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 281.2
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 274.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 250.4
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 248.9
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 239.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 311.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 311.1
FF:10169-103B7 60 years, female 352.0
FF:10153-102I9 76 years, female 270.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 553.8
Pig sample Sample description nTPM
Subiculum
nTPM: 507.9
Samples: 4

Max nTPM: 719.8
Min nTPM: 426.1
Sample A Female 719.8
Sample B Female 458.3
Sample C Male 427.2
Sample D Male 426.1
Dorsal hippocampus
nTPM: 530.0
Samples: 4

Max nTPM: 682.8
Min nTPM: 397.3
Sample A Female 682.8
Sample B Female 482.4
Sample C Male 557.4
Sample D Male 397.3
Entorhinal cortex
nTPM: 553.8
Samples: 4

Max nTPM: 651.7
Min nTPM: 374.3
Sample A Female 651.7
Sample B Female 579.4
Sample C Male 609.6
Sample D Male 374.3
Ventral hippocampus
nTPM: 499.3
Samples: 4

Max nTPM: 549.9
Min nTPM: 404.2
Sample A Female 542.8
Sample B Female 404.2
Sample C Male 500.3
Sample D Male 549.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 94.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 94.1
Samples: 4

Max nTPM: 102.1
Min nTPM: 89.5
Sample A Male 89.5
Sample B Male 95.1
Sample C Female 102.1
Sample D Female 89.5
Hippocampal formation
nTPM: 91.9
Samples: 4

Max nTPM: 98.0
Min nTPM: 81.8
Sample A Male 96.2
Sample B Male 81.8
Sample C Female 91.5
Sample D Female 98.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
631702 Antisense, RP_040907_01_A02, Mouse strain C57BL/6J (56 days, male) 0.1

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