HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:35.3 nTPM
HPA Brain:32.4 nTPM
GTEx:35.3 nTPM
FANTOM5:41.6 Scaled Tags Per Million
Pig:27.7 nTPM
Mouse:0.0 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA060452Antibody HPA062492
Glial cells Not detectedNot detected
Neuronal cells MediumLow



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 32.4
Sample id Sample description nTPM
Hippocampus
nTPM: 29.9
1898 Male, age 80, left hemisphere 31.9
2529 Female, age 94, left hemisphere 31.5
2621 Female, age 67, right hemisphere 30.1
1855 Male, age 76, left hemisphere 29.5
2148 Female, age 91, left hemisphere 28.5
1911 Female, age 85, right hemisphere 27.7
Dentate gyrus
nTPM: 29.9
2530 Female, age 94, left hemisphere 42.0
2010 Male, age 76, both hemispheres 32.4
2246 Female, age 85, both hemispheres 28.3
2531 Female, age 67, both hemispheres 28.3
1927 Female, age 91, both hemispheres 24.8
2528 Male, age 74, both hemispheres 24.0
Entorhinal gyrus
nTPM: 32.4
2686 Male, age 75, right hemisphere 44.7
2117 Female, age 91, right hemisphere 32.7
2764 Male, age 80, right hemisphere 30.8
1787 Male, age 76, left hemisphere 29.8
1938 Female, age 85, left hemisphere 28.5
2613 Female, age 94, left hemisphere 28.2
Hippocampus, CA1
nTPM: 26.8
2749 Male, age 80, left hemisphere 29.5
1873 Female, age 85, both hemispheres 28.3
2082 Female, age 91, right hemisphere 26.5
2045 Male, age 76, both hemispheres 25.1
2527 Male, age 74, both hemispheres 24.8
Hippocampus, CA2
nTPM: 29.1
2437 Female, age 94, left hemisphere 34.3
1963 Male, age 80, left hemisphere 31.5
1940 Female, age 85, left hemisphere 29.6
1892 Male, age 76, both hemispheres 27.6
2113 Female, age 91, right hemisphere 27.1
2249 Male, age 74, both hemispheres 24.5
Hippocampus, CA3
nTPM: 25.7
1891 Female, age 85, both hemispheres 32.5
1867 Male, age 76, both hemispheres 27.6
2861 Female, age 67, both hemispheres 27.5
2137 Male, age 80, left hemisphere 23.7
2620 Female, age 94, left hemisphere 23.1
2436 Male, age 74, both hemispheres 19.5
Parahippocampal cortex
nTPM: 29.6
2622 Female, age 67, right hemisphere 33.8
2692 Male, age 74, both hemispheres 32.5
2018 Male, age 76, both hemispheres 31.2
2532 Female, age 72, left hemisphere 31.2
1850 Male, age 80, both hemispheres 30.2
2245 Female, age 91, both hemispheres 29.7
1990 Female, age 91, right hemisphere 29.0
1933 Female, age 85, both hemispheres 28.5
2250 Female, age 67, right hemisphere 25.0
2693 Female, age 94, both hemispheres 24.8
Perirhinal gyrus
nTPM: 27.4
1841 Female, age 85, right hemisphere 29.5
1847 Female, age 91, left hemisphere 28.6
1794 Male, age 80, right hemisphere 28.4
2848 Male, age 76, right hemisphere 28.0
2521 Female, age 94, right hemisphere 22.2
Subiculum
nTPM: 31.9
2438 Female, age 94, left hemisphere 38.7
2042 Male, age 76, both hemispheres 34.4
1901 Male, age 80, both hemispheres 33.3
1977 Female, age 85, both hemispheres 30.1
2619 Male, age 74, both hemispheres 27.4
2729 Female, age 91, right hemisphere 27.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 35.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.3
Samples: 197

Max nTPM: 97.4
Min nTPM: 13.9
Std nTPM: 13.3
Median nTPM: 32.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 97.4
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 94.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 84.3
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 75.8
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 74.7
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 65.5
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 64.2
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 63.0
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 63.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 62.3
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 59.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 41.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 41.6
FF:10169-103B7 60 years, female 43.6
FF:10153-102I9 76 years, female 39.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 27.7
Pig sample Sample description nTPM
Subiculum
nTPM: 27.7
Samples: 4

Max nTPM: 31.2
Min nTPM: 23.5
Sample A Female 31.2
Sample B Female 27.1
Sample C Male 29.1
Sample D Male 23.5
Dorsal hippocampus
nTPM: 27.4
Samples: 4

Max nTPM: 31.9
Min nTPM: 17.9
Sample A Female 31.9
Sample B Female 28.4
Sample C Male 31.2
Sample D Male 17.9
Entorhinal cortex
nTPM: 23.2
Samples: 4

Max nTPM: 25.7
Min nTPM: 21.1
Sample A Female 22.3
Sample B Female 23.8
Sample C Male 25.7
Sample D Male 21.1
Ventral hippocampus
nTPM: 25.9
Samples: 4

Max nTPM: 32.4
Min nTPM: 20.1
Sample A Female 22.3
Sample B Female 20.1
Sample C Male 32.4
Sample D Male 28.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 0.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 13.1
Samples: 4

Max nTPM: 14.6
Min nTPM: 10.6
Sample A Male 13.2
Sample B Male 13.9
Sample C Female 14.6
Sample D Female 10.6
Hippocampal formation
nTPM: 14.2
Samples: 4

Max nTPM: 17.6
Min nTPM: 12.4
Sample A Male 17.6
Sample B Male 12.4
Sample C Female 14.1
Sample D Female 12.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
75828199 Antisense, RP_060601_01_G11, Mouse strain C57BL/6J (56 days, male) 0.4
69116423 Antisense, RP_050317_02_F05, Mouse strain C57BL/6J (56 days, male) 0.0
Hippocampal formation
Expression energy: 0.4
75828199 Antisense, RP_060601_01_G11, Mouse strain C57BL/6J (56 days, male) 0.4
69116423 Antisense, RP_050317_02_F05, Mouse strain C57BL/6J (56 days, male) 0.0

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