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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MT-CO2 is not prognostic in Ovary Serous Cystadenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12775.4
Number of samples
349
Samples
Sample
Description
TPM
TCGA-24-1845-01A
0 years, female, white, stage:Stage IIIC, alive, 116 days
49274.2
TCGA-23-1116-01A
0 years, female, white, stage:Stage IIIC, dead, 592 days
44288.7
TCGA-04-1536-01A
0 years, female, black or african american, stage:Stage IV, dead, 885 days
34577.7
TCGA-13-1488-01A
0 years, female, white, stage:Stage IV, dead, 2154 days
31400.5
TCGA-10-0933-01A
0 years, female, white, stage:Stage IIIC, dead, 446 days
31244.3
TCGA-24-1426-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
30577.1
TCGA-24-1104-01A
0 years, female, white, stage:Stage IV, dead, 1933 days
29030.4
TCGA-57-1586-01A
0 years, female, white, stage:Stage IIIC, alive, 679 days
28549.5
TCGA-04-1338-01A
0 years, female, white, stage:Stage IIIC, alive, 1418 days
27745.7
TCGA-04-1651-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
27150.4
TCGA-13-0720-01A
0 years, female, white, stage:Stage IIIC, dead, 1355 days
26774.7
TCGA-04-1331-01A
0 years, female, white, stage:Stage IIIC, dead, 1336 days
26549.9
TCGA-10-0937-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
25703.4
TCGA-13-1403-01A
0 years, female, white, stage:Stage IIIC, dead, 2345 days
24865.4
TCGA-29-1763-01A
0 years, female, black or african american, stage:Stage IIC, alive, 2032 days
24760.6
TCGA-13-1501-01A
0 years, female, white, stage:Stage IV, dead, 1314 days
24225.3
TCGA-24-2297-01A
0 years, female, white, stage:Stage IIIC, dead, 1699 days
24064.1
TCGA-13-1411-01A
0 years, female, white, stage:Stage IIIC, dead, 531 days
23963.5
TCGA-04-1361-01A
0 years, female, white, stage:Stage IIIB, alive, 989 days
23252.6
TCGA-29-1688-01A
0 years, female, white, stage:Stage IIIC, dead, 2400 days
22844.3
TCGA-24-2036-01A
0 years, female, white, stage:Stage IIIA, dead, 1947 days
22843.6
TCGA-23-1119-01A
0 years, female, white, stage:Stage IIIC, alive, 3953 days
22598.3
TCGA-61-2104-01A
0 years, female, white, stage:Stage IIC, alive, 2338 days
22440.6
TCGA-13-1509-01A
0 years, female, white, stage:Stage IV, alive, 2438 days
22316.2
TCGA-13-1485-01A
0 years, female, white, stage:Stage IV, dead, 629 days
22274.4
TCGA-13-1477-01A
0 years, female, white, stage:Stage IV, dead, 1662 days
22035.1
TCGA-13-0887-01A
0 years, female, white, stage:Stage IIIC, dead, 2028 days
21972.6
TCGA-13-1496-01A
0 years, female, white, stage:Stage IIIC, dead, 129 days
21927.4
TCGA-04-1347-01A
0 years, female, white, stage:Stage IV, alive, 1919 days
21841.8
TCGA-24-2271-01A
0 years, female, asian, stage:Stage IIIC, dead, 962 days
21533.8
TCGA-25-1313-01A
0 years, female, white, stage:Stage IV, dead, 820 days
21429.1
TCGA-23-1120-01A
0 years, female, white, stage:Stage IIIC, alive, 130 days
21335.0
TCGA-24-1471-01A
0 years, female, white, stage:Stage IIIC, alive, 36 days
21141.7
TCGA-24-1430-01A
0 years, female, white, stage:Stage IIIC, dead, 863 days
21132.9
TCGA-25-2409-01A
0 years, female, white, stage:Stage IV, dead, 821 days
20509.5
TCGA-24-2290-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
20453.6
TCGA-31-1950-01A
0 years, female, white, stage:Stage IIIC, alive, 571 days
20440.2
TCGA-24-1565-01A
0 years, female, white, stage:Stage IIIC, dead, 312 days
20247.1
TCGA-61-1910-01A
0 years, female, white, stage:Stage IIC, alive, 1127 days
20232.9
TCGA-24-1843-01A
0 years, female, white, stage:Stage IIIC, alive, 106 days
20221.9
TCGA-24-2281-01A
0 years, female, white, stage:Stage IIA, alive, 1357 days
20198.2
TCGA-13-0726-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
20141.7
TCGA-24-0968-01A
0 years, female, white, stage:Stage IIIC, dead, 598 days
19918.9
TCGA-20-1687-01A
0 years, female, white, stage:Stage IV, alive, 81 days
19896.5
TCGA-13-1407-01A
0 years, female, white, stage:Stage IIIC, alive, 2534 days
19859.0
TCGA-24-1428-01A
0 years, female, white, stage:Stage IIIC, alive, 529 days
19691.4
TCGA-13-0891-01A
0 years, female, white, stage:Stage IV, dead, 3128 days
19641.9
TCGA-13-1408-01A
0 years, female, white, stage:Stage IIIC, dead, 1680 days
19597.1
TCGA-24-2026-01A
0 years, female, white, stage:Stage IIIC, dead, 1059 days
19275.7
TCGA-24-1105-01A
0 years, female, white, stage:Stage IIIC, dead, 1442 days
19166.3
TCGA-24-1551-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
19143.0
TCGA-24-1416-01A
0 years, female, white, stage:Stage IV, alive, 194 days
19117.4
TCGA-24-2289-01A
0 years, female, white, stage:Stage IV, dead, 2049 days
18919.8
TCGA-13-0765-01A
0 years, female, white, stage:Stage IIIC, dead, 1389 days
18828.9
TCGA-30-1866-01A
0 years, female, white, stage:Stage IV, dead, 1114 days
18641.9
TCGA-30-1714-01A
0 years, female, white, stage:Stage IV, dead, 1158 days
18497.2
TCGA-04-1343-01A
