HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:17.4 nTPM
HPA Brain:57.3 nTPM
GTEx:17.4 nTPM
FANTOM5:43.8 Scaled Tags Per Million
Pig:56.0 nTPM
Mouse:73.8 nTPM
Allen mouse:6.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 57.3
Sample id Sample description nTPM
Hippocampus
nTPM: 47.2
2529 Female, age 94, left hemisphere 56.9
1898 Male, age 80, left hemisphere 56.0
1855 Male, age 76, left hemisphere 47.8
2621 Female, age 67, right hemisphere 44.8
1911 Female, age 85, right hemisphere 42.1
2148 Female, age 91, left hemisphere 35.4
Dentate gyrus
nTPM: 48.4
1927 Female, age 91, both hemispheres 57.0
2246 Female, age 85, both hemispheres 53.7
2530 Female, age 94, left hemisphere 52.5
2010 Male, age 76, both hemispheres 52.3
2528 Male, age 74, both hemispheres 38.6
2531 Female, age 67, both hemispheres 36.0
Entorhinal gyrus
nTPM: 45.6
1938 Female, age 85, left hemisphere 53.4
1787 Male, age 76, left hemisphere 51.2
2764 Male, age 80, right hemisphere 46.8
2613 Female, age 94, left hemisphere 41.2
2117 Female, age 91, right hemisphere 40.6
2686 Male, age 75, right hemisphere 40.4
Hippocampus, CA1
nTPM: 48.6
2749 Male, age 80, left hemisphere 64.4
1873 Female, age 85, both hemispheres 48.9
2045 Male, age 76, both hemispheres 47.1
2527 Male, age 74, both hemispheres 46.1
2082 Female, age 91, right hemisphere 36.6
Hippocampus, CA2
nTPM: 50.8
2437 Female, age 94, left hemisphere 60.3
1892 Male, age 76, both hemispheres 53.7
1963 Male, age 80, left hemisphere 53.6
1940 Female, age 85, left hemisphere 50.0
2249 Male, age 74, both hemispheres 47.4
2113 Female, age 91, right hemisphere 40.1
Hippocampus, CA3
nTPM: 48.2
2137 Male, age 80, left hemisphere 59.4
2436 Male, age 74, both hemispheres 53.5
1867 Male, age 76, both hemispheres 50.6
2620 Female, age 94, left hemisphere 46.4
1891 Female, age 85, both hemispheres 45.3
2861 Female, age 67, both hemispheres 34.2
Parahippocampal cortex
nTPM: 48.3
1850 Male, age 80, both hemispheres 62.6
2245 Female, age 91, both hemispheres 54.3
1933 Female, age 85, both hemispheres 51.5
1990 Female, age 91, right hemisphere 50.3
2532 Female, age 72, left hemisphere 50.0
2250 Female, age 67, right hemisphere 48.8
2693 Female, age 94, both hemispheres 45.6
2018 Male, age 76, both hemispheres 44.5
2622 Female, age 67, right hemisphere 40.0
2692 Male, age 74, both hemispheres 35.5
Perirhinal gyrus
nTPM: 57.3
1847 Female, age 91, left hemisphere 68.1
1841 Female, age 85, right hemisphere 62.1
1794 Male, age 80, right hemisphere 57.5
2848 Male, age 76, right hemisphere 54.4
2521 Female, age 94, right hemisphere 44.4
Subiculum
nTPM: 44.8
1977 Female, age 85, both hemispheres 53.7
1901 Male, age 80, both hemispheres 53.2
2438 Female, age 94, left hemisphere 43.5
2042 Male, age 76, both hemispheres 41.6
2619 Male, age 74, both hemispheres 39.8
2729 Female, age 91, right hemisphere 37.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 17.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.4
Samples: 197

Max nTPM: 31.6
Min nTPM: 10.6
Std nTPM: 4.0
Median nTPM: 16.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 31.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 30.0
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 29.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 28.6
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 28.0
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 27.8
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 27.6
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 26.8
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 26.2
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 25.6
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 25.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 43.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 43.8
FF:10169-103B7 60 years, female 44.6
FF:10153-102I9 76 years, female 43.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 56.0
Pig sample Sample description nTPM
Subiculum
nTPM: 54.3
Samples: 4

Max nTPM: 67.7
Min nTPM: 48.7
Sample A Female 67.7
Sample B Female 48.7
Sample C Male 48.7
Sample D Male 52.2
Dorsal hippocampus
nTPM: 56.1
Samples: 4

Max nTPM: 66.9
Min nTPM: 45.4
Sample A Female 66.9
Sample B Female 53.4
Sample C Male 58.5
Sample D Male 45.4
Entorhinal cortex
nTPM: 55.4
Samples: 4

Max nTPM: 64.1
Min nTPM: 46.4
Sample A Female 54.9
Sample B Female 64.1
Sample C Male 56.2
Sample D Male 46.4
Ventral hippocampus
nTPM: 48.4
Samples: 4

Max nTPM: 52.5
Min nTPM: 43.4
Sample A Female 52.5
Sample B Female 46.2
Sample C Male 43.4
Sample D Male 51.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 73.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 71.3
Samples: 4

Max nTPM: 77.4
Min nTPM: 62.5
Sample A Male 70.9
Sample B Male 77.4
Sample C Female 74.5
Sample D Female 62.5
Hippocampal formation
nTPM: 73.8
Samples: 4

Max nTPM: 82.7
Min nTPM: 67.4
Sample A Male 82.7
Sample B Male 73.9
Sample C Female 71.0
Sample D Female 67.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 6.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.6
321203 Antisense, RP_040617_01_C05, Mouse strain C57BL/6J (56 days, male) 7.1
76081923 Antisense, RP_060626_01_A03, Mouse strain C57BL/6J (56 days, male) 6.0

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