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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
S100A10 is not prognostic in Ovary Serous Cystadenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
389.2
Number of samples
349
Samples
Sample
Description
TPM
TCGA-13-0726-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
2328.7
TCGA-09-0366-01A
0 years, female, white, stage:Stage IIIC, dead, 1757 days
2121.9
TCGA-59-2348-01A
0 years, female, white, stage:Stage IIIC, alive, 5481 days
2014.7
TCGA-61-1733-01A
0 years, female, white, stage:Stage IIIC, alive, 967 days
1875.7
TCGA-13-1485-01A
0 years, female, white, stage:Stage IV, dead, 629 days
1513.0
TCGA-30-1857-01A
0 years, female, white, stage:Stage IV, dead, 8 days
1465.7
TCGA-29-2428-01A
0 years, female, white, stage:Stage IIIC, alive, 1372 days
1449.9
TCGA-30-1866-01A
0 years, female, white, stage:Stage IV, dead, 1114 days
1353.9
TCGA-09-1673-01A
0 years, female, white, stage:Stage IV, alive, 92 days
1324.3
TCGA-30-1891-01A
0 years, female, white, stage:Stage IIIC, dead, 914 days
1277.4
TCGA-29-1690-01A
0 years, female, white, stage:Stage IIIC, dead, 1448 days
1229.8
TCGA-24-2020-01A
0 years, female, white, stage:Stage IIIC, dead, 4624 days
1203.4
TCGA-04-1536-01A
0 years, female, black or african american, stage:Stage IV, dead, 885 days
1145.5
TCGA-04-1655-01A
0 years, female, white, stage:Stage IIIB, dead, 1380 days
1095.1
TCGA-13-1477-01A
0 years, female, white, stage:Stage IV, dead, 1662 days
1080.2
TCGA-23-1111-01A
0 years, female, white, stage:Stage IIIC, alive, 98 days
1032.5
TCGA-24-1549-01A
0 years, female, white, stage:Stage IIIB, dead, 1721 days
993.2
TCGA-25-2404-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 883 days
991.0
TCGA-13-0924-01A
0 years, female, white, stage:Stage IV, alive, 2614 days
964.9
TCGA-23-1809-01A
0 years, female, white, stage:Stage IIC, alive, 16 days
950.3
TCGA-13-0897-01A
0 years, female, white, stage:Stage IIIC, dead, 2182 days
917.3
TCGA-29-1770-01A
0 years, female, white, stage:Stage IIIC, alive, 741 days
901.2
TCGA-30-1892-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
865.3
TCGA-13-1405-01A
0 years, female, white, stage:Stage IV, dead, 868 days
859.5
TCGA-13-0765-01A
0 years, female, white, stage:Stage IIIC, dead, 1389 days
834.4
TCGA-24-2035-01A
0 years, female, white, stage:Stage IIIC, dead, 857 days
830.8
TCGA-13-0883-01A
0 years, female, white, stage:Stage IIIC, dead, 2097 days
782.2
TCGA-61-2012-01A
0 years, female, white, stage:Stage IIC, alive, 932 days
779.4
TCGA-20-1682-01A
0 years, female, white, stage:Stage IIIC, alive, 837 days
779.1
TCGA-29-1785-01A
0 years, female, white, stage:Stage IIIC, dead, 1104 days
777.0
TCGA-13-1512-01A
0 years, female, white, stage:Stage IIIC, alive, 442 days
759.4
TCGA-09-0367-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IIIC, dead, 547 days
759.0
TCGA-29-A5NZ-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1088 days
759.0
TCGA-36-1580-01A
0 years, female, stage:Stage IIIC, dead, 737 days
755.1
TCGA-25-1635-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
753.7
TCGA-61-1724-01A
0 years, female, white, stage:Stage IIIC, dead, 637 days
753.7
TCGA-24-2038-01A
0 years, female, white, stage:Stage IIIA, dead, 1354 days
748.2
TCGA-13-1487-01A
0 years, female, white, stage:Stage IV, dead, 681 days
748.1
TCGA-04-1651-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
737.1
TCGA-25-1329-01A
0 years, female, white, stage:Stage IIIC, dead, 457 days
731.3
TCGA-13-1495-01A
0 years, female, white, stage:Stage IIIC, dead, 2749 days
701.7
TCGA-57-1993-01A
0 years, female, white, stage:Stage IIIC, alive, 763 days
695.8
TCGA-13-2060-01A
0 years, female, white, stage:Stage IV, alive, 2369 days
689.9
TCGA-24-1847-01A
0 years, female, white, stage:Stage IV, alive, 343 days
687.1
TCGA-20-0987-01A
0 years, female, white, stage:Stage IIIC, dead, 701 days
676.7
TCGA-25-2409-01A
0 years, female, white, stage:Stage IV, dead, 821 days
673.5
TCGA-23-1116-01A
0 years, female, white, stage:Stage IIIC, dead, 592 days
671.0
TCGA-13-0797-01A
0 years, female, white, stage:Stage IIIC, alive, 2121 days
656.6
TCGA-29-1769-01A
0 years, female, white, stage:Stage IIIC, alive, 699 days
645.9
TCGA-13-0911-01A
0 years, female, white, stage:Stage IV, dead, 1355 days
641.4
TCGA-24-2288-01A
0 years, female, white, stage:Stage IIIC, dead, 25 days
640.2
TCGA-29-1768-01A
0 years, female, white, stage:Stage IV, dead, 952 days
628.3
TCGA-13-0762-01A
0 years, female, white, stage:Stage IIIC, alive, 3400 days
624.5
TCGA-24-1434-01A
0 years, female, white, stage:Stage IIIC, dead, 568 days
616.4