0 years, female, white, stage:Stage IV, dead, 361 days
18473.3
TCGA-24-1930-01A
0 years, female, white, stage:Stage IIIC, dead, 2467 days
18425.3
TCGA-23-1122-01A
0 years, female, white, stage:Stage IIIC, dead, 1189 days
18351.6
TCGA-25-1318-01A
0 years, female, white, stage:Stage IIIC, dead, 1064 days
18190.1
TCGA-24-1557-01A
0 years, female, white, stage:Stage IIIC, dead, 1213 days
18064.0
TCGA-24-2035-01A
0 years, female, white, stage:Stage IIIC, dead, 857 days
18063.4
TCGA-13-0804-01A
0 years, female, white, stage:Stage IIIC, dead, 1073 days
18060.1
TCGA-24-1923-01A
0 years, female, white, stage:Stage IIIC, dead, 690 days
18006.4
TCGA-30-1857-01A
0 years, female, white, stage:Stage IV, dead, 8 days
17941.3
TCGA-13-1512-01A
0 years, female, white, stage:Stage IIIC, alive, 442 days
17896.0
TCGA-13-1492-01A
0 years, female, white, stage:Stage IIIC, dead, 3819 days
17834.7
TCGA-13-0762-01A
0 years, female, white, stage:Stage IIIC, alive, 3400 days
17721.4
TCGA-04-1365-01A
0 years, female, white, stage:Stage IIIB, alive, 947 days
17671.9
TCGA-24-1423-01A
0 years, female, white, stage:Stage IIIC, alive, 190 days
17595.6
TCGA-04-1655-01A
0 years, female, white, stage:Stage IIIB, dead, 1380 days
17519.3
TCGA-23-1110-01A
0 years, female, white, stage:Stage IIIC, alive, 1658 days
17389.8
TCGA-09-2045-01A
0 years, female, asian, stage:Stage IV, dead, 1069 days
17231.8
TCGA-13-1483-01A
0 years, female, white, stage:Stage IIIC, dead, 895 days
17125.3
TCGA-23-2077-01A
0 years, female, white, stage:Stage IIIC, alive, 3525 days
16793.6
TCGA-24-1467-01A
0 years, female, white, stage:Stage IIIC, dead, 3224 days
16792.7
TCGA-25-1321-01A
0 years, female, white, stage:Stage IIIC, dead, 1033 days
16779.6
TCGA-23-1023-01A
0 years, female, white, stage:Stage IIIC, alive, 1233 days
16745.3
TCGA-25-2392-01A
0 years, female, white, stage:Stage IV, dead, 31 days
16690.5
TCGA-10-0928-01A
0 years, female, white, stage:Stage IIIC, dead, 563 days
16595.6
TCGA-13-0797-01A
0 years, female, white, stage:Stage IIIC, alive, 2121 days
16434.9
TCGA-24-1603-01A
0 years, female, white, stage:Stage IIIB, dead, 2742 days
16314.3
TCGA-30-1853-01A
0 years, female, white, stage:Stage IIIC, dead, 1103 days
16268.2
TCGA-04-1356-01A
0 years, female, white, stage:Stage IIC, dead, 1499 days
16154.4
TCGA-13-1498-01A
0 years, female, white, stage:Stage IIIC, dead, 2012 days
15668.0
TCGA-13-1404-01A
0 years, female, white, stage:Stage IIIC, alive, 2469 days
15667.6
TCGA-24-1546-01A
0 years, female, white, stage:Stage IIIC, dead, 1955 days
15667.5
TCGA-24-0979-01A
0 years, female, white, stage:Stage IV, dead, 1264 days
15603.1
TCGA-04-1648-01A
0 years, female, white, stage:Stage IIIC, dead, 871 days
15580.0
TCGA-04-1362-01A
0 years, female, white, stage:Stage IIC, dead, 1348 days
15522.6
TCGA-25-1315-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
15317.1
TCGA-13-0906-01A
0 years, female, white, stage:Stage IIIC, alive, 3619 days
15309.1
TCGA-23-1030-01A
0 years, female, white, stage:Stage IIIC, alive, 886 days
15304.2
TCGA-24-1464-01A
0 years, female, white, stage:Stage IIIC, dead, 379 days
15282.2
TCGA-24-2293-01A
0 years, female, white, stage:'--, dead, 506 days
15242.1
TCGA-13-1495-01A
0 years, female, white, stage:Stage IIIC, dead, 2749 days
15139.5
TCGA-13-0795-01A
0 years, female, white, stage:Stage IIIC, dead, 619 days
15136.8
TCGA-24-1413-01A
0 years, female, white, stage:Stage IIIC, alive, 192 days
15098.5
TCGA-13-0724-01A
0 years, female, white, stage:Stage IV, dead, 83 days
14650.6
TCGA-23-1028-01A
0 years, female, white, stage:Stage IIIC, alive, 1503 days
14624.7
TCGA-20-1686-01A
0 years, female, white, stage:Stage IIIC, alive, 89 days
14590.1
TCGA-57-1584-01A
0 years, female, white, stage:Stage IIIC, alive, 643 days
14576.6
TCGA-61-2101-01A
0 years, female, white, stage:Stage IIIC, dead, 1688 days
14557.1
TCGA-24-0966-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 232 days
14462.3
TCGA-29-2427-01A
0 years, female, white, stage:Stage IIIC, alive, 1900 days
14460.5
TCGA-10-0931-01A
0 years, female, white, stage:Stage IIIC, dead, 1000 days
14374.0
TCGA-24-1431-01A
0 years, female, white, stage:Stage IIIC, dead, 583 days
14367.2
TCGA-13-1410-01A
0 years, female, white, stage:Stage IV, alive, 2464 days
14310.7
TCGA-24-0982-01A
0 years, female, white, stage:Stage IIIC, dead, 679 days
14301.1
TCGA-31-1953-01A
0 years, female, asian, stage:Stage IIIC, alive, 204 days
14289.6
TCGA-29-2414-01A
0 years, female, white, stage:Stage IIIC, dead, 2621 days
14239.1
TCGA-61-2109-01A
0 years, female, white, stage:Stage IIIC, dead, 629 days
14190.8
TCGA-04-1542-01A
0 years, female, white, stage:Stage IIIB, dead, 2561 days
14115.3
TCGA-13-0768-01A
0 years, female, white, stage:Stage IIIC, dead, 1784 days
14085.0
TCGA-24-1435-01A
0 years, female, white, stage:Stage IIIC, dead, 1324 days
13974.1
TCGA-23-1123-01A
0 years, female, white, stage:Stage IIIC, dead, 1018 days
