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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
36.5
nTPM
HPA Brain:
44.0
nTPM
GTEx:
36.5
nTPM
FANTOM5:
39.4
Scaled Tags Per Million
Pig:
21.4
nTPM
Mouse:
0.0
nTPM
Allen mouse:
0.4
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
44.0
Sample id
Sample description
nTPM
Amygdala nTPM: 37.0
2695
Female, age 67, right hemisphere
53.1
2814
Male, age 76, right hemisphere
39.9
2514
Male, age 75, right hemisphere
33.0
1987
Female, age 91, left hemisphere
30.7
2517
Female, age 94, left hemisphere
28.2
Basal amygdala nTPM: 36.1
2827
Female, age 67, right hemisphere
61.5
2609
Male, age 75, right hemisphere
37.2
2685
Female, age 94, left hemisphere
33.2
1955
Male, age 76, both hemispheres
32.8
2110
Male, age 80, left hemisphere
27.4
2243
Female, age 91, right hemisphere
24.3
Central amygdala nTPM: 41.1
2826
Female, age 94, left hemisphere
68.7
2515
Male, age 75, right hemisphere
39.3
1905
Male, age 76, both hemispheres
37.3
2701
Female, age 91, right hemisphere
31.7
2239
Male, age 80, left hemisphere
28.2
Corticomedial amygdala nTPM: 29.1
2535
Female, age 67, right hemisphere
38.0
2428
Male, age 75, right hemisphere
35.8
2240
Male, age 76, both hemispheres
33.1
2429
Female, age 94, left hemisphere
23.5
2829
Male, age 80, left hemisphere
23.4
2242
Female, age 91, right hemisphere
20.9
Lateral amygdala nTPM: 44.0
2830
Female, age 67, right hemisphere
80.1
2516
Male, age 75, right hemisphere
44.3
2534
Female, age 94, left hemisphere
44.2
1883
Male, age 76, both hemispheres
34.5
2256
Male, age 80, left hemisphere
33.1
2255
Female, age 91, right hemisphere
27.9
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
36.5
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 36.5
Samples: 152
Max nTPM: 92.4
Min nTPM: 9.9
Std nTPM: 15.1
Median nTPM: 32.2
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
92.4
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
89.8
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
86.3
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
79.0
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
76.1
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
74.0
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
72.0
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
70.5
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
65.5
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
65.4
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
64.2
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
63.7
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
63.7
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
62.7
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
60.3
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
57.2
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
55.0
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
54.4
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
54.1
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
53.9
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
53.0
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
52.8
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
51.8
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
50.4
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
50.2
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
50.1
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
49.7
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
48.9
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
48.6
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
47.6
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
46.3
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
46.1
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
45.2
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
43.6
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
43.2
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
41.4
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
40.9
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
40.1
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
39.5
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
39.5
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
39.2
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
39.0
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
39.0
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
39.0
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
38.4
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
38.0
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
37.9
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
37.8
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
37.5
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
37.4
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
37.4
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
37.3
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
36.9
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
36.2
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
36.2
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
35.8
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
35.7
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
35.6
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
35.5
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
35.4
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
35.3
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
34.4
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
34.3
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
33.8
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
33.8
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
33.8
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
33.4
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
33.4
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
33.2
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
33.0
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
32.7
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
32.6
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
32.6
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
32.5
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
32.3
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
32.2
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
32.1
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
32.1
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
32.0
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
31.9
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
31.9
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
31.8
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
31.8
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
31.7
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
30.7
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
30.6
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
30.5
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
30.4
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
30.1
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
30.0
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
30.0
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
29.9
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
29.8
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
29.7
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
29.6
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
29.5
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
29.5
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
29.4
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
29.4
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
29.1
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
29.0
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
28.3
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
28.2
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
28.1
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
27.9
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
27.8
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
27.8
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
27.7
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
27.7
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
27.4
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
27.3
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
27.2
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
27.2
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
26.5
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
26.3
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
25.8
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
25.6
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
25.6
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
25.5
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
25.2
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
25.2
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
25.2
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
25.0
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
24.8
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
24.0
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
23.9
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
23.9
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
23.9
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
23.8
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
23.8
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
23.7
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
23.0
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
23.0
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
22.9
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
22.7
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
22.7
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
22.6
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
22.3
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
22.1
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
22.0
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
21.8
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
21.8
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
21.7
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
21.0
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
20.5
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
20.4
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
20.1
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
20.1
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
19.9
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
19.3
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
19.0
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
9.9
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
0.0
Mouse sample
Sample description
nTPM
Amygdala nTPM: 15.6
Samples: 4
Max nTPM: 17.9
Min nTPM: 13.9
Sample A
Male
14.7
Sample B
Male
16.0
Sample C
Female
13.9
Sample D
Female
17.9
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.