TCGA-25-1633-01A
0 years, female, white, stage:Stage IIIC, dead, 1891 days
612.3
TCGA-25-2401-01A
0 years, female, white, stage:Stage IIIC, dead, 90 days
605.1
TCGA-13-1509-01A
0 years, female, white, stage:Stage IV, alive, 2438 days
602.2
TCGA-61-2003-01A
0 years, female, white, stage:Stage IIIC, alive, 122 days
600.9
TCGA-24-1418-01A
0 years, female, white, stage:Stage IIIC, alive, 243 days
598.6
TCGA-29-1711-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 1053 days
591.6
TCGA-13-1409-01A
0 years, female, white, stage:Stage IIIC, dead, 1742 days
584.4
TCGA-13-1505-01A
0 years, female, white, stage:Stage IIIC, alive, 1998 days
581.2
TCGA-61-1721-01A
0 years, female, white, stage:Stage IV, alive, 338 days
577.8
TCGA-09-1666-01A
0 years, female, white, stage:Stage IIIC, alive, 1752 days
575.2
TCGA-13-0725-01A
0 years, female, white, stage:Stage IIIC, dead, 377 days
575.0
TCGA-13-1499-01A
0 years, female, white, stage:Stage IIIC, alive, 3500 days
569.3
TCGA-13-1510-01A
0 years, female, white, stage:Stage IIIC, dead, 1359 days
566.7
TCGA-25-2398-01A
0 years, female, white, stage:Stage IIIC, dead, 1369 days
552.2
TCGA-13-0768-01A
0 years, female, white, stage:Stage IIIC, dead, 1784 days
548.2
TCGA-10-0933-01A
0 years, female, white, stage:Stage IIIC, dead, 446 days
542.8
TCGA-59-2354-01A
0 years, female, white, stage:Stage IIIC, dead, 1046 days
532.3
TCGA-29-1783-01A
0 years, female, white, stage:Stage IIIC, alive, 220 days
531.4
TCGA-04-1338-01A
0 years, female, white, stage:Stage IIIC, alive, 1418 days
526.4
TCGA-13-1407-01A
0 years, female, white, stage:Stage IIIC, alive, 2534 days
525.7
TCGA-25-1631-01A
0 years, female, white, stage:Stage IIIC, dead, 9 days
517.4
TCGA-23-1113-01A
0 years, female, white, stage:Stage IV, dead, 949 days
517.1
TCGA-25-1328-01A
0 years, female, white, stage:Stage IIIC, dead, 2009 days
512.4
TCGA-61-2113-01A
0 years, female, white, stage:Stage IIC, dead, 676 days
510.6
TCGA-13-1489-01A
0 years, female, white, stage:Stage IIIC, dead, 2553 days
506.6
TCGA-57-1585-01A
0 years, female, white, stage:Stage IIIC, dead, 53 days
503.7
TCGA-24-1103-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1646 days
497.4
TCGA-25-1317-01A
0 years, female, white, stage:Stage IIIC, dead, 61 days
497.3
TCGA-61-2002-01A
0 years, female, white, stage:Stage IIIC, alive, 547 days
494.9
TCGA-25-2042-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 396 days
493.2
TCGA-25-1626-01A
0 years, female, white, stage:Stage IIIC, dead, 518 days
489.8
TCGA-13-1501-01A
0 years, female, white, stage:Stage IV, dead, 1314 days
483.7
TCGA-24-2027-01A
0 years, female, white, stage:Stage IV, dead, 3337 days
480.5
TCGA-04-1332-01A
0 years, female, white, stage:Stage IIIC, dead, 1247 days
480.0
TCGA-24-1544-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 820 days
479.5
TCGA-24-1550-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
477.1
TCGA-29-1710-01A
0 years, female, white, stage:Stage IIIC, dead, 951 days
473.5
TCGA-29-1696-01A
0 years, female, white, stage:Stage IIIC, dead, 1032 days
472.4
TCGA-23-2084-01A
0 years, female, white, stage:Stage IV, dead, 1516 days
471.3
TCGA-30-1861-01A
0 years, female, white, stage:Stage IIIC, dead, 1058 days
471.2
TCGA-25-1623-01A
0 years, female, white, stage:Stage IV, dead, 565 days
469.8
TCGA-24-2289-01A
0 years, female, white, stage:Stage IV, dead, 2049 days
467.8
TCGA-59-2363-01A
0 years, female, asian, stage:Stage IIIA, alive, 165 days
463.8
TCGA-29-1705-01A
0 years, female, white, stage:Stage IIIC, dead, 555 days
462.3
TCGA-25-1630-01A
0 years, female, white, stage:Stage IIIC, dead, 1162 days
460.4
TCGA-30-1853-01A
0 years, female, white, stage:Stage IIIC, dead, 1103 days
458.9
TCGA-24-1928-01A
0 years, female, white, stage:Stage IIIC, dead, 336 days
458.6
TCGA-29-1763-01A
0 years, female, black or african american, stage:Stage IIC, alive, 2032 days
458.3
TCGA-04-1530-01A
0 years, female, white, stage:Stage IIIC, dead, 3622 days
453.2
TCGA-29-1693-01A
0 years, female, white, stage:Stage IIIC, alive, 3096 days
451.7
TCGA-24-1546-01A
0 years, female, white, stage:Stage IIIC, dead, 1955 days
448.0
TCGA-61-2110-01A
0 years, female, white, stage:Stage IIIC, dead, 1354 days
447.3
TCGA-04-1343-01A
0 years, female, white, stage:Stage IV, dead, 361 days
446.9
TCGA-13-1410-01A
0 years, female, white, stage:Stage IV, alive, 2464 days
443.6
TCGA-36-1576-01A
0 years, female, stage:Stage IIIC, alive, 915 days
441.4
TCGA-13-1411-01A
0 years, female, white, stage:Stage IIIC, dead, 531 days
440.2
TCGA-24-1563-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1451 days
438.4
TCGA-20-1683-01A