13947.9
TCGA-25-1322-01A
0 years, female, white, stage:Stage IV, dead, 91 days
13946.7
TCGA-13-1511-01A
0 years, female, asian, stage:Stage IV, dead, 1650 days
13912.1
TCGA-61-1900-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 176 days
13869.2
TCGA-29-1770-01A
0 years, female, white, stage:Stage IIIC, alive, 741 days
13792.9
TCGA-24-2267-01A
0 years, female, white, stage:Stage IIB, dead, 1446 days
13748.3
TCGA-13-1405-01A
0 years, female, white, stage:Stage IV, dead, 868 days
13623.1
TCGA-61-2113-01A
0 years, female, white, stage:Stage IIC, dead, 676 days
13604.9
TCGA-61-2003-01A
0 years, female, white, stage:Stage IIIC, alive, 122 days
13565.4
TCGA-61-1918-01A
0 years, female, white, stage:Stage IV, dead, 479 days
13550.2
TCGA-24-1425-01A
0 years, female, white, stage:Stage IIIC, alive, 181 days
13545.2
TCGA-23-2084-01A
0 years, female, white, stage:Stage IV, dead, 1516 days
13501.8
TCGA-13-1510-01A
0 years, female, white, stage:Stage IIIC, dead, 1359 days
13494.7
TCGA-13-0725-01A
0 years, female, white, stage:Stage IIIC, dead, 377 days
13485.1
TCGA-36-1570-01A
0 years, female, white, stage:Stage IIIC, alive, 655 days
13337.2
TCGA-23-1109-01A
0 years, female, white, stage:Stage IIIC, dead, 1562 days
13304.1
TCGA-61-2111-01A
0 years, female, white, stage:Stage IV, alive, 3825 days
13302.4
TCGA-57-1582-01A
0 years, female, white, stage:Stage IIIC, dead, 731 days
13263.8
TCGA-29-1705-01A
0 years, female, white, stage:Stage IIIC, dead, 555 days
13189.4
TCGA-25-1320-01A
0 years, female, white, stage:Stage IIIC, dead, 1155 days
13102.5
TCGA-13-1487-01A
0 years, female, white, stage:Stage IV, dead, 681 days
13091.5
TCGA-24-1552-01A
0 years, female, white, stage:Stage IIIC, dead, 1259 days
13078.1
TCGA-29-1694-01A
0 years, female, white, stage:Stage IIIC, dead, 1187 days
13045.6
TCGA-24-1604-01A
0 years, female, white, stage:Stage IIIC, dead, 2688 days
13028.7
TCGA-29-1785-01A
0 years, female, white, stage:Stage IIIC, dead, 1104 days
13012.3
TCGA-23-1118-01A
0 years, female, white, stage:Stage IIIC, alive, 2616 days
12970.0
TCGA-59-2355-01A
0 years, female, white, stage:Stage IV, dead, 65 days
12939.0
TCGA-13-1489-01A
0 years, female, white, stage:Stage IIIC, dead, 2553 days
12933.1
TCGA-59-2351-01A
0 years, female, white, stage:Stage IIIC, alive, 3532 days
12897.6
TCGA-13-0916-01A
0 years, female, white, stage:Stage IIIC, alive, 1785 days
12850.1
TCGA-29-1778-01A
0 years, female, white, stage:Stage IIIC, alive, 454 days
12820.5
TCGA-25-1323-01A
0 years, female, white, stage:Stage IIIC, dead, 395 days
12819.8
TCGA-24-2027-01A
0 years, female, white, stage:Stage IV, dead, 3337 days
12793.2
TCGA-04-1530-01A
0 years, female, white, stage:Stage IIIC, dead, 3622 days
12786.3
TCGA-13-0886-01A
0 years, female, white, stage:Stage IIIC, alive, 4665 days
12692.5
TCGA-31-1946-01A
0 years, female, stage:Stage IIIC, alive, 918 days
12612.8
TCGA-24-1616-01A
0 years, female, white, stage:Stage IIIC, dead, 1163 days
12568.9
TCGA-13-1497-01A
0 years, female, white, stage:Stage IIIC, alive, 3871 days
12451.7
TCGA-25-1329-01A
0 years, female, white, stage:Stage IIIC, dead, 457 days
12370.6
TCGA-57-1993-01A
0 years, female, white, stage:Stage IIIC, alive, 763 days
12351.8
TCGA-29-1693-01A
0 years, female, white, stage:Stage IIIC, alive, 3096 days
12297.9
TCGA-31-1944-01A
0 years, female, white, stage:Stage IIIC, alive, 1386 days
12278.4
TCGA-36-1568-01A
0 years, female, stage:Stage IIIC, alive, 875 days
12163.6
TCGA-23-1024-01A
0 years, female, white, stage:Stage IV, alive, 468 days
12159.3
TCGA-25-1326-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
12154.6
TCGA-25-1630-01A
0 years, female, white, stage:Stage IIIC, dead, 1162 days
12150.6
TCGA-59-2354-01A
0 years, female, white, stage:Stage IIIC, dead, 1046 days
12116.0
TCGA-09-1673-01A
0 years, female, white, stage:Stage IV, alive, 92 days
12098.7
TCGA-23-1027-01A
0 years, female, white, stage:Stage IIIC, dead, 976 days
12090.5
TCGA-24-1469-01A
0 years, female, white, stage:Stage IIIC, alive, 277 days
12037.0
TCGA-20-1682-01A
0 years, female, white, stage:Stage IIIC, alive, 837 days
11987.0
TCGA-29-2428-01A
0 years, female, white, stage:Stage IIIC, alive, 1372 days
11957.7
TCGA-24-1419-01A
0 years, female, white, stage:Stage IIIC, alive, 239 days
11921.4
TCGA-25-2396-01A
0 years, female, white, stage:Stage IIIC, dead, 92 days
11867.3
TCGA-09-1670-01A
0 years, female, white, stage:Stage IIIA, alive, 547 days
11864.3
TCGA-24-2288-01A
0 years, female, white, stage:Stage IIIC, dead, 25 days
11799.5
TCGA-61-1725-01A
0 years, female, white, stage:Stage IIIC, alive, 956 days
11785.7
TCGA-24-1422-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 23 days
11762.6
TCGA-30-1892-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
11759.6
TCGA-09-0369-01A
0 years, female, white, stage:Stage IIIC, dead, 1082 days
11746.2
TCGA-36-1577-01A
