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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
63.0
nTPM
HPA Brain:
129.6
nTPM
GTEx:
63.0
nTPM
FANTOM5:
195.6
Scaled Tags Per Million
Pig:
161.4
nTPM
Mouse:
110.2
nTPM
Allen mouse:
1.7
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
129.6
Sample id
Sample description
nTPM
Amygdala nTPM: 129.6
2514
Male, age 75, right hemisphere
147.3
2695
Female, age 67, right hemisphere
137.0
1987
Female, age 91, left hemisphere
132.8
2814
Male, age 76, right hemisphere
121.6
2517
Female, age 94, left hemisphere
109.2
Basal amygdala nTPM: 105.2
2609
Male, age 75, right hemisphere
128.7
2110
Male, age 80, left hemisphere
124.6
2827
Female, age 67, right hemisphere
101.8
1955
Male, age 76, both hemispheres
95.9
2243
Female, age 91, right hemisphere
92.3
2685
Female, age 94, left hemisphere
88.1
Central amygdala nTPM: 121.5
2515
Male, age 75, right hemisphere
148.4
2826
Female, age 94, left hemisphere
144.1
1905
Male, age 76, both hemispheres
110.2
2239
Male, age 80, left hemisphere
109.6
2701
Female, age 91, right hemisphere
95.0
Corticomedial amygdala nTPM: 112.7
2428
Male, age 75, right hemisphere
141.0
2829
Male, age 80, left hemisphere
137.8
2242
Female, age 91, right hemisphere
109.6
2429
Female, age 94, left hemisphere
108.6
2240
Male, age 76, both hemispheres
97.0
2535
Female, age 67, right hemisphere
82.0
Lateral amygdala nTPM: 113.7
2516
Male, age 75, right hemisphere
145.7
2830
Female, age 67, right hemisphere
123.5
2534
Female, age 94, left hemisphere
112.8
1883
Male, age 76, both hemispheres
109.2
2256
Male, age 80, left hemisphere
105.4
2255
Female, age 91, right hemisphere
85.5
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
63.0
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 63.0
Samples: 152
Max nTPM: 108.2
Min nTPM: 30.6
Std nTPM: 13.1
Median nTPM: 62.2
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
108.2
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
101.1
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
100.5
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
99.3
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
93.8
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
90.1
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
89.9
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
87.3
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
86.3
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
86.0
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
83.7
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
82.8
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
82.8
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
82.7
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
82.7
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
82.1
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
81.7
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
77.3
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
76.9
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
76.5
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
76.5
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
76.1
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
75.7
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
75.4
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
75.0
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
74.1
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
74.1
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
73.7
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
72.9
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
71.9
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
71.2
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
71.2
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
71.0
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
70.4
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
69.3
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
68.9
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
68.6
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
68.3
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
68.0
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
68.0
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
67.9
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
67.7
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
67.2
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
67.0
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
66.9
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
66.7
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
66.2
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
65.8
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
65.7
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
65.1
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
65.0
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
65.0
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
64.9
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
64.8
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
64.8
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
64.7
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
64.6
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
64.5
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
64.3
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
64.2
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
64.1
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
64.0
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
63.9
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
63.8
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
63.6
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
63.4
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
63.3
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
63.3
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
63.2
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
63.0
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
63.0
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
62.6
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
62.6
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
62.5
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
62.5
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
62.3
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
62.2
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
61.3
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
60.8
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
60.4
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
60.4
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
60.4
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
60.3
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
59.9
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
59.9
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
59.8
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
59.4
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
59.3
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
59.3
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
59.2
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
59.2
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
58.8
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
58.7
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
58.6
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
58.6
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
58.5
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
58.4
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
58.3
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
58.0
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
58.0
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
57.8
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
57.7
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
57.6
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
57.6
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
57.2
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
57.1
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
57.1
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
56.8
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
56.7
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
56.7
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
56.6
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
56.3
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
56.3
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
56.1
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
55.7
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
55.5
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
55.4
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
55.1
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
55.0
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
54.7
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
54.6
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
54.6
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
54.5
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
54.3
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
54.3
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
53.9
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
53.4
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
53.0
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
52.8
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
52.5
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
51.7
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
51.3
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
51.1
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
50.6
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
49.8
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
48.2
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
47.2
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
46.6
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
45.1
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
44.9
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
44.4
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
44.1
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
43.9
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
43.7
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
43.2
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
42.4
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
39.7
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
39.1
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
38.6
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
35.6
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
32.2
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
30.6
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
110.2
Mouse sample
Sample description
nTPM
Amygdala nTPM: 110.3
Samples: 4
Max nTPM: 116.0
Min nTPM: 108.0
Sample A
Male
108.0
Sample B
Male
116.0
Sample C
Female
108.3
Sample D
Female
108.7
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.