0 years, female, white, stage:Stage IIIC, alive, 772 days
434.6
TCGA-04-1519-01A
0 years, female, stage:Stage IIIC, alive, 24 days
426.5
TCGA-29-1777-01A
0 years, female, white, stage:Stage IIIC, alive, 374 days
425.8
TCGA-23-1030-01A
0 years, female, white, stage:Stage IIIC, alive, 886 days
421.6
TCGA-25-1634-01A
0 years, female, white, stage:Stage IIIC, dead, 1091 days
416.9
TCGA-36-1568-01A
0 years, female, stage:Stage IIIC, alive, 875 days
416.7
TCGA-25-1315-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
414.6
TCGA-04-1356-01A
0 years, female, white, stage:Stage IIC, dead, 1499 days
410.7
TCGA-61-2101-01A
0 years, female, white, stage:Stage IIIC, dead, 1688 days
410.6
TCGA-24-1604-01A
0 years, female, white, stage:Stage IIIC, dead, 2688 days
408.2
TCGA-23-1022-01A
0 years, female, white, stage:Stage IIIC, dead, 1511 days
400.7
TCGA-61-1728-01A
0 years, female, white, stage:Stage IV, alive, 848 days
398.6
TCGA-24-1419-01A
0 years, female, white, stage:Stage IIIC, alive, 239 days
393.0
TCGA-24-1422-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 23 days
392.2
TCGA-24-0968-01A
0 years, female, white, stage:Stage IIIC, dead, 598 days
389.4
TCGA-61-1900-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 176 days
388.6
TCGA-25-1323-01A
0 years, female, white, stage:Stage IIIC, dead, 395 days
377.4
TCGA-24-1425-01A
0 years, female, white, stage:Stage IIIC, alive, 181 days
377.1
TCGA-13-0720-01A
0 years, female, white, stage:Stage IIIC, dead, 1355 days
375.8
TCGA-61-1737-01A
0 years, female, white, stage:Stage IV, alive, 1364 days
375.1
TCGA-23-1027-01A
0 years, female, white, stage:Stage IIIC, dead, 976 days
373.6
TCGA-29-1774-01A
0 years, female, white, stage:Stage IIIC, alive, 527 days
373.4
TCGA-31-1953-01A
0 years, female, asian, stage:Stage IIIC, alive, 204 days
373.1
TCGA-24-1104-01A
0 years, female, white, stage:Stage IV, dead, 1933 days
372.2
TCGA-24-2298-01A
0 years, female, white, stage:Stage IIIC, dead, 1620 days
372.1
TCGA-24-0982-01A
0 years, female, white, stage:Stage IIIC, dead, 679 days
371.7
TCGA-13-0727-01A
0 years, female, white, stage:Stage IIIC, dead, 462 days
368.8
TCGA-24-1427-01A
0 years, female, stage:Stage IIIC, alive, 147 days
360.1
TCGA-13-0906-01A
0 years, female, white, stage:Stage IIIC, alive, 3619 days
358.0
TCGA-13-1496-01A
0 years, female, white, stage:Stage IIIC, dead, 129 days
354.3
TCGA-24-2026-01A
0 years, female, white, stage:Stage IIIC, dead, 1059 days
353.4
TCGA-61-1919-01A
0 years, female, white, stage:Stage IIIC, dead, 1161 days
351.2
TCGA-36-1574-01A
0 years, female, asian, stage:Stage IIIC, alive, 686 days
350.2
TCGA-09-2051-01A
0 years, female, white, stage:Stage IIIC, alive, 1919 days
349.8
TCGA-29-1694-01A
0 years, female, white, stage:Stage IIIC, dead, 1187 days
347.0
TCGA-25-1627-01A
0 years, female, white, stage:Stage IIIC, dead, 394 days
343.2
TCGA-30-1862-01A
0 years, female, white, stage:Stage IV, dead, 186 days
339.4
TCGA-09-1669-01A
0 years, female, white, stage:Stage IIIA, alive, 928 days
339.3
TCGA-04-1362-01A
0 years, female, white, stage:Stage IIC, dead, 1348 days
338.3
TCGA-24-2280-01A
0 years, female, white, stage:Stage IIIC, alive, 2143 days
338.2
TCGA-24-1417-01A
0 years, female, white, stage:Stage IV, alive, 238 days
337.5
TCGA-36-1569-01A
0 years, female, white, stage:Stage IIIC, alive, 885 days
336.9
TCGA-13-0886-01A
0 years, female, white, stage:Stage IIIC, alive, 4665 days
336.1
TCGA-23-1119-01A
0 years, female, white, stage:Stage IIIC, alive, 3953 days
335.9
TCGA-24-1424-01A
0 years, female, white, stage:Stage IIIC, alive, 183 days
335.7
TCGA-24-2271-01A
0 years, female, asian, stage:Stage IIIC, dead, 962 days
330.2
TCGA-36-1577-01A
0 years, female, asian, stage:Stage IIC, alive, 783 days
329.9
TCGA-24-2254-01A
0 years, female, white, stage:Stage IIIC, dead, 1736 days
328.5
TCGA-24-1924-01A
0 years, female, white, stage:Stage IIIC, dead, 919 days
326.0
TCGA-24-1923-01A
0 years, female, white, stage:Stage IIIC, dead, 690 days
320.5
TCGA-24-0966-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 232 days
318.9
TCGA-09-2054-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 637 days
317.8
TCGA-13-1498-01A
0 years, female, white, stage:Stage IIIC, dead, 2012 days
315.1
TCGA-24-2024-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1769 days
314.8
TCGA-24-2023-01A
0 years, female, white, stage:Stage IIIA, dead, 1364 days
313.6
TCGA-20-0991-01A
0 years, female, white, stage:Stage IIB, alive, 797 days
312.9
TCGA-30-1718-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
312.0
TCGA-24-0979-01A
0 years, female, white, stage:Stage IV, dead, 1264 days
311.5