0 years, female, asian, stage:Stage IIC, alive, 783 days
11745.1
TCGA-13-0885-01A
0 years, female, white, stage:Stage IIIC, alive, 3388 days
11714.2
TCGA-24-2023-01A
0 years, female, white, stage:Stage IIIA, dead, 1364 days
11679.4
TCGA-25-1870-01A
0 years, female, white, stage:Stage IIIC, dead, 455 days
11668.5
TCGA-24-2261-01A
0 years, female, white, stage:Stage IIIC, dead, 24 days
11659.9
TCGA-61-2092-01A
0 years, female, white, stage:Stage IIIC, alive, 1573 days
11630.3
TCGA-25-1635-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
11594.3
TCGA-24-1847-01A
0 years, female, white, stage:Stage IV, alive, 343 days
11574.5
TCGA-24-1844-01A
0 years, female, white, stage:Stage IIIC, alive, 113 days
11544.7
TCGA-13-0714-01A
0 years, female, white, stage:Stage IV, dead, 189 days
11534.0
TCGA-13-0800-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
11468.7
TCGA-59-2363-01A
0 years, female, asian, stage:Stage IIIA, alive, 165 days
11450.5
TCGA-29-1783-01A
0 years, female, white, stage:Stage IIIC, alive, 220 days
11310.1
TCGA-09-2051-01A
0 years, female, white, stage:Stage IIIC, alive, 1919 days
11274.0
TCGA-23-1113-01A
0 years, female, white, stage:Stage IV, dead, 949 days
11179.5
TCGA-24-1103-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1646 days
11038.4
TCGA-VG-A8LO-01A
0 years, female, black or african american, stage:Stage IV, dead, 24 days
11029.9
TCGA-25-1631-01A
0 years, female, white, stage:Stage IIIC, dead, 9 days
10984.9
TCGA-23-2078-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
10959.1
TCGA-61-2102-01A
0 years, female, white, stage:Stage IIIC, dead, 197 days
10936.3
TCGA-25-2042-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 396 days
10935.2
TCGA-09-1662-01A
0 years, female, white, stage:Stage IV, dead, 2717 days
10915.5
TCGA-13-0888-01A
0 years, female, white, stage:Stage IIIC, dead, 2811 days
10900.4
TCGA-13-A5FT-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 2143 days
10897.3
TCGA-30-1861-01A
0 years, female, white, stage:Stage IIIC, dead, 1058 days
10850.0
TCGA-24-1928-01A
0 years, female, white, stage:Stage IIIC, dead, 336 days
10837.3
TCGA-04-1364-01A
0 years, female, white, stage:Stage IIIC, dead, 1024 days
10806.3
TCGA-57-1583-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 346 days
10774.5
TCGA-09-0367-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IIIC, dead, 547 days
10651.3
TCGA-57-1585-01A
0 years, female, white, stage:Stage IIIC, dead, 53 days
10605.3
TCGA-31-1956-01A
0 years, female, white, stage:Stage IIIB, alive, 1342 days
10592.9
TCGA-61-2088-01A
0 years, female, white, stage:Stage IIIC, alive, 145 days
10521.6
TCGA-24-2280-01A
0 years, female, white, stage:Stage IIIC, alive, 2143 days
10355.4
TCGA-09-1666-01A
0 years, female, white, stage:Stage IIIC, alive, 1752 days
10353.9
TCGA-25-2404-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 883 days
10345.3
TCGA-29-1762-01A
0 years, female, white, stage:Stage IV, dead, 2634 days
10341.5
TCGA-13-1499-01A
0 years, female, white, stage:Stage IIIC, alive, 3500 days
10338.3
TCGA-10-0927-01A
0 years, female, stage:Stage IIIC, dead, 2490 days
10320.4
TCGA-13-0730-01A
0 years, female, white, stage:Stage IIIC, dead, 542 days
10297.6
TCGA-25-1328-01A
0 years, female, white, stage:Stage IIIC, dead, 2009 days
10275.5
TCGA-61-1737-01A
0 years, female, white, stage:Stage IV, alive, 1364 days
10183.7
TCGA-24-1418-01A
0 years, female, white, stage:Stage IIIC, alive, 243 days
10174.0
TCGA-25-1319-01A
0 years, female, white, stage:Stage IIIC, dead, 1977 days
10136.6
TCGA-36-1580-01A
0 years, female, stage:Stage IIIC, dead, 737 days
10126.6
TCGA-13-0911-01A
0 years, female, white, stage:Stage IV, dead, 1355 days
10116.9
TCGA-13-0897-01A
0 years, female, white, stage:Stage IIIC, dead, 2182 days
9980.9
TCGA-24-1563-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1451 days
9925.4
TCGA-36-1581-01A
0 years, female, white, stage:Stage IIC, alive, 751 days
9885.0
TCGA-13-0920-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
9874.9
TCGA-09-0366-01A
0 years, female, white, stage:Stage IIIC, dead, 1757 days
9874.4
TCGA-04-1519-01A
0 years, female, stage:Stage IIIC, alive, 24 days
9863.1
TCGA-24-1427-01A
0 years, female, stage:Stage IIIC, alive, 147 days
9857.9
TCGA-24-1846-01A
0 years, female, stage:Stage IIIC, alive, 133 days
9841.7
TCGA-29-1768-01A
0 years, female, white, stage:Stage IV, dead, 952 days
9816.3
TCGA-24-2254-01A
0 years, female, white, stage:Stage IIIC, dead, 1736 days
9789.0
TCGA-61-2000-01A
0 years, female, white, stage:Stage IIIC, alive, 441 days
9597.1
TCGA-09-2048-01A
0 years, female, white, stage:Stage IIIC, dead, 138 days
9588.0
TCGA-29-1769-01A
0 years, female, white, stage:Stage IIIC, alive, 699 days
9535.4
TCGA-36-1571-01A
0 years, female, white, stage:Stage IIIB, dead, 695 days
9527.2
TCGA-61-2097-01A
0 years, female, white, stage:Stage IIC, alive, 1844 days
9425.7
TCGA-61-1907-01A
