HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:58.3 nTPM
HPA Brain:120.9 nTPM
GTEx:58.3 nTPM
FANTOM5:200.3 Scaled Tags Per Million
Pig:224.3 nTPM
Mouse:134.3 nTPM
Allen mouse:4.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA065425Antibody CAB069426
Glial cells Not detectedLow
Neuronal cells Not detectedMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 120.9
Sample id Sample description nTPM
Hippocampus
nTPM: 112.3
1898 Male, age 80, left hemisphere 148.5
2529 Female, age 94, left hemisphere 120.7
1911 Female, age 85, right hemisphere 109.6
2148 Female, age 91, left hemisphere 99.7
1855 Male, age 76, left hemisphere 99.6
2621 Female, age 67, right hemisphere 95.5
Dentate gyrus
nTPM: 113.2
2010 Male, age 76, both hemispheres 142.7
1927 Female, age 91, both hemispheres 115.3
2246 Female, age 85, both hemispheres 114.1
2530 Female, age 94, left hemisphere 112.5
2528 Male, age 74, both hemispheres 109.2
2531 Female, age 67, both hemispheres 85.5
Entorhinal gyrus
nTPM: 101.5
1938 Female, age 85, left hemisphere 126.5
2117 Female, age 91, right hemisphere 123.7
2764 Male, age 80, right hemisphere 105.2
1787 Male, age 76, left hemisphere 96.5
2686 Male, age 75, right hemisphere 93.2
2613 Female, age 94, left hemisphere 63.7
Hippocampus, CA1
nTPM: 120.9
2749 Male, age 80, left hemisphere 137.7
1873 Female, age 85, both hemispheres 135.4
2045 Male, age 76, both hemispheres 113.2
2527 Male, age 74, both hemispheres 112.1
2082 Female, age 91, right hemisphere 106.2
Hippocampus, CA2
nTPM: 115.6
2249 Male, age 74, both hemispheres 135.9
1963 Male, age 80, left hemisphere 121.6
1940 Female, age 85, left hemisphere 119.3
1892 Male, age 76, both hemispheres 118.7
2113 Female, age 91, right hemisphere 104.3
2437 Female, age 94, left hemisphere 94.0
Hippocampus, CA3
nTPM: 105.0
1867 Male, age 76, both hemispheres 128.8
1891 Female, age 85, both hemispheres 127.5
2137 Male, age 80, left hemisphere 119.7
2436 Male, age 74, both hemispheres 101.1
2861 Female, age 67, both hemispheres 81.7
2620 Female, age 94, left hemisphere 71.4
Parahippocampal cortex
nTPM: 106.3
1850 Male, age 80, both hemispheres 133.0
1933 Female, age 85, both hemispheres 123.0
2250 Female, age 67, right hemisphere 116.0
2018 Male, age 76, both hemispheres 112.7
1990 Female, age 91, right hemisphere 112.5
2245 Female, age 91, both hemispheres 101.5
2692 Male, age 74, both hemispheres 97.5
2693 Female, age 94, both hemispheres 95.4
2532 Female, age 72, left hemisphere 95.1
2622 Female, age 67, right hemisphere 76.7
Perirhinal gyrus
nTPM: 116.6
1794 Male, age 80, right hemisphere 131.8
1841 Female, age 85, right hemisphere 130.2
1847 Female, age 91, left hemisphere 117.2
2521 Female, age 94, right hemisphere 106.7
2848 Male, age 76, right hemisphere 97.1
Subiculum
nTPM: 105.8
1977 Female, age 85, both hemispheres 120.6
1901 Male, age 80, both hemispheres 115.9
2042 Male, age 76, both hemispheres 114.3
2729 Female, age 91, right hemisphere 111.5
2619 Male, age 74, both hemispheres 89.3
2438 Female, age 94, left hemisphere 83.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 58.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 58.3
Samples: 197

Max nTPM: 168.6
Min nTPM: 30.8
Std nTPM: 14.6
Median nTPM: 56.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 168.6
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 104.1
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 103.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 102.5
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 89.1
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 88.2
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 85.3
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 84.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 80.2
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 80.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 78.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 200.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 200.3
FF:10169-103B7 60 years, female 223.2
FF:10153-102I9 76 years, female 177.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 224.3
Pig sample Sample description nTPM
Subiculum
nTPM: 175.1
Samples: 4

Max nTPM: 197.7
Min nTPM: 165.6
Sample A Female 197.7
Sample B Female 170.5
Sample C Male 165.6
Sample D Male 166.4
Dorsal hippocampus
nTPM: 224.3
Samples: 4

Max nTPM: 252.1
Min nTPM: 195.7
Sample A Female 252.1
Sample B Female 227.3
Sample C Male 222.2
Sample D Male 195.7
Entorhinal cortex
nTPM: 189.3
Samples: 4

Max nTPM: 224.4
Min nTPM: 158.8
Sample A Female 173.9
Sample B Female 224.4
Sample C Male 200.1
Sample D Male 158.8
Ventral hippocampus
nTPM: 184.8
Samples: 4

Max nTPM: 210.1
Min nTPM: 173.8
Sample A Female 178.3
Sample B Female 176.8
Sample C Male 173.8
Sample D Male 210.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 134.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 115.8
Samples: 4

Max nTPM: 120.5
Min nTPM: 112.4
Sample A Male 113.1
Sample B Male 120.5
Sample C Female 117.1
Sample D Female 112.4
Hippocampal formation
nTPM: 134.3
Samples: 4

Max nTPM: 140.9
Min nTPM: 120.9
Sample A Male 140.9
Sample B Male 135.8
Sample C Female 139.5
Sample D Female 120.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 4.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.4
69817205 Antisense, RP_050510_02_H04, Mouse strain C57BL/6J (56 days, male) 4.4

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