TCGA-24-2033-01A
0 years, female, white, stage:Stage IIIC, dead, 562 days
309.6
TCGA-31-1959-01A
0 years, female, white, stage:Stage IV, alive, 67 days
308.2
TCGA-13-1506-01A
0 years, female, white, stage:Stage IIIC, dead, 1039 days
304.4
TCGA-13-1507-01A
0 years, female, white, stage:Stage IIIC, dead, 1993 days
304.2
TCGA-13-0730-01A
0 years, female, white, stage:Stage IIIC, dead, 542 days
303.4
TCGA-31-1956-01A
0 years, female, white, stage:Stage IIIB, alive, 1342 days
302.9
TCGA-25-2400-01A
0 years, female, white, stage:Stage IIIC, dead, 1278 days
301.1
TCGA-24-1562-01A
0 years, female, white, stage:Stage IIIC, dead, 1384 days
298.4
TCGA-25-1313-01A
0 years, female, white, stage:Stage IV, dead, 820 days
298.3
TCGA-13-A5FT-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 2143 days
296.0
TCGA-30-1860-01A
0 years, female, white, stage:Stage IIIC, dead, 1366 days
295.7
TCGA-10-0927-01A
0 years, female, stage:Stage IIIC, dead, 2490 days
292.4
TCGA-13-1492-01A
0 years, female, white, stage:Stage IIIC, dead, 3819 days
291.6
TCGA-24-2293-01A
0 years, female, white, stage:'--, dead, 506 days
290.5
TCGA-24-1603-01A
0 years, female, white, stage:Stage IIIB, dead, 2742 days
289.3
TCGA-24-1842-01A
0 years, female, white, stage:Stage IIIC, alive, 253 days
288.5
TCGA-09-1662-01A
0 years, female, white, stage:Stage IV, dead, 2717 days
287.2
TCGA-61-2009-01A
0 years, female, white, stage:Stage IIIC, alive, 1212 days
285.1
TCGA-13-1403-01A
0 years, female, white, stage:Stage IIIC, dead, 2345 days
281.0
TCGA-29-1776-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 360 days
280.9
TCGA-04-1648-01A
0 years, female, white, stage:Stage IIIC, dead, 871 days
278.6
TCGA-VG-A8LO-01A
0 years, female, black or african american, stage:Stage IV, dead, 24 days
275.9
TCGA-61-1725-01A
0 years, female, white, stage:Stage IIIC, alive, 956 days
275.2
TCGA-57-1994-01A
0 years, female, white, stage:'--, alive, 761 days
275.2
TCGA-25-1326-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
275.2
TCGA-24-1850-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
274.7
TCGA-25-1628-01A
0 years, female, white, stage:Stage IIIC, dead, 627 days
273.2
TCGA-61-1914-01A
0 years, female, stage:Stage IIIC, alive, 1722 days
273.1
TCGA-20-1687-01A
0 years, female, white, stage:Stage IV, alive, 81 days
272.5
TCGA-25-1320-01A
0 years, female, white, stage:Stage IIIC, dead, 1155 days
271.2
TCGA-25-2399-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
267.7
TCGA-25-1318-01A
0 years, female, white, stage:Stage IIIC, dead, 1064 days
266.8
TCGA-13-1408-01A
0 years, female, white, stage:Stage IIIC, dead, 1680 days
265.3
TCGA-29-1762-01A
0 years, female, white, stage:Stage IV, dead, 2634 days
263.9
TCGA-61-1998-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
259.8
TCGA-10-0937-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
259.6
TCGA-29-2425-01A
0 years, female, white, stage:Stage IIIC, alive, 1977 days
257.5
TCGA-13-1483-01A
0 years, female, white, stage:Stage IIIC, dead, 895 days
257.0
TCGA-29-1766-01A
0 years, female, white, stage:Stage IIIC, dead, 1199 days
253.3
TCGA-59-2355-01A
0 years, female, white, stage:Stage IV, dead, 65 days
252.2
TCGA-31-1951-01A
0 years, female, white, stage:Stage IIIC, alive, 684 days
251.3
TCGA-24-1560-01A
0 years, female, white, stage:Stage IIIC, dead, 1341 days
248.4
TCGA-29-1784-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
247.6
TCGA-25-1632-01A
0 years, female, white, stage:Stage IV, dead, 1799 days
247.3
TCGA-04-1331-01A
0 years, female, white, stage:Stage IIIC, dead, 1336 days
245.5
TCGA-31-1946-01A
0 years, female, stage:Stage IIIC, alive, 918 days
244.6
TCGA-10-0931-01A
0 years, female, white, stage:Stage IIIC, dead, 1000 days
244.2
TCGA-23-2078-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
243.7
TCGA-23-1122-01A
0 years, female, white, stage:Stage IIIC, dead, 1189 days
243.3
TCGA-13-0916-01A
0 years, female, white, stage:Stage IIIC, alive, 1785 days
242.5
TCGA-61-2104-01A
0 years, female, white, stage:Stage IIC, alive, 2338 days
237.8
TCGA-13-0724-01A
0 years, female, white, stage:Stage IV, dead, 83 days
236.4
TCGA-20-1686-01A
0 years, female, white, stage:Stage IIIC, alive, 89 days
235.0
TCGA-13-0766-01A
0 years, female, white, stage:Stage IIIC, dead, 1725 days
232.2
TCGA-13-0888-01A
0 years, female, white, stage:Stage IIIC, dead, 2811 days
231.0
TCGA-61-2098-01A
0 years, female, white, stage:Stage IIIC, alive, 1993 days
230.7
TCGA-61-2088-01A
0 years, female, white, stage:Stage IIIC, alive, 145 days
228.1
TCGA-04-1542-01A
0 years, female, white, stage:Stage IIIB, dead, 2561 days
227.9
TCGA-24-1435-01A