0 years, female, white, stage:Stage IIIC, alive, 952 days
9419.9
TCGA-25-2401-01A
0 years, female, white, stage:Stage IIIC, dead, 90 days
9403.1
TCGA-25-2400-01A
0 years, female, white, stage:Stage IIIC, dead, 1278 days
9344.5
TCGA-31-1951-01A
0 years, female, white, stage:Stage IIIC, alive, 684 days
9338.3
TCGA-23-1809-01A
0 years, female, white, stage:Stage IIC, alive, 16 days
9319.8
TCGA-13-1505-01A
0 years, female, white, stage:Stage IIIC, alive, 1998 days
9317.9
TCGA-24-2020-01A
0 years, female, white, stage:Stage IIIC, dead, 4624 days
9296.2
TCGA-OY-A56Q-01A
0 years, female, black or african american, stage:Stage IIA, alive, 576 days
9194.7
TCGA-61-1911-01A
0 years, female, white, stage:Stage IIA, alive, 1293 days
9189.7
TCGA-24-1924-01A
0 years, female, white, stage:Stage IIIC, dead, 919 days
9051.7
TCGA-23-1111-01A
0 years, female, white, stage:Stage IIIC, alive, 98 days
9017.8
TCGA-57-1994-01A
0 years, female, white, stage:'--, alive, 761 days
8990.9
TCGA-29-1710-01A
0 years, female, white, stage:Stage IIIC, dead, 951 days
8943.5
TCGA-61-1733-01A
0 years, female, white, stage:Stage IIIC, alive, 967 days
8813.3
TCGA-13-2060-01A
0 years, female, white, stage:Stage IV, alive, 2369 days
8774.8
TCGA-25-2398-01A
0 years, female, white, stage:Stage IIIC, dead, 1369 days
8716.4
TCGA-61-2002-01A
0 years, female, white, stage:Stage IIIC, alive, 547 days
8630.2
TCGA-20-0987-01A
0 years, female, white, stage:Stage IIIC, dead, 701 days
8619.5
TCGA-61-2110-01A
0 years, female, white, stage:Stage IIIC, dead, 1354 days
8574.1
TCGA-24-2038-01A
0 years, female, white, stage:Stage IIIA, dead, 1354 days
8518.2
TCGA-24-1842-01A
0 years, female, white, stage:Stage IIIC, alive, 253 days
8483.9
TCGA-24-1424-01A
0 years, female, white, stage:Stage IIIC, alive, 183 days
8399.1
TCGA-59-2350-01A
0 years, female, stage:Stage IV, dead, 679 days
8394.6
TCGA-23-1107-01A
0 years, female, white, stage:Stage IV, dead, 9 days
8393.6
TCGA-61-1919-01A
0 years, female, white, stage:Stage IIIC, dead, 1161 days
8333.1
TCGA-61-2098-01A
0 years, female, white, stage:Stage IIIC, alive, 1993 days
8306.8
TCGA-25-1312-01A
0 years, female, white, stage:Stage IV, dead, 31 days
8220.1
TCGA-13-0923-01A
0 years, female, white, stage:Stage IIIC, alive, 2547 days
8169.1
TCGA-25-1626-01A
0 years, female, white, stage:Stage IIIC, dead, 518 days
8167.2
TCGA-25-1623-01A
0 years, female, white, stage:Stage IV, dead, 565 days
8124.1
TCGA-24-1549-01A
0 years, female, white, stage:Stage IIIB, dead, 1721 days
8066.7
TCGA-61-1998-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
8033.7
TCGA-29-1695-01A
0 years, female, white, stage:Stage IIIC, dead, 1229 days
8008.8
TCGA-25-2399-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
7976.5
TCGA-30-1860-01A
0 years, female, white, stage:Stage IIIC, dead, 1366 days
7932.3
TCGA-29-1784-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
7871.0
TCGA-09-1669-01A
0 years, female, white, stage:Stage IIIA, alive, 928 days
7816.5
TCGA-59-A5PD-01A
0 years, female, black or african american, stage:Stage IC, dead, 624 days
7815.2
TCGA-13-0883-01A
0 years, female, white, stage:Stage IIIC, dead, 2097 days
7784.7
TCGA-25-1634-01A
0 years, female, white, stage:Stage IIIC, dead, 1091 days
7777.5
TCGA-24-1550-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
7767.2
TCGA-61-1995-01A
0 years, female, white, stage:Stage IIIC, alive, 61 days
7761.3
TCGA-31-1959-01A
0 years, female, white, stage:Stage IV, alive, 67 days
7678.5
TCGA-25-1628-01A
0 years, female, white, stage:Stage IIIC, dead, 627 days
7672.6
TCGA-24-2024-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1769 days
7628.7
TCGA-24-2033-01A
0 years, female, white, stage:Stage IIIC, dead, 562 days
7514.1
TCGA-04-1341-01A
0 years, female, white, stage:'--, alive, 33 days
7507.1
TCGA-09-0364-01A
0 years, female, white, stage:Stage IIC, dead, 887 days
7419.6
TCGA-30-1862-01A
0 years, female, white, stage:Stage IV, dead, 186 days
7388.5
TCGA-36-1576-01A
0 years, female, stage:Stage IIIC, alive, 915 days
7351.2
TCGA-24-2298-01A
0 years, female, white, stage:Stage IIIC, dead, 1620 days
7323.8
TCGA-61-1741-01A
0 years, female, white, stage:Stage IIIB, dead, 1024 days
7237.0
TCGA-09-2054-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 637 days
7215.3
TCGA-25-2393-01A
0 years, female, white, stage:Stage IIIC, dead, 1157 days
7152.7
TCGA-24-1553-01A
0 years, female, white, stage:Stage IIIB, dead, 1767 days
7039.7
TCGA-59-2348-01A
0 years, female, white, stage:Stage IIIC, alive, 5481 days
7027.1
TCGA-24-1562-01A
0 years, female, white, stage:Stage IIIC, dead, 1384 days
7003.6
TCGA-61-2008-01A
0 years, female, asian, stage:Stage IIC, alive, 932 days
6956.9
TCGA-04-1514-01A
0 years, female, white, stage:Stage IIIA, dead, 1720 days
6906.0
TCGA-24-1434-01A
0 years, female, white, stage:Stage IIIC, dead, 568 days
6895.4
TCGA-25-1317-01A
0 years, female, white, stage:Stage IIIC, dead, 61 days
