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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
S100A6 is not prognostic in Ovary Serous Cystadenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
2026.1
Number of samples
349
Samples
Sample
Description
TPM
TCGA-29-1693-01A
0 years, female, white, stage:Stage IIIC, alive, 3096 days
27329.5
TCGA-13-0726-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
26167.8
TCGA-13-0897-01A
0 years, female, white, stage:Stage IIIC, dead, 2182 days
18881.2
TCGA-61-1911-01A
0 years, female, white, stage:Stage IIA, alive, 1293 days
13039.1
TCGA-29-1711-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 1053 days
11574.1
TCGA-29-1690-01A
0 years, female, white, stage:Stage IIIC, dead, 1448 days
11486.6
TCGA-29-1696-01A
0 years, female, white, stage:Stage IIIC, dead, 1032 days
10451.6
TCGA-20-0987-01A
0 years, female, white, stage:Stage IIIC, dead, 701 days
10092.7
TCGA-30-1857-01A
0 years, female, white, stage:Stage IV, dead, 8 days
7620.5
TCGA-04-1651-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
7079.5
TCGA-24-0966-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 232 days
6925.9
TCGA-36-1574-01A
0 years, female, asian, stage:Stage IIIC, alive, 686 days
6561.9
TCGA-13-0797-01A
0 years, female, white, stage:Stage IIIC, alive, 2121 days
6555.6
TCGA-24-2023-01A
0 years, female, white, stage:Stage IIIA, dead, 1364 days
5861.9
TCGA-13-0891-01A
0 years, female, white, stage:Stage IV, dead, 3128 days
5758.6
TCGA-13-1489-01A
0 years, female, white, stage:Stage IIIC, dead, 2553 days
5615.1
TCGA-29-1710-01A
0 years, female, white, stage:Stage IIIC, dead, 951 days
5497.8
TCGA-24-1847-01A
0 years, female, white, stage:Stage IV, alive, 343 days
5465.8
TCGA-31-1944-01A
0 years, female, white, stage:Stage IIIC, alive, 1386 days
5117.9
TCGA-23-1107-01A
0 years, female, white, stage:Stage IV, dead, 9 days
5091.5
TCGA-13-1485-01A
0 years, female, white, stage:Stage IV, dead, 629 days
4964.0
TCGA-24-1557-01A
0 years, female, white, stage:Stage IIIC, dead, 1213 days
4959.1
TCGA-29-2428-01A
0 years, female, white, stage:Stage IIIC, alive, 1372 days
4941.7
TCGA-29-1769-01A
0 years, female, white, stage:Stage IIIC, alive, 699 days
4877.8
TCGA-29-1785-01A
0 years, female, white, stage:Stage IIIC, dead, 1104 days
4816.4
TCGA-24-1924-01A
0 years, female, white, stage:Stage IIIC, dead, 919 days
4790.5
TCGA-13-1495-01A
0 years, female, white, stage:Stage IIIC, dead, 2749 days
4621.4
TCGA-13-1405-01A
0 years, female, white, stage:Stage IV, dead, 868 days
4599.7
TCGA-30-1718-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
4561.5
TCGA-04-1338-01A
0 years, female, white, stage:Stage IIIC, alive, 1418 days
4487.5
TCGA-24-1104-01A
0 years, female, white, stage:Stage IV, dead, 1933 days
4449.3
TCGA-25-2409-01A
0 years, female, white, stage:Stage IV, dead, 821 days
4404.7
TCGA-29-1694-01A
0 years, female, white, stage:Stage IIIC, dead, 1187 days
4373.9
TCGA-23-1023-01A
0 years, female, white, stage:Stage IIIC, alive, 1233 days
4174.7
TCGA-57-1584-01A
0 years, female, white, stage:Stage IIIC, alive, 643 days
4162.0
TCGA-13-0765-01A
0 years, female, white, stage:Stage IIIC, dead, 1389 days
4123.2
TCGA-13-0911-01A
0 years, female, white, stage:Stage IV, dead, 1355 days
4063.9
TCGA-25-1326-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
4037.1
TCGA-09-0367-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IIIC, dead, 547 days
4009.8
TCGA-59-2348-01A
0 years, female, white, stage:Stage IIIC, alive, 5481 days
4006.4
TCGA-61-2009-01A
0 years, female, white, stage:Stage IIIC, alive, 1212 days
3966.6
TCGA-29-1770-01A
0 years, female, white, stage:Stage IIIC, alive, 741 days
3816.4
TCGA-25-1627-01A
0 years, female, white, stage:Stage IIIC, dead, 394 days
3789.7
TCGA-04-1356-01A
0 years, female, white, stage:Stage IIC, dead, 1499 days
3754.2
TCGA-29-1777-01A
0 years, female, white, stage:Stage IIIC, alive, 374 days
3749.7
TCGA-24-1549-01A
0 years, female, white, stage:Stage IIIB, dead, 1721 days
3741.0
TCGA-36-1568-01A
0 years, female, stage:Stage IIIC, alive, 875 days
3698.5
TCGA-23-1111-01A
0 years, female, white, stage:Stage IIIC, alive, 98 days
3641.7
TCGA-13-0924-01A
0 years, female, white, stage:Stage IV, alive, 2614 days
3625.5
TCGA-30-1892-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
3594.0
TCGA-13-0795-01A
0 years, female, white, stage:Stage IIIC, dead, 619 days
3401.6
TCGA-59-2355-01A
0 years, female, white, stage:Stage IV, dead, 65 days
3316.7
TCGA-30-1714-01A
0 years, female, white, stage:Stage IV, dead, 1158 days
3309.9
TCGA-04-1536-01A
0 years, female, black or african american, stage:Stage IV, dead, 885 days
3283.1
TCGA-61-2101-01A
0 years, female, white, stage:Stage IIIC, dead, 1688 days
3131.8
TCGA-20-1686-01A
0 years, female, white, stage:Stage IIIC, alive, 89 days
3088.5
TCGA-24-2026-01A