0 years, female, white, stage:Stage IIIC, dead, 1324 days
225.1
TCGA-24-1567-01A
0 years, female, white, stage:Stage IIIB, dead, 524 days
224.6
TCGA-23-1118-01A
0 years, female, white, stage:Stage IIIC, alive, 2616 days
224.6
TCGA-31-1950-01A
0 years, female, white, stage:Stage IIIC, alive, 571 days
223.3
TCGA-24-1423-01A
0 years, female, white, stage:Stage IIIC, alive, 190 days
222.9
TCGA-61-2008-01A
0 years, female, asian, stage:Stage IIC, alive, 932 days
222.2
TCGA-OY-A56Q-01A
0 years, female, black or african american, stage:Stage IIA, alive, 576 days
222.0
TCGA-31-1944-01A
0 years, female, white, stage:Stage IIIC, alive, 1386 days
220.2
TCGA-29-1691-01A
0 years, female, white, stage:Stage IIIC, dead, 1470 days
220.0
TCGA-13-0714-01A
0 years, female, white, stage:Stage IV, dead, 189 days
219.1
TCGA-24-2036-01A
0 years, female, white, stage:Stage IIIA, dead, 1947 days
218.2
TCGA-57-1586-01A
0 years, female, white, stage:Stage IIIC, alive, 679 days
217.9
TCGA-24-1616-01A
0 years, female, white, stage:Stage IIIC, dead, 1163 days
216.8
TCGA-30-1714-01A
0 years, female, white, stage:Stage IV, dead, 1158 days
215.4
TCGA-13-0891-01A
0 years, female, white, stage:Stage IV, dead, 3128 days
213.0
TCGA-13-0885-01A
0 years, female, white, stage:Stage IIIC, alive, 3388 days
211.6
TCGA-13-0804-01A
0 years, female, white, stage:Stage IIIC, dead, 1073 days
210.6
TCGA-04-1341-01A
0 years, female, white, stage:'--, alive, 33 days
202.5
TCGA-5X-AA5U-01A
0 years, female, black or african american, stage:Stage IIC, alive, 361 days
202.3
TCGA-13-0795-01A
0 years, female, white, stage:Stage IIIC, dead, 619 days
202.1
TCGA-24-1551-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
200.8
TCGA-61-2109-01A
0 years, female, white, stage:Stage IIIC, dead, 629 days
200.6
TCGA-13-0923-01A
0 years, female, white, stage:Stage IIIC, alive, 2547 days
199.4
TCGA-25-1322-01A
0 years, female, white, stage:Stage IV, dead, 91 days
199.1
TCGA-23-1120-01A
0 years, female, white, stage:Stage IIIC, alive, 130 days
197.4
TCGA-61-1911-01A
0 years, female, white, stage:Stage IIA, alive, 1293 days
196.9
TCGA-24-1553-01A
0 years, female, white, stage:Stage IIIB, dead, 1767 days
195.1
TCGA-09-0364-01A
0 years, female, white, stage:Stage IIC, dead, 887 days
193.2
TCGA-29-2414-01A
0 years, female, white, stage:Stage IIIC, dead, 2621 days
193.1
TCGA-24-2281-01A
0 years, female, white, stage:Stage IIA, alive, 1357 days
191.7
TCGA-13-0887-01A
0 years, female, white, stage:Stage IIIC, dead, 2028 days
191.3
TCGA-29-1695-01A
0 years, female, white, stage:Stage IIIC, dead, 1229 days
190.5
TCGA-24-1105-01A
0 years, female, white, stage:Stage IIIC, dead, 1442 days
183.3
TCGA-09-2045-01A
0 years, female, asian, stage:Stage IV, dead, 1069 days
183.2
TCGA-13-1488-01A
0 years, female, white, stage:Stage IV, dead, 2154 days
182.2
TCGA-09-1670-01A
0 years, female, white, stage:Stage IIIA, alive, 547 days
181.1
TCGA-10-0928-01A
0 years, female, white, stage:Stage IIIC, dead, 563 days
180.5
TCGA-23-2077-01A
0 years, female, white, stage:Stage IIIC, alive, 3525 days
178.8
TCGA-24-1930-01A
0 years, female, white, stage:Stage IIIC, dead, 2467 days
178.6
TCGA-61-2097-01A
0 years, female, white, stage:Stage IIC, alive, 1844 days
177.5
TCGA-04-1350-01A
0 years, female, white, stage:Stage IIIC, dead, 1946 days
177.2
TCGA-24-1846-01A
0 years, female, stage:Stage IIIC, alive, 133 days
176.5
TCGA-61-1907-01A
0 years, female, white, stage:Stage IIIC, alive, 952 days
174.1
TCGA-24-1843-01A
0 years, female, white, stage:Stage IIIC, alive, 106 days
172.8
TCGA-29-1701-01A
0 years, female, white, stage:Stage IIIC, dead, 515 days
171.9
TCGA-25-1319-01A
0 years, female, white, stage:Stage IIIC, dead, 1977 days
169.2
TCGA-57-1582-01A
0 years, female, white, stage:Stage IIIC, dead, 731 days
168.6
TCGA-23-1028-01A
0 years, female, white, stage:Stage IIIC, alive, 1503 days
168.1
TCGA-24-2267-01A
0 years, female, white, stage:Stage IIB, dead, 1446 days
167.2
TCGA-04-1365-01A
0 years, female, white, stage:Stage IIIB, alive, 947 days
164.6
TCGA-29-1781-01A
0 years, female, white, stage:Stage IIIC, alive, 255 days
163.4
TCGA-25-2393-01A
0 years, female, white, stage:Stage IIIC, dead, 1157 days
163.1
TCGA-25-2392-01A
0 years, female, white, stage:Stage IV, dead, 31 days
161.5
TCGA-61-1918-01A
0 years, female, white, stage:Stage IV, dead, 479 days
153.4
TCGA-13-0920-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
153.0
TCGA-25-1321-01A
0 years, female, white, stage:Stage IIIC, dead, 1033 days
152.7
TCGA-24-1552-01A
0 years, female, white, stage:Stage IIIC, dead, 1259 days
152.3
TCGA-04-1364-01A