6892.1
TCGA-04-1350-01A
0 years, female, white, stage:Stage IIIC, dead, 1946 days
6856.4
TCGA-25-1627-01A
0 years, female, white, stage:Stage IIIC, dead, 394 days
6803.2
TCGA-29-1776-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 360 days
6794.2
TCGA-10-0938-01A
0 years, female, white, stage:Stage IIIC, dead, 636 days
6776.7
TCGA-29-1761-01A
0 years, female, asian, stage:Stage IIIC, dead, 528 days
6750.5
TCGA-24-1474-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 676 days
6732.2
TCGA-61-1914-01A
0 years, female, stage:Stage IIIC, alive, 1722 days
6655.0
TCGA-24-1417-01A
0 years, female, white, stage:Stage IV, alive, 238 days
6654.6
TCGA-04-1332-01A
0 years, female, white, stage:Stage IIIC, dead, 1247 days
6643.4
TCGA-61-1728-01A
0 years, female, white, stage:Stage IV, alive, 848 days
6632.9
TCGA-29-1701-01A
0 years, female, white, stage:Stage IIIC, dead, 515 days
6610.1
TCGA-13-1409-01A
0 years, female, white, stage:Stage IIIC, dead, 1742 days
6580.3
TCGA-30-1718-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
6519.8
TCGA-61-1738-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1089 days
6484.7
TCGA-29-1690-01A
0 years, female, white, stage:Stage IIIC, dead, 1448 days
6431.5
TCGA-29-1696-01A
0 years, female, white, stage:Stage IIIC, dead, 1032 days
6367.0
TCGA-36-1569-01A
0 years, female, white, stage:Stage IIIC, alive, 885 days
6344.0
TCGA-13-0924-01A
0 years, female, white, stage:Stage IV, alive, 2614 days
6087.5
TCGA-24-1560-01A
0 years, female, white, stage:Stage IIIC, dead, 1341 days
6072.3
TCGA-30-1891-01A
0 years, female, white, stage:Stage IIIC, dead, 914 days
6051.2
TCGA-29-1766-01A
0 years, female, white, stage:Stage IIIC, dead, 1199 days
6014.0
TCGA-29-1711-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 1053 days
5981.8
TCGA-29-1697-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
5955.5
TCGA-61-2009-01A
0 years, female, white, stage:Stage IIIC, alive, 1212 days
5913.6
TCGA-29-1691-01A
0 years, female, white, stage:Stage IIIC, dead, 1470 days
5867.4
TCGA-23-1022-01A
0 years, female, white, stage:Stage IIIC, dead, 1511 days
5757.7
TCGA-WR-A838-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 304 days
5700.5
TCGA-24-1850-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
5642.2
TCGA-29-1777-01A
0 years, female, white, stage:Stage IIIC, alive, 374 days
5598.5
TCGA-24-1567-01A
0 years, female, white, stage:Stage IIIB, dead, 524 days
5595.5
TCGA-20-1683-01A
0 years, female, white, stage:Stage IIIC, alive, 772 days
5546.7
TCGA-24-1558-01A
0 years, female, white, stage:Stage IIIC, dead, 594 days
5546.3
TCGA-59-2352-01A
0 years, female, white, stage:Stage IIIC, dead, 286 days
5537.4
TCGA-25-1632-01A
0 years, female, white, stage:Stage IV, dead, 1799 days
5477.3
TCGA-29-A5NZ-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1088 days
5410.1
TCGA-29-2425-01A
0 years, female, white, stage:Stage IIIC, alive, 1977 days
5393.4
TCGA-36-1574-01A
0 years, female, asian, stage:Stage IIIC, alive, 686 days
5383.0
TCGA-13-0727-01A
0 years, female, white, stage:Stage IIIC, dead, 462 days
5177.4
TCGA-25-1316-01A
0 years, female, white, stage:Stage IIIC, dead, 1279 days
5102.1
TCGA-61-1721-01A
0 years, female, white, stage:Stage IV, alive, 338 days
5091.0
TCGA-13-1506-01A
0 years, female, white, stage:Stage IIIC, dead, 1039 days
4893.3
TCGA-5X-AA5U-01A
0 years, female, black or african american, stage:Stage IIC, alive, 361 days
4758.3
TCGA-29-1774-01A
0 years, female, white, stage:Stage IIIC, alive, 527 days
4539.0
TCGA-61-2012-01A
0 years, female, white, stage:Stage IIC, alive, 932 days
4293.3
TCGA-25-1877-01A
0 years, female, white, stage:Stage IIIC, dead, 730 days
3886.4
TCGA-29-1703-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1815 days
3797.2
TCGA-13-1507-01A
0 years, female, white, stage:Stage IIIC, dead, 1993 days
3746.5
TCGA-29-1781-01A
0 years, female, white, stage:Stage IIIC, alive, 255 days
3528.0
TCGA-61-1724-01A
0 years, female, white, stage:Stage IIIC, dead, 637 days
3476.8
TCGA-13-0766-01A
0 years, female, white, stage:Stage IIIC, dead, 1725 days
3307.7
TCGA-25-1633-01A
0 years, female, white, stage:Stage IIIC, dead, 1891 days
3157.5
TCGA-24-1544-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 820 days
3123.7
TCGA-20-0991-01A
0 years, female, white, stage:Stage IIB, alive, 797 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MT-CO2 is not prognostic in Ovary Serous Cystadenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11772.9
Number of samples
81
Samples
Sample
Description
TPM
DO46428
0 years, female, NA, stage:IV, alive, 2644 days
40879.9
DO46546
0 years, female, NA, stage:III, dead, 1889 days
30617.4
DO46518
0 years, female, NA, stage:III, alive, 2960 days
27626.0
DO46400
0 years, female, NA, stage:III, dead, 719 days
26485.4
DO46372
0 years, female, NA, stage:III, dead, 1326 days
20555.2
DO46408