0 years, female, white, stage:Stage IIIC, dead, 1059 days
3034.7
TCGA-13-0887-01A
0 years, female, white, stage:Stage IIIC, dead, 2028 days
3026.6
TCGA-24-1930-01A
0 years, female, white, stage:Stage IIIC, dead, 2467 days
2949.6
TCGA-24-1103-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1646 days
2934.0
TCGA-25-2404-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 883 days
2916.6
TCGA-23-1120-01A
0 years, female, white, stage:Stage IIIC, alive, 130 days
2912.1
TCGA-59-2354-01A
0 years, female, white, stage:Stage IIIC, dead, 1046 days
2909.0
TCGA-24-2035-01A
0 years, female, white, stage:Stage IIIC, dead, 857 days
2876.2
TCGA-20-1687-01A
0 years, female, white, stage:Stage IV, alive, 81 days
2857.9
TCGA-24-1844-01A
0 years, female, white, stage:Stage IIIC, alive, 113 days
2808.2
TCGA-04-1343-01A
0 years, female, white, stage:Stage IV, dead, 361 days
2787.2
TCGA-30-1866-01A
0 years, female, white, stage:Stage IV, dead, 1114 days
2781.9
TCGA-24-1428-01A
0 years, female, white, stage:Stage IIIC, alive, 529 days
2781.8
TCGA-25-1631-01A
0 years, female, white, stage:Stage IIIC, dead, 9 days
2747.4
TCGA-13-1507-01A
0 years, female, white, stage:Stage IIIC, dead, 1993 days
2737.2
TCGA-13-1411-01A
0 years, female, white, stage:Stage IIIC, dead, 531 days
2695.0
TCGA-13-0762-01A
0 years, female, white, stage:Stage IIIC, alive, 3400 days
2666.5
TCGA-29-1761-01A
0 years, female, asian, stage:Stage IIIC, dead, 528 days
2644.3
TCGA-36-1580-01A
0 years, female, stage:Stage IIIC, dead, 737 days
2590.8
TCGA-31-1956-01A
0 years, female, white, stage:Stage IIIB, alive, 1342 days
2537.6
TCGA-13-0804-01A
0 years, female, white, stage:Stage IIIC, dead, 1073 days
2498.0
TCGA-23-2084-01A
0 years, female, white, stage:Stage IV, dead, 1516 days
2484.5
TCGA-09-2051-01A
0 years, female, white, stage:Stage IIIC, alive, 1919 days
2484.5
TCGA-31-1950-01A
0 years, female, white, stage:Stage IIIC, alive, 571 days
2472.9
TCGA-25-1329-01A
0 years, female, white, stage:Stage IIIC, dead, 457 days
2438.0
TCGA-09-0366-01A
0 years, female, white, stage:Stage IIIC, dead, 1757 days
2416.9
TCGA-29-1705-01A
0 years, female, white, stage:Stage IIIC, dead, 555 days
2416.7
TCGA-13-0720-01A
0 years, female, white, stage:Stage IIIC, dead, 1355 days
2400.2
TCGA-13-1477-01A
0 years, female, white, stage:Stage IV, dead, 1662 days
2385.4
TCGA-61-2012-01A
0 years, female, white, stage:Stage IIC, alive, 932 days
2335.2
TCGA-04-1362-01A
0 years, female, white, stage:Stage IIC, dead, 1348 days
2333.4
TCGA-29-1766-01A
0 years, female, white, stage:Stage IIIC, dead, 1199 days
2316.5
TCGA-23-1119-01A
0 years, female, white, stage:Stage IIIC, alive, 3953 days
2300.1
TCGA-24-1431-01A
0 years, female, white, stage:Stage IIIC, dead, 583 days
2281.2
TCGA-59-A5PD-01A
0 years, female, black or african american, stage:Stage IC, dead, 624 days
2255.8
TCGA-13-1511-01A
0 years, female, asian, stage:Stage IV, dead, 1650 days
2245.0
TCGA-13-1509-01A
0 years, female, white, stage:Stage IV, alive, 2438 days
2223.5
TCGA-24-1563-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1451 days
2207.4
TCGA-13-0885-01A
0 years, female, white, stage:Stage IIIC, alive, 3388 days
2190.7
TCGA-13-1512-01A
0 years, female, white, stage:Stage IIIC, alive, 442 days
2150.5
TCGA-25-1630-01A
0 years, female, white, stage:Stage IIIC, dead, 1162 days
2138.4
TCGA-13-1488-01A
0 years, female, white, stage:Stage IV, dead, 2154 days
2121.2
TCGA-31-1953-01A
0 years, female, asian, stage:Stage IIIC, alive, 204 days
2090.7
TCGA-13-1483-01A
0 years, female, white, stage:Stage IIIC, dead, 895 days
2084.1
TCGA-24-1417-01A
0 years, female, white, stage:Stage IV, alive, 238 days
2083.1
TCGA-29-1768-01A
0 years, female, white, stage:Stage IV, dead, 952 days
2075.6
TCGA-57-1994-01A
0 years, female, white, stage:'--, alive, 761 days
2050.6
TCGA-13-1498-01A
0 years, female, white, stage:Stage IIIC, dead, 2012 days
2034.3
TCGA-23-1027-01A
0 years, female, white, stage:Stage IIIC, dead, 976 days
2027.3
TCGA-61-2002-01A
0 years, female, white, stage:Stage IIIC, alive, 547 days
2026.3
TCGA-30-1861-01A
0 years, female, white, stage:Stage IIIC, dead, 1058 days
2024.6
TCGA-24-1435-01A
0 years, female, white, stage:Stage IIIC, dead, 1324 days
2022.7
TCGA-25-2399-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
2008.1
TCGA-25-1635-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
2006.2
TCGA-20-1683-01A
0 years, female, white, stage:Stage IIIC, alive, 772 days
2002.1
TCGA-24-2036-01A
0 years, female, white, stage:Stage IIIA, dead, 1947 days
1973.7
TCGA-10-0937-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
1965.0
TCGA-23-1118-01A
0 years, female, white, stage:Stage IIIC, alive, 2616 days
1950.3
TCGA-24-2024-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1769 days
1947.3
TCGA-24-1565-01A
0 years, female, white, stage:Stage IIIC, dead, 312 days
1941.3
TCGA-57-1585-01A