0 years, female, white, stage:Stage IIIC, dead, 1024 days
151.9
TCGA-09-0369-01A
0 years, female, white, stage:Stage IIIC, dead, 1082 days
150.3
TCGA-24-1416-01A
0 years, female, white, stage:Stage IV, alive, 194 days
148.7
TCGA-61-1738-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1089 days
148.4
TCGA-25-1316-01A
0 years, female, white, stage:Stage IIIC, dead, 1279 days
147.0
TCGA-59-2352-01A
0 years, female, white, stage:Stage IIIC, dead, 286 days
144.9
TCGA-36-1581-01A
0 years, female, white, stage:Stage IIC, alive, 751 days
144.7
TCGA-13-1511-01A
0 years, female, asian, stage:Stage IV, dead, 1650 days
139.8
TCGA-23-1023-01A
0 years, female, white, stage:Stage IIIC, alive, 1233 days
139.7
TCGA-29-2427-01A
0 years, female, white, stage:Stage IIIC, alive, 1900 days
139.1
TCGA-13-1404-01A
0 years, female, white, stage:Stage IIIC, alive, 2469 days
138.9
TCGA-24-2261-01A
0 years, female, white, stage:Stage IIIC, dead, 24 days
138.0
TCGA-59-2350-01A
0 years, female, stage:Stage IV, dead, 679 days
137.6
TCGA-13-1497-01A
0 years, female, white, stage:Stage IIIC, alive, 3871 days
137.2
TCGA-57-1584-01A
0 years, female, white, stage:Stage IIIC, alive, 643 days
136.6
TCGA-24-1431-01A
0 years, female, white, stage:Stage IIIC, dead, 583 days
135.4
TCGA-24-1426-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
132.9
TCGA-61-2102-01A
0 years, female, white, stage:Stage IIIC, dead, 197 days
132.7
TCGA-23-1109-01A
0 years, female, white, stage:Stage IIIC, dead, 1562 days
132.5
TCGA-29-1761-01A
0 years, female, asian, stage:Stage IIIC, dead, 528 days
131.5
TCGA-24-1845-01A
0 years, female, white, stage:Stage IIIC, alive, 116 days
130.7
TCGA-29-1697-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
129.8
TCGA-04-1361-01A
0 years, female, white, stage:Stage IIIB, alive, 989 days
128.7
TCGA-61-1995-01A
0 years, female, white, stage:Stage IIIC, alive, 61 days
124.6
TCGA-29-1688-01A
0 years, female, white, stage:Stage IIIC, dead, 2400 days
124.3
TCGA-24-1557-01A
0 years, female, white, stage:Stage IIIC, dead, 1213 days
123.7
TCGA-04-1514-01A
0 years, female, white, stage:Stage IIIA, dead, 1720 days
121.9
TCGA-24-2297-01A
0 years, female, white, stage:Stage IIIC, dead, 1699 days
121.3
TCGA-24-1428-01A
0 years, female, white, stage:Stage IIIC, alive, 529 days
118.2
TCGA-WR-A838-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 304 days
116.0
TCGA-24-1413-01A
0 years, female, white, stage:Stage IIIC, alive, 192 days
115.9
TCGA-29-1703-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1815 days
115.6
TCGA-24-1474-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 676 days
114.4
TCGA-61-2000-01A
0 years, female, white, stage:Stage IIIC, alive, 441 days
113.3
TCGA-61-2111-01A
0 years, female, white, stage:Stage IV, alive, 3825 days
112.7
TCGA-23-1107-01A
0 years, female, white, stage:Stage IV, dead, 9 days
112.6
TCGA-24-1430-01A
0 years, female, white, stage:Stage IIIC, dead, 863 days
109.8
TCGA-24-1565-01A
0 years, female, white, stage:Stage IIIC, dead, 312 days
104.0
TCGA-04-1347-01A
0 years, female, white, stage:Stage IV, alive, 1919 days
101.5
TCGA-24-2290-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
100.3
TCGA-23-1024-01A
0 years, female, white, stage:Stage IV, alive, 468 days
100.0
TCGA-57-1583-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 346 days
96.7
TCGA-24-1844-01A
0 years, female, white, stage:Stage IIIC, alive, 113 days
95.3
TCGA-59-A5PD-01A
0 years, female, black or african american, stage:Stage IC, dead, 624 days
92.9
TCGA-61-1910-01A
0 years, female, white, stage:Stage IIC, alive, 1127 days
90.3
TCGA-25-1877-01A
0 years, female, white, stage:Stage IIIC, dead, 730 days
89.8
TCGA-36-1571-01A
0 years, female, white, stage:Stage IIIB, dead, 695 days
89.7
TCGA-24-1464-01A
0 years, female, white, stage:Stage IIIC, dead, 379 days
83.0
TCGA-23-1110-01A
0 years, female, white, stage:Stage IIIC, alive, 1658 days
80.8
TCGA-59-2351-01A
0 years, female, white, stage:Stage IIIC, alive, 3532 days
78.0
TCGA-13-0800-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
76.1
TCGA-24-1469-01A
0 years, female, white, stage:Stage IIIC, alive, 277 days
75.9
TCGA-24-1471-01A
0 years, female, white, stage:Stage IIIC, alive, 36 days
74.7
TCGA-24-1558-01A
0 years, female, white, stage:Stage IIIC, dead, 594 days
74.0
TCGA-23-1123-01A
0 years, female, white, stage:Stage IIIC, dead, 1018 days
67.5
TCGA-61-1741-01A
0 years, female, white, stage:Stage IIIB, dead, 1024 days
65.9
TCGA-25-1312-01A
0 years, female, white, stage:Stage IV, dead, 31 days
57.5
TCGA-29-1778-01A
0 years, female, white, stage:Stage IIIC, alive, 454 days
57.1
TCGA-36-1570-01A
