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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
74.3
nTPM
GTEx:
74.3
nTPM
FANTOM5:
222.5
Scaled Tags Per Million
Pig:
130.3
nTPM
Mouse:
112.1
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
74.3
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 74.3
Samples: 105
Max nTPM: 152.9
Min nTPM: 42.4
Std nTPM: 20.3
Median nTPM:
490_1
67 years, female
152.9
491_1
89 years, female
139.2
162_1
79 years, female
119.2
43_1
64 years, female
116.8
89_1
63 years, male
114.9
139_1
64 years, female
108.2
117_1
61 years, male
107.5
149_1
88 years, male
106.9
32_1
67 years, male
103.5
119_1
70 years, female
102.1
142_1
61 years, female
100.8
413_1
59 years, female
100.1
42_1
85 years, male
99.6
6_1
73 years, female
99.1
81_1
67 years, male
97.8
17_1
71 years, male
96.5
120_1
70 years, female
96.3
415_1
77 years, female
95.4
145_1
84 years, male
91.9
109_1
81 years, female
90.0
35_1
74 years, female
89.0
501_1
88 years, male
88.9
347_1
72 years, male
88.2
466_1
57 years, female
86.0
495_1
57 years, female
85.3
386_1
76 years, male
84.8
9_1
66 years, female
84.5
18_1
88 years, male
84.4
41_1
94 years, female
84.0
315_1
62 years, female
83.3
307_1
66 years, female
82.5
4_1
88 years, female
81.8
137_1
83 years, male
80.9
396_1
62 years, male
80.7
115_1
83 years, male
80.4
126_1
63 years, male
80.3
322_1
76 years, male
79.6
348_1
84 years, male
78.9
414_1
84 years, female
78.8
99_1
64 years, male
77.8
2_1
77 years, female
77.5
324_1
76 years, male
76.8
311_1
78 years, male
75.8
173_1
67 years, male
75.6
313_1
79 years, female
75.6
308_1
70 years, female
75.1
518_1
75 years, female
74.8
217_1
76 years, male
73.9
375_1
74 years, female
73.6
254_1
77 years, female
73.0
379_1
60 years, male
71.7
153_1
70 years, female
71.4
468_1
89 years, male
70.8
229_1
69 years, female
70.4
499_1
55 years, female
69.4
355_1
70 years, female
68.8
526_1
61 years, male
68.7
251_1
78 years, male
67.8
447_1
81 years, male
66.4
288_1
66 years, female
66.1
237_1
82 years, male
64.9
314_1
67 years, male
64.6
246_1
77 years, male
64.2
172_1
72 years, female
64.1
351_1
91 years, male
64.1
316_1
62 years, male
63.6
404_1
82 years, female
63.5
266_1
85 years, male
63.4
189_1
76 years, male
62.9
291_1
76 years, male
62.9
265_1
87 years, male
62.7
389_1
86 years, female
62.7
243_1
75 years, male
61.8
317_1
60 years, male
61.5
354_1
81 years, female
61.2
405_1
91 years, male
60.2
384_1
83 years, male
59.9
353_1
82 years, female
59.2
350_1
84 years, female
59.0
292_1
71 years, male
58.5
335_1
73 years, female
57.2
349_1
83 years, male
56.7
318_1
68 years, male
56.3
425_1
59 years, female
56.3
480_1
63 years, male
56.3
452_1
88 years, female
55.6
218_1
71 years, female
55.4
352_1
62 years, male
55.2
295_1
61 years, female
54.9
506_1
65 years, male
53.8
517_1
88 years, male
53.5
503_1
68 years, male
53.4
286_1
68 years, female
52.7
321_1
62 years, female
52.3
377_1
82 years, female
52.1
293_1
68 years, female
52.0
177_1
74 years, male
51.9
320_1
89 years, female
51.9
356_1
87 years, female
51.5
406_1
79 years, male
50.6
264_1
73 years, female
48.1
394_1
75 years, female
47.2
319_1
81 years, male
46.9
376_1
75 years, female
46.7
163_1
78 years, male
42.4
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