0 years, female, white, stage:Stage IIIC, dead, 53 days
1930.2
TCGA-09-2045-01A
0 years, female, asian, stage:Stage IV, dead, 1069 days
1928.5
TCGA-25-1318-01A
0 years, female, white, stage:Stage IIIC, dead, 1064 days
1927.1
TCGA-24-1842-01A
0 years, female, white, stage:Stage IIIC, alive, 253 days
1924.4
TCGA-23-1028-01A
0 years, female, white, stage:Stage IIIC, alive, 1503 days
1922.4
TCGA-23-2078-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
1890.5
TCGA-61-2092-01A
0 years, female, white, stage:Stage IIIC, alive, 1573 days
1889.6
TCGA-09-1673-01A
0 years, female, white, stage:Stage IV, alive, 92 days
1876.8
TCGA-61-1919-01A
0 years, female, white, stage:Stage IIIC, dead, 1161 days
1859.7
TCGA-24-2298-01A
0 years, female, white, stage:Stage IIIC, dead, 1620 days
1858.0
TCGA-29-1781-01A
0 years, female, white, stage:Stage IIIC, alive, 255 days
1850.9
TCGA-61-1724-01A
0 years, female, white, stage:Stage IIIC, dead, 637 days
1839.1
TCGA-30-1891-01A
0 years, female, white, stage:Stage IIIC, dead, 914 days
1831.4
TCGA-04-1341-01A
0 years, female, white, stage:'--, alive, 33 days
1797.3
TCGA-24-1845-01A
0 years, female, white, stage:Stage IIIC, alive, 116 days
1783.6
TCGA-23-1122-01A
0 years, female, white, stage:Stage IIIC, dead, 1189 days
1778.2
TCGA-61-1728-01A
0 years, female, white, stage:Stage IV, alive, 848 days
1765.1
TCGA-24-1422-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 23 days
1756.9
TCGA-24-2038-01A
0 years, female, white, stage:Stage IIIA, dead, 1354 days
1729.4
TCGA-13-1501-01A
0 years, female, white, stage:Stage IV, dead, 1314 days
1725.5
TCGA-13-1510-01A
0 years, female, white, stage:Stage IIIC, dead, 1359 days
1686.4
TCGA-13-1496-01A
0 years, female, white, stage:Stage IIIC, dead, 129 days
1671.7
TCGA-61-2113-01A
0 years, female, white, stage:Stage IIC, dead, 676 days
1653.5
TCGA-24-1546-01A
0 years, female, white, stage:Stage IIIC, dead, 1955 days
1650.4
TCGA-24-1416-01A
0 years, female, white, stage:Stage IV, alive, 194 days
1638.9
TCGA-24-1471-01A
0 years, female, white, stage:Stage IIIC, alive, 36 days
1634.1
TCGA-31-1946-01A
0 years, female, stage:Stage IIIC, alive, 918 days
1631.3
TCGA-61-1737-01A
0 years, female, white, stage:Stage IV, alive, 1364 days
1610.2
TCGA-13-0725-01A
0 years, female, white, stage:Stage IIIC, dead, 377 days
1601.6
TCGA-29-2427-01A
0 years, female, white, stage:Stage IIIC, alive, 1900 days
1600.9
TCGA-57-1993-01A
0 years, female, white, stage:Stage IIIC, alive, 763 days
1585.8
TCGA-61-2003-01A
0 years, female, white, stage:Stage IIIC, alive, 122 days
1582.9
TCGA-VG-A8LO-01A
0 years, female, black or african american, stage:Stage IV, dead, 24 days
1578.1
TCGA-61-2008-01A
0 years, female, asian, stage:Stage IIC, alive, 932 days
1543.8
TCGA-24-1928-01A
0 years, female, white, stage:Stage IIIC, dead, 336 days
1533.4
TCGA-24-2297-01A
0 years, female, white, stage:Stage IIIC, dead, 1699 days
1526.1
TCGA-24-0979-01A
0 years, female, white, stage:Stage IV, dead, 1264 days
1524.2
TCGA-23-1113-01A
0 years, female, white, stage:Stage IV, dead, 949 days
1500.2
TCGA-36-1576-01A
0 years, female, stage:Stage IIIC, alive, 915 days
1471.0
TCGA-29-1691-01A
0 years, female, white, stage:Stage IIIC, dead, 1470 days
1457.2
TCGA-29-1776-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 360 days
1439.0
TCGA-36-1569-01A
0 years, female, white, stage:Stage IIIC, alive, 885 days
1431.7
TCGA-04-1542-01A
0 years, female, white, stage:Stage IIIB, dead, 2561 days
1428.9
TCGA-24-1562-01A
0 years, female, white, stage:Stage IIIC, dead, 1384 days
1423.8
TCGA-23-1116-01A
0 years, female, white, stage:Stage IIIC, dead, 592 days
1418.0
TCGA-13-0883-01A
0 years, female, white, stage:Stage IIIC, dead, 2097 days
1413.5
TCGA-25-2042-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 396 days
1397.8
TCGA-20-1682-01A
0 years, female, white, stage:Stage IIIC, alive, 837 days
1387.0
TCGA-61-1918-01A
0 years, female, white, stage:Stage IV, dead, 479 days
1377.7
TCGA-25-1632-01A
0 years, female, white, stage:Stage IV, dead, 1799 days
1361.8
TCGA-09-1662-01A
0 years, female, white, stage:Stage IV, dead, 2717 days
1357.3
TCGA-24-1616-01A
0 years, female, white, stage:Stage IIIC, dead, 1163 days
1347.1
TCGA-13-0714-01A
0 years, female, white, stage:Stage IV, dead, 189 days
1336.6
TCGA-24-1434-01A
0 years, female, white, stage:Stage IIIC, dead, 568 days
1321.3
TCGA-23-2077-01A
0 years, female, white, stage:Stage IIIC, alive, 3525 days
1314.5
TCGA-04-1530-01A
0 years, female, white, stage:Stage IIIC, dead, 3622 days
1312.5
TCGA-09-1666-01A
0 years, female, white, stage:Stage IIIC, alive, 1752 days
1303.1
TCGA-13-1487-01A
0 years, female, white, stage:Stage IV, dead, 681 days
1298.1
TCGA-61-1914-01A
0 years, female, stage:Stage IIIC, alive, 1722 days
1287.7
TCGA-61-1725-01A
0 years, female, white, stage:Stage IIIC, alive, 956 days
1284.1