0 years, female, white, stage:Stage IIIC, alive, 655 days
56.8
TCGA-61-2092-01A
0 years, female, white, stage:Stage IIIC, alive, 1573 days
50.0
TCGA-24-1467-01A
0 years, female, white, stage:Stage IIIC, dead, 3224 days
48.8
TCGA-10-0938-01A
0 years, female, white, stage:Stage IIIC, dead, 636 days
48.6
TCGA-25-2396-01A
0 years, female, white, stage:Stage IIIC, dead, 92 days
46.6
TCGA-25-1870-01A
0 years, female, white, stage:Stage IIIC, dead, 455 days
33.9
TCGA-09-2048-01A
0 years, female, white, stage:Stage IIIC, dead, 138 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
S100A10 is not prognostic in Ovary Serous Cystadenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
233.7
Number of samples
81
Samples
Sample
Description
TPM
DO46392
0 years, female, NA, stage:III, dead, 628 days
797.6
DO46382
0 years, female, NA, stage:IV, dead, 311 days
769.3
DO46453
0 years, female, NA, stage:III, dead, 3294 days
646.7
DO46448
0 years, female, NA, stage:III, dead, 654 days
572.7
DO46388
0 years, female, NA, stage:III, dead, 413 days
569.1
DO46342
0 years, female, NA, stage:III, dead, 1398 days
537.0
DO46380
0 years, female, NA, stage:III, dead, 1423 days
524.5
DO46402
0 years, female, NA, stage:III, dead, 511 days
454.8
DO46376
0 years, female, NA, stage:III, dead, 1430 days
439.0
DO46354
0 years, female, NA, stage:III, dead, 843 days
434.3
DO46528
0 years, female, NA, stage:III, alive, 6139 days
432.7
DO46326
0 years, female, NA, stage:III, dead, 701 days
420.1
DO46348
0 years, female, NA, stage:IV, dead, 287 days
402.6
DO46368
0 years, female, NA, stage:III, dead, 2879 days
364.4
DO46398
0 years, female, NA, stage:III, alive, 437 days
355.3
DO46571
0 years, female, NA, stage:III, dead, 243 days
341.8
DO46331
0 years, female, NA, stage:III, dead, 612 days
324.4
DO46458
0 years, female, NA, stage:IV, alive, 3787 days
321.2
DO46350
0 years, female, NA, stage:III, dead, 886 days
318.4
DO46360
0 years, female, NA, stage:IV, dead, 1759 days
308.0
DO46508
0 years, female, NA, stage:III, dead, 2101 days
298.4
DO46428
0 years, female, NA, stage:IV, alive, 2644 days
280.0
DO46327
0 years, female, NA, stage:III, dead, 184 days
278.2
DO46463
0 years, female, NA, stage:III, dead, 2451 days
276.6
DO46374
0 years, female, NA, stage:III, dead, 1409 days
274.3
DO46533
0 years, female, NA, stage:III, alive, 3667 days
271.8
DO46597
0 years, female, NA, stage:III, dead, 393 days
264.4
DO46334
0 years, female, NA, stage:III, dead, 496 days
258.9
DO46333
0 years, female, NA, stage:III, dead, 359 days
253.9
DO46384
0 years, female, NA, stage:III, dead, 614 days
251.0
DO46356
0 years, female, NA, stage:III, dead, 911 days
242.0
DO46329
0 years, female, NA, stage:III, dead, 1699 days
234.5
DO46591
0 years, female, NA, stage:III, dead, 195 days
231.3
DO46330
0 years, female, NA, stage:III, dead, 684 days
230.5
DO46366
0 years, female, NA, stage:III, dead, 2054 days
227.2
DO46561
0 years, female, NA, stage:III, dead, 195 days
220.8
DO46568
0 years, female, NA, stage:III, dead, 320 days
212.7
DO46546
0 years, female, NA, stage:III, dead, 1889 days
210.4
DO46602
0 years, female, NA, stage:III, dead, 205 days
207.8
DO46340
0 years, female, NA, stage:III, dead, 616 days
201.3
DO46611
0 years, female, NA, stage:III, dead, 734 days
189.2
DO46432
0 years, female, NA, stage:III, alive, 2218 days
186.9
DO46325
0 years, female, NA, stage:III, dead, 477 days
186.7
DO46551
0 years, female, NA, stage:III, dead, 1055 days
182.7
DO46332
0 years, female, NA, stage:III, dead, 689 days
180.4
DO46390
0 years, female, NA, stage:III, dead, 374 days
178.6
DO46404
0 years, female, NA, stage:III, dead, 690 days
175.8
DO46372
0 years, female, NA, stage:III, dead, 1326 days
174.5
DO46538
0 years, female, NA, stage:III, dead, 1527 days
165.9
DO46364
0 years, female, NA, stage:III, dead, 806 days
163.1
DO46412
0 years, female, NA, stage:III, dead, 597 days
160.3
DO46443
0 years, female, NA, stage:III, dead, 2464 days
159.3
DO46386
0 years, female, NA, stage:III, dead, 1162 days
153.5
DO46438
0 years, female, NA, stage:IV, alive, 2227 days
147.4
DO46400
0 years, female, NA, stage:III, dead, 719 days
144.4
DO46560
0 years, female, NA, stage:IV, dead, 286 days
143.5
DO46338
0 years, female, NA, stage:III, dead, 596 days
137.1
DO46362
0 years, female, NA, stage:III, dead, 1639 days
130.7
DO46346
0 years, female, NA, stage:III, dead, 1187 days
129.8
DO46493
0 years, female, NA, stage:IV, alive, 839 days
116.5
DO46394
0 years, female, NA, stage:IV, dead, 1039 days
107.9
DO46606
0 years, female, NA, stage:III, alive, 804 days
107.2
DO46576
0 years, female, NA, stage:III, alive, 133 days
104.7