0 years, female, NA, stage:III, dead, 489 days
20227.4
DO46493
0 years, female, NA, stage:IV, alive, 839 days
19609.8
DO46458
0 years, female, NA, stage:IV, alive, 3787 days
18907.1
DO46331
0 years, female, NA, stage:III, dead, 612 days
18557.4
DO46438
0 years, female, NA, stage:IV, alive, 2227 days
18482.9
DO46329
0 years, female, NA, stage:III, dead, 1699 days
18091.0
DO46350
0 years, female, NA, stage:III, dead, 886 days
16451.4
DO46360
0 years, female, NA, stage:IV, dead, 1759 days
15692.0
DO46468
0 years, female, NA, stage:III, alive, 2776 days
15686.2
DO46378
0 years, female, NA, stage:III, alive, 843 days
15348.8
DO46396
0 years, female, NA, stage:III, dead, 583 days
15200.0
DO46325
0 years, female, NA, stage:III, dead, 477 days
15088.6
DO46374
0 years, female, NA, stage:III, dead, 1409 days
14940.1
DO46513
0 years, female, NA, stage:IV, dead, 1883 days
14769.5
DO46571
0 years, female, NA, stage:III, dead, 243 days
14512.2
DO46342
0 years, female, NA, stage:III, dead, 1398 days
14320.5
DO46566
0 years, female, NA, stage:III, dead, 673 days
14230.7
DO46364
0 years, female, NA, stage:III, dead, 806 days
13981.9
DO46588
0 years, female, NA, stage:III, dead, 438 days
13829.9
DO46340
0 years, female, NA, stage:III, dead, 616 days
13653.7
DO46336
0 years, female, NA, stage:IV, dead, 664 days
13440.5
DO46327
0 years, female, NA, stage:III, dead, 184 days
12952.4
DO46606
0 years, female, NA, stage:III, alive, 804 days
12857.6
DO46334
0 years, female, NA, stage:III, dead, 496 days
12775.1
DO46344
0 years, female, NA, stage:III, dead, 642 days
12567.0
DO46404
0 years, female, NA, stage:III, dead, 690 days
12316.2
DO46394
0 years, female, NA, stage:IV, dead, 1039 days
12024.4
DO46382
0 years, female, NA, stage:IV, dead, 311 days
11854.2
DO46528
0 years, female, NA, stage:III, alive, 6139 days
11571.0
DO46551
0 years, female, NA, stage:III, dead, 1055 days
11563.2
DO46358
0 years, female, NA, stage:III, dead, 423 days
11467.9
DO46398
0 years, female, NA, stage:III, alive, 437 days
11248.0
DO46328
0 years, female, NA, stage:III, dead, 972 days
11159.7
DO46330
0 years, female, NA, stage:III, dead, 684 days
11135.5
DO46561
0 years, female, NA, stage:III, dead, 195 days
11079.1
DO46354
0 years, female, NA, stage:III, dead, 843 days
10722.8
DO46443
0 years, female, NA, stage:III, dead, 2464 days
10696.7
DO46386
0 years, female, NA, stage:III, dead, 1162 days
10650.0
DO46368
0 years, female, NA, stage:III, dead, 2879 days
10281.4
DO46538
0 years, female, NA, stage:III, dead, 1527 days
10258.3
DO46352
0 years, female, NA, stage:III, dead, 677 days
9907.8
DO46560
0 years, female, NA, stage:IV, dead, 286 days
9900.5
DO46392
0 years, female, NA, stage:III, dead, 628 days
9703.7
DO46412
0 years, female, NA, stage:III, dead, 597 days
9610.2
DO46602
0 years, female, NA, stage:III, dead, 205 days
9534.9
DO46568
0 years, female, NA, stage:III, dead, 320 days
9326.4
DO46533
0 years, female, NA, stage:III, alive, 3667 days
8810.1
DO46390
0 years, female, NA, stage:III, dead, 374 days
8689.9
DO46362
0 years, female, NA, stage:III, dead, 1639 days
8636.2
DO46366
0 years, female, NA, stage:III, dead, 2054 days
8503.3
DO46523
0 years, female, NA, stage:IV, alive, 1873 days
8473.1
DO46436
0 years, female, NA, stage:III, alive, 3193 days
8409.0
DO46463
0 years, female, NA, stage:III, dead, 2451 days
8034.4
DO46576
0 years, female, NA, stage:III, alive, 133 days
8016.7
DO46348
0 years, female, NA, stage:IV, dead, 287 days
7688.3
DO46380
0 years, female, NA, stage:III, dead, 1423 days
7549.3
DO46586
0 years, female, NA, stage:III, dead, 1019 days
7421.5
DO46388
0 years, female, NA, stage:III, dead, 413 days
7244.1
DO46370
0 years, female, NA, stage:III, dead, 1727 days
7130.6
DO46332
0 years, female, NA, stage:III, dead, 689 days
7037.6
DO46432
0 years, female, NA, stage:III, alive, 2218 days
6926.0
DO46376
0 years, female, NA, stage:III, dead, 1430 days
6914.5
DO46346
0 years, female, NA, stage:III, dead, 1187 days
6575.4
DO46326
0 years, female, NA, stage:III, dead, 701 days
6216.6
DO46508
0 years, female, NA, stage:III, dead, 2101 days
6187.4
DO46581
0 years, female, NA, stage:III, dead, 408 days
6180.6
DO46597
0 years, female, NA, stage:III, dead, 393 days
5870.4
DO46384
0 years, female, NA, stage:III, dead, 614 days
5398.2
DO46333
0 years, female, NA, stage:III, dead, 359 days
5322.1
DO46448
0 years, female, NA, stage:III, dead, 654 days
5314.4
DO46402
0 years, female, NA, stage:III, dead, 511 days
5281.5
DO46356
0 years, female, NA, stage:III, dead, 911 days
4010.6
DO46453
0 years, female, NA, stage:III, dead, 3294 days
3699.8
DO46611
0 years, female, NA, stage:III, dead, 734 days
3361.8
DO46591
0 years, female, NA, stage:III, dead, 195 days
3223.9
DO46338
0 years, female, NA, stage:III, dead, 596 days
3130.5
Show allShow less
OVARY SEROUS CYSTADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
108
Samples
Sample ID