TCGA-13-1506-01A
0 years, female, white, stage:Stage IIIC, dead, 1039 days
1248.2
TCGA-24-2027-01A
0 years, female, white, stage:Stage IV, dead, 3337 days
1242.6
TCGA-24-1551-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
1239.8
TCGA-23-1809-01A
0 years, female, white, stage:Stage IIC, alive, 16 days
1225.9
TCGA-24-1552-01A
0 years, female, white, stage:Stage IIIC, dead, 1259 days
1219.2
TCGA-24-1423-01A
0 years, female, white, stage:Stage IIIC, alive, 190 days
1217.5
TCGA-29-1688-01A
0 years, female, white, stage:Stage IIIC, dead, 2400 days
1213.2
TCGA-13-1403-01A
0 years, female, white, stage:Stage IIIC, dead, 2345 days
1189.3
TCGA-61-1907-01A
0 years, female, white, stage:Stage IIIC, alive, 952 days
1182.2
TCGA-57-1582-01A
0 years, female, white, stage:Stage IIIC, dead, 731 days
1174.6
TCGA-13-0727-01A
0 years, female, white, stage:Stage IIIC, dead, 462 days
1171.4
TCGA-24-2281-01A
0 years, female, white, stage:Stage IIA, alive, 1357 days
1158.8
TCGA-20-0991-01A
0 years, female, white, stage:Stage IIB, alive, 797 days
1158.7
TCGA-24-2288-01A
0 years, female, white, stage:Stage IIIC, dead, 25 days
1146.3
TCGA-61-1738-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1089 days
1131.7
TCGA-23-1109-01A
0 years, female, white, stage:Stage IIIC, dead, 1562 days
1129.5
TCGA-24-2271-01A
0 years, female, asian, stage:Stage IIIC, dead, 962 days
1120.4
TCGA-61-2000-01A
0 years, female, white, stage:Stage IIIC, alive, 441 days
1119.1
TCGA-25-1626-01A
0 years, female, white, stage:Stage IIIC, dead, 518 days
1089.4
TCGA-25-1320-01A
0 years, female, white, stage:Stage IIIC, dead, 1155 days
1087.2
TCGA-25-1623-01A
0 years, female, white, stage:Stage IV, dead, 565 days
1083.9
TCGA-24-1105-01A
0 years, female, white, stage:Stage IIIC, dead, 1442 days
1071.2
TCGA-29-1701-01A
0 years, female, white, stage:Stage IIIC, dead, 515 days
1070.1
TCGA-25-1322-01A
0 years, female, white, stage:Stage IV, dead, 91 days
1066.8
TCGA-30-1860-01A
0 years, female, white, stage:Stage IIIC, dead, 1366 days
1066.7
TCGA-13-1410-01A
0 years, female, white, stage:Stage IV, alive, 2464 days
1061.8
TCGA-24-1558-01A
0 years, female, white, stage:Stage IIIC, dead, 594 days
1055.0
TCGA-61-2104-01A
0 years, female, white, stage:Stage IIC, alive, 2338 days
1049.8
TCGA-24-1604-01A
0 years, female, white, stage:Stage IIIC, dead, 2688 days
1046.2
TCGA-25-2396-01A
0 years, female, white, stage:Stage IIIC, dead, 92 days
1046.2
TCGA-10-0933-01A
0 years, female, white, stage:Stage IIIC, dead, 446 days
1037.3
TCGA-25-2392-01A
0 years, female, white, stage:Stage IV, dead, 31 days
1036.5
TCGA-24-1413-01A
0 years, female, white, stage:Stage IIIC, alive, 192 days
1035.0
TCGA-29-2425-01A
0 years, female, white, stage:Stage IIIC, alive, 1977 days
1022.9
TCGA-24-2261-01A
0 years, female, white, stage:Stage IIIC, dead, 24 days
1017.5
TCGA-13-0920-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
1012.6
TCGA-29-1703-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1815 days
1001.3
TCGA-29-1783-01A
0 years, female, white, stage:Stage IIIC, alive, 220 days
996.7
TCGA-29-1784-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
993.9
TCGA-13-0923-01A
0 years, female, white, stage:Stage IIIC, alive, 2547 days
993.1
TCGA-13-2060-01A
0 years, female, white, stage:Stage IV, alive, 2369 days
974.7
TCGA-61-1900-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 176 days
966.1
TCGA-04-1655-01A
0 years, female, white, stage:Stage IIIB, dead, 1380 days
959.6
TCGA-29-1763-01A
0 years, female, black or african american, stage:Stage IIC, alive, 2032 days
956.0
TCGA-24-1850-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
955.8
TCGA-61-2098-01A
0 years, female, white, stage:Stage IIIC, alive, 1993 days
952.4
TCGA-10-0931-01A
0 years, female, white, stage:Stage IIIC, dead, 1000 days
934.6
TCGA-25-1328-01A
0 years, female, white, stage:Stage IIIC, dead, 2009 days
932.3
TCGA-31-1951-01A
0 years, female, white, stage:Stage IIIC, alive, 684 days
931.6
TCGA-24-0968-01A
0 years, female, white, stage:Stage IIIC, dead, 598 days
931.3
TCGA-13-A5FT-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 2143 days
930.2
TCGA-13-0768-01A
0 years, female, white, stage:Stage IIIC, dead, 1784 days
923.9
TCGA-36-1570-01A
0 years, female, white, stage:Stage IIIC, alive, 655 days
914.2
TCGA-24-0982-01A
0 years, female, white, stage:Stage IIIC, dead, 679 days
897.8
TCGA-13-1408-01A
0 years, female, white, stage:Stage IIIC, dead, 1680 days
887.8
TCGA-04-1361-01A
0 years, female, white, stage:Stage IIIB, alive, 989 days
885.8
TCGA-25-2401-01A
0 years, female, white, stage:Stage IIIC, dead, 90 days
880.8
TCGA-61-1998-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
867.2
TCGA-29-1695-01A
0 years, female, white, stage:Stage IIIC, dead, 1229 days
854.0
TCGA-04-1331-01A
0 years, female, white, stage:Stage IIIC, dead, 1336 days
844.7
