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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
75.5
nTPM
GTEx:
75.5
nTPM
FANTOM5:
32.0
Scaled Tags Per Million
Pig:
38.2
nTPM
Mouse:
98.5
nTPM
RETINA - Annotated protein expression
Pending normal tissue analysis
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
75.5
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 75.5
Samples: 105
Max nTPM: 141.6
Min nTPM: 45.3
Std nTPM: 16.2
Median nTPM:
490_1
67 years, female
141.6
491_1
89 years, female
126.6
415_1
77 years, female
119.8
413_1
59 years, female
116.4
466_1
57 years, female
105.9
414_1
84 years, female
102.9
495_1
57 years, female
101.0
149_1
88 years, male
99.4
347_1
72 years, male
99.2
313_1
79 years, female
98.2
162_1
79 years, female
93.5
307_1
66 years, female
91.2
142_1
61 years, female
90.6
41_1
94 years, female
90.0
89_1
63 years, male
89.8
324_1
76 years, male
89.8
265_1
87 years, male
89.7
81_1
67 years, male
89.5
32_1
67 years, male
88.2
246_1
77 years, male
87.4
35_1
74 years, female
86.7
526_1
61 years, male
85.6
405_1
91 years, male
85.5
229_1
69 years, female
84.6
375_1
74 years, female
84.3
468_1
89 years, male
84.3
266_1
85 years, male
83.9
117_1
61 years, male
83.6
315_1
62 years, female
83.1
447_1
81 years, male
82.5
115_1
83 years, male
81.6
379_1
60 years, male
81.5
9_1
66 years, female
81.4
126_1
63 years, male
80.2
501_1
88 years, male
80.1
243_1
75 years, male
79.4
499_1
55 years, female
78.6
43_1
64 years, female
78.4
217_1
76 years, male
78.2
120_1
70 years, female
77.5
99_1
64 years, male
77.4
308_1
70 years, female
77.0
355_1
70 years, female
77.0
311_1
78 years, male
76.9
145_1
84 years, male
76.8
389_1
86 years, female
76.8
321_1
62 years, female
76.7
518_1
75 years, female
75.9
139_1
64 years, female
74.5
119_1
70 years, female
74.3
254_1
77 years, female
74.2
6_1
73 years, female
73.7
517_1
88 years, male
73.7
316_1
62 years, male
73.3
237_1
82 years, male
73.1
352_1
62 years, male
72.5
377_1
82 years, female
72.4
322_1
76 years, male
72.2
42_1
85 years, male
71.6
396_1
62 years, male
71.4
18_1
88 years, male
71.2
404_1
82 years, female
70.9
480_1
63 years, male
69.8
251_1
78 years, male
69.6
189_1
76 years, male
69.5
17_1
71 years, male
69.3
137_1
83 years, male
69.2
318_1
68 years, male
69.1
348_1
84 years, male
68.1
173_1
67 years, male
68.0
425_1
59 years, female
68.0
386_1
76 years, male
66.9
153_1
70 years, female
66.3
317_1
60 years, male
65.7
349_1
83 years, male
65.6
288_1
66 years, female
65.3
172_1
72 years, female
65.1
350_1
84 years, female
64.6
314_1
67 years, male
64.4
335_1
73 years, female
64.2
292_1
71 years, male
63.9
177_1
74 years, male
63.6
2_1
77 years, female
63.5
109_1
81 years, female
63.2
286_1
68 years, female
61.5
218_1
71 years, female
61.4
384_1
83 years, male
61.0
351_1
91 years, male
60.6
503_1
68 years, male
60.4
293_1
68 years, female
59.7
376_1
75 years, female
59.1
291_1
76 years, male
58.9
354_1
81 years, female
57.8
353_1
82 years, female
57.5
406_1
79 years, male
57.5
452_1
88 years, female
56.9
4_1
88 years, female
55.6
264_1
73 years, female
54.8
356_1
87 years, female
54.1
319_1
81 years, male
53.6
506_1
65 years, male
52.9
295_1
61 years, female
52.5
320_1
89 years, female
52.4
394_1
75 years, female
50.8
163_1
78 years, male
45.3
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