Sample type
nRPX
e3ebe010-cd31-4b5d-8fcb-b7103b_D2
Tumor
N/A
1556af7e-c2ae-4fce-9aae-87c459_D1_D2
Normal
N/A
21efd60f-6a31-4b98-9477-16a905_D2
Normal
N/A
b22659b9-e12c-4725-a7db-a833de_D1_D2
Normal
N/A
3946a96c-e0ae-442f-83b4-a9350e_D2
Tumor
N/A
285fed94-1495-448e-879b-b55de9_D2
Tumor
N/A
d109a3c0-350e-47f5-bda0-61899c_D2
Tumor
N/A
a583d3ff-8165-43e9-b764-23b7ef_D1_D2
Normal
N/A
9a7a86d3-bbf2-4d36-941d-c75c03_D1_D2
Tumor
N/A
6e209757-a7f4-45af-b5f3-2ebc02_D2
Normal
N/A
8ed739dd-ae0f-4881-971a-db3cf4_D1_D2
Normal
N/A
ce1e5dfc-2ef1-4633-af93-5ea4d9_D2
Tumor
N/A
91b287fd-eadb-442d-abcd-20b741_D2
Tumor
N/A
a8853382-b726-4ce8-98d5-ca89df_D2
Tumor
N/A
eb3f3494-7057-4afe-b212-e6e9a3_D2
Tumor
N/A
2f901c90-617e-46da-9fac-d68369_D2
Tumor
N/A
41d0619e-b299-42e2-ac32-29e784_D2
Tumor
N/A
efc971f8-54c5-4531-a792-705ecf_D2
Tumor
N/A
1de8d3d8-fc0e-4be0-8aa7-127c7b_D2
Tumor
N/A
05387aad-2a1f-42c2-8d6f-950598_D3
Tumor
N/A
558333b0-ea23-4303-9e3c-4932b1_D2
Tumor
N/A
d38f40fb-dd78-43b2-8b7b-4b6977_D2
Tumor
N/A
1c9145ad-1981-4871-aa7e-8b11de_D2
Tumor
N/A
318d53c3-216b-4de1-a098-77d6dd_D2
Tumor
N/A
3a380577-c134-47ba-a1ce-988d7c_D2
Tumor
N/A
7d953d1d-84b6-4ecd-b1d7-1ed865_D2
Tumor
N/A
256ac9f5-1e19-44b4-92fb-fef3fc_D2
Tumor
N/A
46c73531-f531-4ec3-97fe-b39d9d_D2
Tumor
N/A
a03d1103-b809-42c4-ad5c-5aff58_D2
Tumor
N/A
6530147a-efe9-4df6-ac2f-03ece3_D2
Tumor
N/A
0745488e-0bfb-4d1f-8228-dedf76_D1_D2
Normal
N/A
e23eb014-69c1-460a-b9d4-9786c8_D2
Normal
N/A
7069e990-4a4e-4984-a66d-4d835a_D2
Tumor
N/A
627e6e36-3dca-4ee5-9755-6f3510_D2
Tumor
N/A
3e746bea-ed68-40e6-b348-6ddf08_D2
Normal
N/A
1772e913-f62e-446a-8cf3-720348_D2
Tumor
N/A
e9d416e7-f661-400a-896e-388545_D2
Tumor
N/A
e6850782-fd2a-4c53-b682-1852fe_D2
Tumor
N/A
79b60f32-6cca-4cb6-9a1e-22a3ac_D2
Tumor
N/A
3dcf8b3c-c0c5-4dfa-9543-5d30fb_D2
Tumor
N/A
8e17b45e-6a06-4e4e-913d-7b1edb_D2
Tumor
N/A
f6c215ea-5381-4521-bb61-be8e97_D2
Tumor
N/A
2ed8beb2-bc63-4bad-b5fe-1916a0_D2
Tumor
N/A
2563cb02-d58a-4286-8634-7502cd_D2
Tumor
N/A
50997c44-1c8b-4d34-b535-4a6cc2_D2
Tumor
N/A
42d860a3-8a0c-4c44-a09a-9ad8cf_D2
Tumor
N/A
2dc28da8-7ff1-4b9b-b5bd-17cc25_D2
Tumor
N/A
1abbcb28-f221-4cd4-8c01-37b9bb_D1_D2
Normal
N/A
69d552be-7cb2-4bb4-b602-a27b3e_D2
Tumor
N/A
51a4ce2f-4166-4c6b-a7e0-942d0a_D2
Tumor
N/A
10c2d629-0287-4511-ac25-f29031_D2
Tumor
N/A
2224c03f-b7b1-4368-887e-2b4cdf_D2
Tumor
N/A
2b73e01c-347a-4dae-a71d-752aeb_D2
Normal
N/A
76e77c6b-c80e-4391-bdbb-e1dcea_D2
Tumor
N/A
e7b656bf-3c34-4ba1-bdf3-c7eefe_D2
Tumor
N/A
eb0a53df-7620-4024-8d2d-051142_D2
Tumor
N/A
80873a0c-1f40-4d51-bab1-3f2071_D2
Tumor
N/A
340a3769-3031-41ae-bb08-a2f696_D2
Normal
N/A
2433b136-fc7b-4cea-b958-bc6efb_D2
Tumor
N/A
994f9b8e-46cb-413f-8ec8-2c2fed_D2
Normal
N/A
2115808b-6a0d-49bc-a8d7-b83bde_D2
Tumor
N/A
5ea22f5e-307b-491d-801f-8b7fa6_D2
Tumor
N/A
af95e2c6-25c4-4ab8-bf06-3e15ff_D2
Tumor
N/A
49bd51fe-48a1-4828-b66e-b30c38_D2
Tumor
N/A
08296da7-70ea-44df-8646-09f2cc_D2
Tumor
N/A
31c15e30-21d4-4843-bd4a-9cd0d8_D2
Normal
N/A
685ec3c2-e67a-40d3-9eb3-aa01c9_D1_D2
Normal
N/A
51c1c79e-5a8e-4b0a-bf92-1c0cab_D2
Tumor
N/A
3fbf076a-824b-4eac-b6dc-bf5e59_D2
Normal
N/A
1b2ab076-c72f-4bbe-b9f9-657d24_D2
Tumor
N/A
2b4ce90c-8036-4207-ac3e-54a76f_D2
Tumor
N/A
c17b0ff9-9057-4848-a0cc-abb25f_D2
Tumor
N/A
52c064a7-78d9-4a1a-85b4-27c6d1_D2
Tumor
N/A
15524912-685a-47ce-a824-567848_D2
Tumor
N/A
bd266bdd-12e4-42cb-9c49-911bfc_D2
Tumor
N/A
927f0958-db5a-4bc5-92b7-2a3695_D2
Tumor
N/A
d4791079-c826-4fc7-9d9b-ee20ba_D2
Tumor
N/A
35a345a4-e954-4c81-ae3f-7797cd_D2
Tumor
N/A
0cc794c3-5bf5-4621-b238-58a0f6_D2
Tumor
N/A
3490835c-c004-45ed-91f3-7c206f_D2
Tumor
N/A
a3a26070-fb84-406a-8280-d555e6_D2
Normal
N/A
161317f3-1a39-438e-af45-cd2502_D2
Tumor
N/A
fe83e13f-9754-403b-8f74-d6caf8_D2
Tumor
N/A
1db5574d-aca7-403c-8100-6e705f_D2
Normal
N/A
4ccb249a-6722-491e-97e9-e3b4e7_D2
Tumor
N/A
9b90eb78-2f50-4aeb-b010-d642f9_D2
Tumor
N/A
b9c1f22e-61f7-45ed-b3b4-5094c7_D2
Normal
N/A
8d78194e-fbef-4819-a7b5-b73ae9_D2
Tumor
N/A
7edfd606-4bee-4529-9fec-1ca7f0_D2
Normal
N/A
3d3e1888-d67e-4c69-ba83-112d0f_D2
Tumor
N/A
28d0abdb-f682-4bd3-9425-a9c508_D2
Tumor
N/A
61f76fe6-a1c6-41b8-bdc2-2f9209_D2
Normal
N/A
6319b36b-533c-4e86-8e12-80552e_D3
Tumor
N/A
0c87932d-b6fd-4eb5-b86a-a34d07_D2
Tumor
N/A
7c7ce2d7-6c8a-424e-8e6c-d14ad1_D2
Tumor
N/A
092af714-b97a-457c-b0e9-8c20e8_D2
Normal
N/A
62f5840e-6cd7-4200-b651-645e53_D2
Tumor
N/A
74a45e5a-a35a-4c60-a4b4-f3f5ea_D2
Tumor
N/A
347e379b-77c0-4dd3-aa25-18c9d1_D2
Tumor
N/A
5c3971ee-87c7-4dff-b66e-f18892_D2
Tumor
N/A
cfd76f9a-ce60-4ec7-8e6b-a8fc31_D3
Tumor
N/A
27f3ca2d-a86f-479d-8e7e-5307c7_D2
Tumor
N/A
a65d8e76-640f-4341-a561-afbb57_D2
Normal
N/A
fbb41c94-aabd-49cc-90b2-882c3e_D2
Tumor
N/A
1a10c200-3895-4648-b951-94f99f_D2
Tumor
N/A
9e0d47e0-f633-468b-b82b-4d752d_D2
Tumor
N/A
8234f8ea-bdbd-45b0-bd0b-16f1e7_D2
Tumor
N/A
9c8e78bf-b03e-4ba0-9909-5ff070_D2
Tumor
N/A
Show allShow less
OVARIAN CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.