TCGA-31-1959-01A
0 years, female, white, stage:Stage IV, alive, 67 days
830.8
TCGA-57-1586-01A
0 years, female, white, stage:Stage IIIC, alive, 679 days
825.0
TCGA-24-1843-01A
0 years, female, white, stage:Stage IIIC, alive, 106 days
817.7
TCGA-61-1910-01A
0 years, female, white, stage:Stage IIC, alive, 1127 days
815.9
TCGA-61-1721-01A
0 years, female, white, stage:Stage IV, alive, 338 days
807.9
TCGA-04-1365-01A
0 years, female, white, stage:Stage IIIB, alive, 947 days
804.4
TCGA-09-1670-01A
0 years, female, white, stage:Stage IIIA, alive, 547 days
801.4
TCGA-30-1862-01A
0 years, female, white, stage:Stage IV, dead, 186 days
799.8
TCGA-24-1425-01A
0 years, female, white, stage:Stage IIIC, alive, 181 days
793.3
TCGA-13-1409-01A
0 years, female, white, stage:Stage IIIC, dead, 1742 days
786.6
TCGA-13-0886-01A
0 years, female, white, stage:Stage IIIC, alive, 4665 days
782.3
TCGA-61-1733-01A
0 years, female, white, stage:Stage IIIC, alive, 967 days
780.0
TCGA-10-0928-01A
0 years, female, white, stage:Stage IIIC, dead, 563 days
771.0
TCGA-24-2254-01A
0 years, female, white, stage:Stage IIIC, dead, 1736 days
766.3
TCGA-25-1628-01A
0 years, female, white, stage:Stage IIIC, dead, 627 days
765.3
TCGA-25-2398-01A
0 years, female, white, stage:Stage IIIC, dead, 1369 days
765.2
TCGA-24-2289-01A
0 years, female, white, stage:Stage IV, dead, 2049 days
763.0
TCGA-24-2267-01A
0 years, female, white, stage:Stage IIB, dead, 1446 days
762.6
TCGA-25-1313-01A
0 years, female, white, stage:Stage IV, dead, 820 days
761.5
TCGA-24-2293-01A
0 years, female, white, stage:'--, dead, 506 days
756.6
TCGA-25-1317-01A
0 years, female, white, stage:Stage IIIC, dead, 61 days
750.7
TCGA-36-1577-01A
0 years, female, asian, stage:Stage IIC, alive, 783 days
744.6
TCGA-61-2110-01A
0 years, female, white, stage:Stage IIIC, dead, 1354 days
741.5
TCGA-09-1669-01A
0 years, female, white, stage:Stage IIIA, alive, 928 days
736.8
TCGA-25-2400-01A
0 years, female, white, stage:Stage IIIC, dead, 1278 days
718.7
TCGA-61-1995-01A
0 years, female, white, stage:Stage IIIC, alive, 61 days
717.0
TCGA-24-2290-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
716.8
TCGA-25-1323-01A
0 years, female, white, stage:Stage IIIC, dead, 395 days
697.9
TCGA-04-1648-01A
0 years, female, white, stage:Stage IIIC, dead, 871 days
696.5
TCGA-24-1603-01A
0 years, female, white, stage:Stage IIIB, dead, 2742 days
692.5
TCGA-13-0906-01A
0 years, female, white, stage:Stage IIIC, alive, 3619 days
688.3
TCGA-57-1583-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 346 days
679.1
TCGA-24-2033-01A
0 years, female, white, stage:Stage IIIC, dead, 562 days
668.6
TCGA-24-1467-01A
0 years, female, white, stage:Stage IIIC, dead, 3224 days
661.4
TCGA-13-0724-01A
0 years, female, white, stage:Stage IV, dead, 83 days
652.6
TCGA-24-1923-01A
0 years, female, white, stage:Stage IIIC, dead, 690 days
642.1
TCGA-09-0369-01A
0 years, female, white, stage:Stage IIIC, dead, 1082 days
638.1
TCGA-24-1846-01A
0 years, female, stage:Stage IIIC, alive, 133 days
616.5
TCGA-13-1404-01A
0 years, female, white, stage:Stage IIIC, alive, 2469 days
611.6
TCGA-24-2280-01A
0 years, female, white, stage:Stage IIIC, alive, 2143 days
610.8
TCGA-24-1550-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
604.1
TCGA-29-2414-01A
0 years, female, white, stage:Stage IIIC, dead, 2621 days
598.8
TCGA-13-1497-01A
0 years, female, white, stage:Stage IIIC, alive, 3871 days
586.3
TCGA-61-2109-01A
0 years, female, white, stage:Stage IIIC, dead, 629 days
572.0
TCGA-36-1581-01A
0 years, female, white, stage:Stage IIC, alive, 751 days
571.9
TCGA-24-2020-01A
0 years, female, white, stage:Stage IIIC, dead, 4624 days
555.0
TCGA-OY-A56Q-01A
0 years, female, black or african american, stage:Stage IIA, alive, 576 days
554.7
TCGA-61-2111-01A
0 years, female, white, stage:Stage IV, alive, 3825 days
546.1
TCGA-25-1633-01A
0 years, female, white, stage:Stage IIIC, dead, 1891 days
532.3
TCGA-13-1499-01A
0 years, female, white, stage:Stage IIIC, alive, 3500 days
529.9
TCGA-30-1853-01A
0 years, female, white, stage:Stage IIIC, dead, 1103 days
522.9
TCGA-10-0938-01A
0 years, female, white, stage:Stage IIIC, dead, 636 days
517.1
TCGA-23-1030-01A
0 years, female, white, stage:Stage IIIC, alive, 886 days
504.2
TCGA-13-0766-01A
0 years, female, white, stage:Stage IIIC, dead, 1725 days
503.8
TCGA-25-1870-01A
0 years, female, white, stage:Stage IIIC, dead, 455 days
498.8
TCGA-59-2363-01A
0 years, female, asian, stage:Stage IIIA, alive, 165 days
493.9
TCGA-25-1316-01A
0 years, female, white, stage:Stage IIIC, dead, 1279 days
487.6
TCGA-61-2097-01A
0 years, female, white, stage:Stage IIC, alive, 1844 days
484.7
TCGA-04-1364-01A
0 years, female, white, stage:Stage IIIC, dead, 1024 days
482.6
TCGA-24-1418-01A
0 years, female, white, stage:Stage IIIC, alive, 243 days
472.5
TCGA-23-1110-01A
0 years, female, white, stage:Stage IIIC, alive, 1658 days
468.8
TCGA-23-1022-01A
0 years, female, white, stage:Stage IIIC, dead, 1511 days
467.4
TCGA-24-1553-01A
0 years, female, white, stage:Stage IIIB, dead, 1767 days
466.0
TCGA-24-1464-01A
0 years, female, white, stage:Stage IIIC, dead, 379 days
458.1
TCGA-04-1332-01A
0 years, female, white, stage:Stage IIIC, dead, 1247 days
457.2
TCGA-24-1469-01A
0 years, female, white, stage:Stage IIIC, alive, 277 days
446.6
TCGA-24-1426-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
433.0
TCGA-09-2054-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 637 days
428.6
TCGA-04-1347-01A
0 years, female, white, stage:Stage IV, alive, 1919 days
417.3
TCGA-10-0927-01A
0 years, female, stage:Stage IIIC, dead, 2490 days
412.7
TCGA-25-1634-01A
0 years, female, white, stage:Stage IIIC, dead, 1091 days
398.0
TCGA-24-1424-01A
0 years, female, white, stage:Stage IIIC, alive, 183 days
396.3
TCGA-61-1741-01A
0 years, female, white, stage:Stage IIIB, dead, 1024 days
390.9
TCGA-24-1427-01A
0 years, female, stage:Stage IIIC, alive, 147 days
389.4
TCGA-29-1762-01A
0 years, female, white, stage:Stage IV, dead, 2634 days
386.3
TCGA-25-1315-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
377.6
TCGA-59-2350-01A
0 years, female, stage:Stage IV, dead, 679 days
375.7
TCGA-29-1778-01A
0 years, female, white, stage:Stage IIIC, alive, 454 days
372.7
TCGA-61-2088-01A
0 years, female, white, stage:Stage IIIC, alive, 145 days
365.9
TCGA-04-1519-01A
0 years, female, stage:Stage IIIC, alive, 24 days
358.3
TCGA-29-A5NZ-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1088 days
353.1
TCGA-04-1514-01A
0 years, female, white, stage:Stage IIIA, dead, 1720 days
350.8
TCGA-59-2351-01A
0 years, female, white, stage:Stage IIIC, alive, 3532 days
347.6
TCGA-25-1312-01A
0 years, female, white, stage:Stage IV, dead, 31 days
337.7
TCGA-24-1544-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 820 days
335.0
TCGA-24-1560-01A
0 years, female, white, stage:Stage IIIC, dead, 1341 days
333.5
TCGA-29-1774-01A
0 years, female, white, stage:Stage IIIC, alive, 527 days
326.7
TCGA-13-1407-01A
0 years, female, white, stage:Stage IIIC, alive, 2534 days
325.2
TCGA-09-2048-01A
0 years, female, white, stage:Stage IIIC, dead, 138 days
316.1
TCGA-25-1321-01A
0 years, female, white, stage:Stage IIIC, dead, 1033 days
309.6
TCGA-13-0888-01A
0 years, female, white, stage:Stage IIIC, dead, 2811 days
299.1
TCGA-13-0800-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
297.0
TCGA-24-1474-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 676 days
294.0
TCGA-29-1697-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
289.0
TCGA-13-0730-01A
0 years, female, white, stage:Stage IIIC, dead, 542 days
285.3
TCGA-13-1505-01A
0 years, female, white, stage:Stage IIIC, alive, 1998 days
275.6
TCGA-24-1430-01A
0 years, female, white, stage:Stage IIIC, dead, 863 days
267.8
TCGA-61-2102-01A
0 years, female, white, stage:Stage IIIC, dead, 197 days
254.7
TCGA-24-1567-01A
0 years, female, white, stage:Stage IIIB, dead, 524 days
249.2
TCGA-04-1350-01A
0 years, female, white, stage:Stage IIIC, dead, 1946 days
248.8
TCGA-WR-A838-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 304 days
232.4
TCGA-5X-AA5U-01A
0 years, female, black or african american, stage:Stage IIC, alive, 361 days
216.7
TCGA-25-1877-01A
0 years, female, white, stage:Stage IIIC, dead, 730 days
211.5
TCGA-59-2352-01A
0 years, female, white, stage:Stage IIIC, dead, 286 days
207.6
TCGA-13-1492-01A
0 years, female, white, stage:Stage IIIC, dead, 3819 days
203.9
TCGA-23-1123-01A
0 years, female, white, stage:Stage IIIC, dead, 1018 days
192.6
TCGA-36-1571-01A
0 years, female, white, stage:Stage IIIB, dead, 695 days
182.7
TCGA-25-1319-01A
0 years, female, white, stage:Stage IIIC, dead, 1977 days
182.0
TCGA-25-2393-01A
0 years, female, white, stage:Stage IIIC, dead, 1157 days
173.2
TCGA-13-0916-01A
0 years, female, white, stage:Stage IIIC, alive, 1785 days
163.7
TCGA-23-1024-01A
0 years, female, white, stage:Stage IV, alive, 468 days
100.5
TCGA-09-0364-01A
0 years, female, white, stage:Stage IIC, dead, 887 days
85.8
TCGA-24-1419-01A
0 years, female, white, stage:Stage IIIC, alive, 239 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
S100A6 is not prognostic in Ovary Serous Cystadenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
2203.9
Number of samples
81
Samples
Sample
Description
TPM
DO46350
0 years, female, NA, stage:III, dead, 886 days
10311.0
DO46333
0 years, female, NA, stage:III, dead, 359 days
8124.0
DO46366
0 years, female, NA, stage:III, dead, 2054 days
7126.6
DO46380
0 years, female, NA, stage:III, dead, 1423 days
6014.0
DO46581
0 years, female, NA, stage:III, dead, 408 days
5875.8
DO46551
0 years, female, NA, stage:III, dead, 1055 days
5514.7
DO46372
0 years, female, NA, stage:III, dead, 1326 days
5113.8
DO46611
0 years, female, NA, stage:III, dead, 734 days
4857.2
DO46327
0 years, female, NA, stage:III, dead, 184 days
4487.9
DO46388
0 years, female, NA, stage:III, dead, 413 days
4263.6
DO46546
0 years, female, NA, stage:III, dead, 1889 days
3967.6
DO46428
0 years, female, NA, stage:IV, alive, 2644 days
3826.0
DO46354
0 years, female, NA, stage:III, dead, 843 days
3640.7
DO46591
0 years, female, NA, stage:III, dead, 195 days
3602.3
DO46448
0 years, female, NA, stage:III, dead, 654 days
3584.1
DO46571
0 years, female, NA, stage:III, dead, 243 days
3330.8
DO46374
0 years, female, NA, stage:III, dead, 1409 days
3281.6
DO46342
0 years, female, NA, stage:III, dead, 1398 days
3092.7
DO46438
0 years, female, NA, stage:IV, alive, 2227 days
2916.3
DO46326
0 years, female, NA, stage:III, dead, 701 days
2770.9
DO46513
0 years, female, NA, stage:IV, dead, 1883 days
2717.6
DO46538
0 years, female, NA, stage:III, dead, 1527 days
2681.6
DO46378
0 years, female, NA, stage:III, alive, 843 days
2308.1
DO46364
0 years, female, NA, stage:III, dead, 806 days
2290.6
DO46458
0 years, female, NA, stage:IV, alive, 3787 days
2217.2
DO46331
0 years, female, NA, stage:III, dead, 612 days
2208.6
DO46606
0 years, female, NA, stage:III, alive, 804 days
2206.0
DO46533
0 years, female, NA, stage:III, alive, 3667 days
2179.9
DO46568
0 years, female, NA, stage:III, dead, 320 days
2135.5
DO46330
0 years, female, NA, stage:III, dead, 684 days
2104.3
DO46412
0 years, female, NA, stage:III, dead, 597 days
2091.6
DO46390
0 years, female, NA, stage:III, dead, 374 days
2085.1
DO46508
0 years, female, NA, stage:III, dead, 2101 days
2070.4
DO46360
0 years, female, NA, stage:IV, dead, 1759 days
2003.5
DO46576
0 years, female, NA, stage:III, alive, 133 days
1998.2
DO46453
0 years, female, NA, stage:III, dead, 3294 days
1923.3
DO46443
0 years, female, NA, stage:III, dead, 2464 days
1850.6
DO46400
0 years, female, NA, stage:III, dead, 719 days
1850.3
DO46404
0 years, female, NA, stage:III, dead, 690 days
1799.3
DO46325
0 years, female, NA, stage:III, dead, 477 days
1790.5
DO46370
0 years, female, NA, stage:III, dead, 1727 days
1714.8
DO46329
0 years, female, NA, stage:III, dead, 1699 days
1706.0
DO46586
0 years, female, NA, stage:III, dead, 1019 days
1678.6
DO46382
0 years, female, NA, stage:IV, dead, 311 days
1646.6
DO46368
0 years, female, NA, stage:III, dead, 2879 days
1637.4
DO46398
0 years, female, NA, stage:III, alive, 437 days
1539.0
DO46334
0 years, female, NA, stage:III, dead, 496 days
1529.8
DO46528
0 years, female, NA, stage:III, alive, 6139 days
1409.6
DO46376
0 years, female, NA, stage:III, dead, 1430 days
1371.5
DO46396
0 years, female, NA, stage:III, dead, 583 days
1349.9
DO46332
0 years, female, NA, stage:III, dead, 689 days
1339.6
DO46392
0 years, female, NA, stage:III, dead, 628 days
1248.9
DO46346
0 years, female, NA, stage:III, dead, 1187 days
1135.8
DO46518
0 years, female, NA, stage:III, alive, 2960 days
1101.9
DO46348
0 years, female, NA, stage:IV, dead, 287 days
1089.2
DO46432
0 years, female, NA, stage:III, alive, 2218 days
1051.5
DO46328
0 years, female, NA, stage:III, dead, 972 days
1033.1
DO46340
0 years, female, NA, stage:III, dead, 616 days
1028.5
DO46597
0 years, female, NA, stage:III, dead, 393 days
1015.2
DO46394
0 years, female, NA, stage:IV, dead, 1039 days
1006.5
DO46493
0 years, female, NA, stage:IV, alive, 839 days
978.9
DO46561
0 years, female, NA, stage:III, dead, 195 days
975.6
DO46356
0 years, female, NA, stage:III, dead, 911 days
940.0
DO46384
0 years, female, NA, stage:III, dead, 614 days
922.0
DO46602
0 years, female, NA, stage:III, dead, 205 days
914.0
DO46352
0 years, female, NA, stage:III, dead, 677 days
826.6
DO46560
0 years, female, NA, stage:IV, dead, 286 days
771.8
DO46463
0 years, female, NA, stage:III, dead, 2451 days
759.6
DO46344
0 years, female, NA, stage:III, dead, 642 days
741.9
DO46386
0 years, female, NA, stage:III, dead, 1162 days
736.1
DO46402
0 years, female, NA, stage:III, dead, 511 days
724.4
DO46338
0 years, female, NA, stage:III, dead, 596 days
691.0
DO46566
0 years, female, NA, stage:III, dead, 673 days
677.2
DO46336
0 years, female, NA, stage:IV, dead, 664 days
499.3
DO46523
0 years, female, NA, stage:IV, alive, 1873 days
479.2
DO46588
0 years, female, NA, stage:III, dead, 438 days
442.2
DO46362
0 years, female, NA, stage:III, dead, 1639 days
422.2
DO46358
0 years, female, NA, stage:III, dead, 423 days
351.9
DO46436
0 years, female, NA, stage:III, alive, 3193 days
351.6
DO46408
0 years, female, NA, stage:III, dead, 489 days
294.9
DO46468
0 years, female, NA, stage:III, alive, 2776 days
176.0
Show allShow less
OVARY SEROUS CYSTADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
108
Samples
Sample ID
Sample type
nRPX
8234f8ea-bdbd-45b0-bd0b-16f1e7_D2
Tumor
1.5
0c87932d-b6fd-4eb5-b86a-a34d07_D2
Tumor
0.4
c17b0ff9-9057-4848-a0cc-abb25f_D2
Tumor
0.3
05387aad-2a1f-42c2-8d6f-950598_D3
Tumor
0.1
27f3ca2d-a86f-479d-8e7e-5307c7_D2
Tumor
0.1
21efd60f-6a31-4b98-9477-16a905_D2
Normal
0.0
285fed94-1495-448e-879b-b55de9_D2
Tumor
0.0
a3a26070-fb84-406a-8280-d555e6_D2
Normal
0.0
35a345a4-e954-4c81-ae3f-7797cd_D2
Tumor
-0.1
e6850782-fd2a-4c53-b682-1852fe_D2
Tumor
-0.1
49bd51fe-48a1-4828-b66e-b30c38_D2
Tumor
-0.2
42d860a3-8a0c-4c44-a09a-9ad8cf_D2
Tumor
-0.2
b9c1f22e-61f7-45ed-b3b4-5094c7_D2
Normal
-0.2
927f0958-db5a-4bc5-92b7-2a3695_D2
Tumor
-0.2
3e746bea-ed68-40e6-b348-6ddf08_D2
Normal
-0.3
2b4ce90c-8036-4207-ac3e-54a76f_D2
Tumor
-0.3
80873a0c-1f40-4d51-bab1-3f2071_D2
Tumor
-0.3
340a3769-3031-41ae-bb08-a2f696_D2
Normal
-0.3
e3ebe010-cd31-4b5d-8fcb-b7103b_D2
Tumor
-0.4
eb3f3494-7057-4afe-b212-e6e9a3_D2
Tumor
-0.4
3a380577-c134-47ba-a1ce-988d7c_D2
Tumor
-0.5
347e379b-77c0-4dd3-aa25-18c9d1_D2
Tumor
-0.5
2563cb02-d58a-4286-8634-7502cd_D2
Tumor
-0.5
2f901c90-617e-46da-9fac-d68369_D2
Tumor
-0.6
5c3971ee-87c7-4dff-b66e-f18892_D2
Tumor
-0.6
af95e2c6-25c4-4ab8-bf06-3e15ff_D2
Tumor
-0.6
74a45e5a-a35a-4c60-a4b4-f3f5ea_D2
Tumor
-0.7
79b60f32-6cca-4cb6-9a1e-22a3ac_D2
Tumor
-0.7
e7b656bf-3c34-4ba1-bdf3-c7eefe_D2
Tumor
-0.8
31c15e30-21d4-4843-bd4a-9cd0d8_D2
Normal
-0.8
a583d3ff-8165-43e9-b764-23b7ef_D1_D2
Normal
-0.8
256ac9f5-1e19-44b4-92fb-fef3fc_D2
Tumor
-0.8
51a4ce2f-4166-4c6b-a7e0-942d0a_D2
Tumor
-0.8
092af714-b97a-457c-b0e9-8c20e8_D2
Normal
-0.8
fbb41c94-aabd-49cc-90b2-882c3e_D2
Tumor
-0.9
cfd76f9a-ce60-4ec7-8e6b-a8fc31_D3
Tumor
-1.0
5ea22f5e-307b-491d-801f-8b7fa6_D2
Tumor
-1.0
8ed739dd-ae0f-4881-971a-db3cf4_D1_D2
Normal
-1.0
7069e990-4a4e-4984-a66d-4d835a_D2
Tumor
-1.0
1556af7e-c2ae-4fce-9aae-87c459_D1_D2
Normal
-1.1
e23eb014-69c1-460a-b9d4-9786c8_D2
Normal
-1.1
1de8d3d8-fc0e-4be0-8aa7-127c7b_D2
Tumor
-1.1
1c9145ad-1981-4871-aa7e-8b11de_D2
Tumor
-1.1
9e0d47e0-f633-468b-b82b-4d752d_D2
Tumor
-1.1
627e6e36-3dca-4ee5-9755-6f3510_D2
Tumor
-1.1
61f76fe6-a1c6-41b8-bdc2-2f9209_D2
Normal
-1.2
9c8e78bf-b03e-4ba0-9909-5ff070_D2
Tumor
-1.3
76e77c6b-c80e-4391-bdbb-e1dcea_D2
Tumor
-1.3
3fbf076a-824b-4eac-b6dc-bf5e59_D2
Normal
-1.3
3d3e1888-d67e-4c69-ba83-112d0f_D2
Tumor
-1.3
0745488e-0bfb-4d1f-8228-dedf76_D1_D2
Normal
-1.3
2433b136-fc7b-4cea-b958-bc6efb_D2
Tumor
-1.4
d4791079-c826-4fc7-9d9b-ee20ba_D2
Tumor
-1.4
62f5840e-6cd7-4200-b651-645e53_D2
Tumor
-1.5
1772e913-f62e-446a-8cf3-720348_D2
Tumor
-1.5
1a10c200-3895-4648-b951-94f99f_D2
Tumor
-1.5
7d953d1d-84b6-4ecd-b1d7-1ed865_D2
Tumor
-1.5
6319b36b-533c-4e86-8e12-80552e_D3
Tumor
-1.5
10c2d629-0287-4511-ac25-f29031_D2
Tumor
-1.6
2b73e01c-347a-4dae-a71d-752aeb_D2
Normal
-1.6
f6c215ea-5381-4521-bb61-be8e97_D2
Tumor
-1.6
685ec3c2-e67a-40d3-9eb3-aa01c9_D1_D2
Normal
-1.6
2224c03f-b7b1-4368-887e-2b4cdf_D2
Tumor
-1.7
3946a96c-e0ae-442f-83b4-a9350e_D2
Tumor
-1.7
994f9b8e-46cb-413f-8ec8-2c2fed_D2
Normal
-1.7
a8853382-b726-4ce8-98d5-ca89df_D2
Tumor
-1.7
51c1c79e-5a8e-4b0a-bf92-1c0cab_D2
Tumor
-1.7
1abbcb28-f221-4cd4-8c01-37b9bb_D1_D2
Normal
-1.8
bd266bdd-12e4-42cb-9c49-911bfc_D2
Tumor
-1.8
ce1e5dfc-2ef1-4633-af93-5ea4d9_D2
Tumor
-1.8
2ed8beb2-bc63-4bad-b5fe-1916a0_D2
Tumor
-1.9
558333b0-ea23-4303-9e3c-4932b1_D2
Tumor
-1.9
161317f3-1a39-438e-af45-cd2502_D2
Tumor
-1.9
4ccb249a-6722-491e-97e9-e3b4e7_D2
Tumor
-2.0
9b90eb78-2f50-4aeb-b010-d642f9_D2
Tumor
-2.0
d38f40fb-dd78-43b2-8b7b-4b6977_D2
Tumor
-2.2
9a7a86d3-bbf2-4d36-941d-c75c03_D1_D2
Tumor
-2.2
6530147a-efe9-4df6-ac2f-03ece3_D2
Tumor
-2.2
318d53c3-216b-4de1-a098-77d6dd_D2
Tumor
-2.2
7edfd606-4bee-4529-9fec-1ca7f0_D2
Normal
-2.2
69d552be-7cb2-4bb4-b602-a27b3e_D2
Tumor
-2.3
8d78194e-fbef-4819-a7b5-b73ae9_D2
Tumor
-2.3
28d0abdb-f682-4bd3-9425-a9c508_D2
Tumor
-2.3
d109a3c0-350e-47f5-bda0-61899c_D2
Tumor
-2.4
2dc28da8-7ff1-4b9b-b5bd-17cc25_D2
Tumor
-2.4
e9d416e7-f661-400a-896e-388545_D2
Tumor
-2.4
52c064a7-78d9-4a1a-85b4-27c6d1_D2
Tumor
-2.4
eb0a53df-7620-4024-8d2d-051142_D2
Tumor
-2.4
6e209757-a7f4-45af-b5f3-2ebc02_D2
Normal
-2.5
b22659b9-e12c-4725-a7db-a833de_D1_D2
Normal
-2.5
efc971f8-54c5-4531-a792-705ecf_D2
Tumor
-2.5
08296da7-70ea-44df-8646-09f2cc_D2
Tumor
-2.5
15524912-685a-47ce-a824-567848_D2
Tumor
-2.5
1b2ab076-c72f-4bbe-b9f9-657d24_D2
Tumor
-2.5
3dcf8b3c-c0c5-4dfa-9543-5d30fb_D2
Tumor
-2.5
91b287fd-eadb-442d-abcd-20b741_D2
Tumor
-2.5
7c7ce2d7-6c8a-424e-8e6c-d14ad1_D2
Tumor
-2.5
2115808b-6a0d-49bc-a8d7-b83bde_D2
Tumor
-2.6
46c73531-f531-4ec3-97fe-b39d9d_D2
Tumor
-2.6
50997c44-1c8b-4d34-b535-4a6cc2_D2
Tumor
-2.7
41d0619e-b299-42e2-ac32-29e784_D2
Tumor
-2.7
a65d8e76-640f-4341-a561-afbb57_D2
Normal
-2.8
3490835c-c004-45ed-91f3-7c206f_D2
Tumor
-2.8
fe83e13f-9754-403b-8f74-d6caf8_D2
Tumor
-2.8
1db5574d-aca7-403c-8100-6e705f_D2
Normal
-2.9
0cc794c3-5bf5-4621-b238-58a0f6_D2
Tumor
-3.0
8e17b45e-6a06-4e4e-913d-7b1edb_D2
Tumor
-3.1
a03d1103-b809-42c4-ad5c-5aff58_D2
Tumor
-3.1
Show allShow less
OVARIAN CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.