DO46358
0 years, female, NA, stage:III, dead, 423 days
104.2
DO46523
0 years, female, NA, stage:IV, alive, 1873 days
101.3
DO46396
0 years, female, NA, stage:III, dead, 583 days
95.7
DO46344
0 years, female, NA, stage:III, dead, 642 days
87.8
DO46378
0 years, female, NA, stage:III, alive, 843 days
86.7
DO46581
0 years, female, NA, stage:III, dead, 408 days
74.5
DO46566
0 years, female, NA, stage:III, dead, 673 days
74.1
DO46468
0 years, female, NA, stage:III, alive, 2776 days
62.1
DO46518
0 years, female, NA, stage:III, alive, 2960 days
60.6
DO46513
0 years, female, NA, stage:IV, dead, 1883 days
60.0
DO46328
0 years, female, NA, stage:III, dead, 972 days
54.5
DO46352
0 years, female, NA, stage:III, dead, 677 days
51.9
DO46336
0 years, female, NA, stage:IV, dead, 664 days
48.5
DO46408
0 years, female, NA, stage:III, dead, 489 days
48.4
DO46436
0 years, female, NA, stage:III, alive, 3193 days
41.3
DO46370
0 years, female, NA, stage:III, dead, 1727 days
35.9
DO46586
0 years, female, NA, stage:III, dead, 1019 days
30.7
DO46588
0 years, female, NA, stage:III, dead, 438 days
29.6
Show allShow less
OVARY SEROUS CYSTADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
108
Samples
Sample ID
Sample type
nRPX
3fbf076a-824b-4eac-b6dc-bf5e59_D2
Normal
1.7
1556af7e-c2ae-4fce-9aae-87c459_D1_D2
Normal
1.4
1db5574d-aca7-403c-8100-6e705f_D2
Normal
1.0
a583d3ff-8165-43e9-b764-23b7ef_D1_D2
Normal
1.0
8ed739dd-ae0f-4881-971a-db3cf4_D1_D2
Normal
0.9
5ea22f5e-307b-491d-801f-8b7fa6_D2
Tumor
0.8
a65d8e76-640f-4341-a561-afbb57_D2
Normal
0.7
3e746bea-ed68-40e6-b348-6ddf08_D2
Normal
0.6
092af714-b97a-457c-b0e9-8c20e8_D2
Normal
0.6
62f5840e-6cd7-4200-b651-645e53_D2
Tumor
0.6
31c15e30-21d4-4843-bd4a-9cd0d8_D2
Normal
0.5
bd266bdd-12e4-42cb-9c49-911bfc_D2
Tumor
0.5
6530147a-efe9-4df6-ac2f-03ece3_D2
Tumor
0.4
7edfd606-4bee-4529-9fec-1ca7f0_D2
Normal
0.4
41d0619e-b299-42e2-ac32-29e784_D2
Tumor
0.4
05387aad-2a1f-42c2-8d6f-950598_D3
Tumor
0.3
eb0a53df-7620-4024-8d2d-051142_D2
Tumor
0.3
9a7a86d3-bbf2-4d36-941d-c75c03_D1_D2
Tumor
0.3
08296da7-70ea-44df-8646-09f2cc_D2
Tumor
0.3
2115808b-6a0d-49bc-a8d7-b83bde_D2
Tumor
0.2
6319b36b-533c-4e86-8e12-80552e_D3
Tumor
0.2
e7b656bf-3c34-4ba1-bdf3-c7eefe_D2
Tumor
0.2
a8853382-b726-4ce8-98d5-ca89df_D2
Tumor
0.2
e23eb014-69c1-460a-b9d4-9786c8_D2
Normal
0.2
fe83e13f-9754-403b-8f74-d6caf8_D2
Tumor
0.2
285fed94-1495-448e-879b-b55de9_D2
Tumor
0.2
161317f3-1a39-438e-af45-cd2502_D2
Tumor
0.1
91b287fd-eadb-442d-abcd-20b741_D2
Tumor
0.1
21efd60f-6a31-4b98-9477-16a905_D2
Normal
0.1
42d860a3-8a0c-4c44-a09a-9ad8cf_D2
Tumor
0.0
50997c44-1c8b-4d34-b535-4a6cc2_D2
Tumor
0.0
9b90eb78-2f50-4aeb-b010-d642f9_D2
Tumor
0.0
35a345a4-e954-4c81-ae3f-7797cd_D2
Tumor
0.0
4ccb249a-6722-491e-97e9-e3b4e7_D2
Tumor
-0.1
8d78194e-fbef-4819-a7b5-b73ae9_D2
Tumor
-0.1
0745488e-0bfb-4d1f-8228-dedf76_D1_D2
Normal
-0.1
347e379b-77c0-4dd3-aa25-18c9d1_D2
Tumor
-0.1
994f9b8e-46cb-413f-8ec8-2c2fed_D2
Normal
-0.2
1de8d3d8-fc0e-4be0-8aa7-127c7b_D2
Tumor
-0.2
80873a0c-1f40-4d51-bab1-3f2071_D2
Tumor
-0.2
74a45e5a-a35a-4c60-a4b4-f3f5ea_D2
Tumor
-0.2
3d3e1888-d67e-4c69-ba83-112d0f_D2
Tumor
-0.2
52c064a7-78d9-4a1a-85b4-27c6d1_D2
Tumor
-0.2
49bd51fe-48a1-4828-b66e-b30c38_D2
Tumor
-0.2
927f0958-db5a-4bc5-92b7-2a3695_D2
Tumor
-0.3
46c73531-f531-4ec3-97fe-b39d9d_D2
Tumor
-0.3
2dc28da8-7ff1-4b9b-b5bd-17cc25_D2
Tumor
-0.3
685ec3c2-e67a-40d3-9eb3-aa01c9_D1_D2
Normal
-0.3
b9c1f22e-61f7-45ed-b3b4-5094c7_D2
Normal
-0.3
2b4ce90c-8036-4207-ac3e-54a76f_D2
Tumor
-0.4
7069e990-4a4e-4984-a66d-4d835a_D2
Tumor
-0.4
2ed8beb2-bc63-4bad-b5fe-1916a0_D2
Tumor
-0.4
627e6e36-3dca-4ee5-9755-6f3510_D2
Tumor
-0.4
2b73e01c-347a-4dae-a71d-752aeb_D2
Normal
-0.4
eb3f3494-7057-4afe-b212-e6e9a3_D2
Tumor
-0.4
27f3ca2d-a86f-479d-8e7e-5307c7_D2
Tumor
-0.4
2563cb02-d58a-4286-8634-7502cd_D2
Tumor
-0.4
fbb41c94-aabd-49cc-90b2-882c3e_D2
Tumor
-0.4
2f901c90-617e-46da-9fac-d68369_D2
Tumor
-0.4
1abbcb28-f221-4cd4-8c01-37b9bb_D1_D2
Normal
-0.4
1c9145ad-1981-4871-aa7e-8b11de_D2
Tumor
-0.4
ce1e5dfc-2ef1-4633-af93-5ea4d9_D2
Tumor
-0.4
1a10c200-3895-4648-b951-94f99f_D2
Tumor
-0.4
5c3971ee-87c7-4dff-b66e-f18892_D2
Tumor
-0.4
61f76fe6-a1c6-41b8-bdc2-2f9209_D2
Normal
-0.5
7c7ce2d7-6c8a-424e-8e6c-d14ad1_D2
Tumor
-0.5
15524912-685a-47ce-a824-567848_D2
Tumor
-0.5
558333b0-ea23-4303-9e3c-4932b1_D2
Tumor
-0.5
3dcf8b3c-c0c5-4dfa-9543-5d30fb_D2
Tumor
-0.5
28d0abdb-f682-4bd3-9425-a9c508_D2
Tumor
-0.5
b22659b9-e12c-4725-a7db-a833de_D1_D2
Normal
-0.5
a3a26070-fb84-406a-8280-d555e6_D2
Normal
-0.5
256ac9f5-1e19-44b4-92fb-fef3fc_D2
Tumor
-0.5
0c87932d-b6fd-4eb5-b86a-a34d07_D2
Tumor
-0.5
efc971f8-54c5-4531-a792-705ecf_D2
Tumor
-0.5
0cc794c3-5bf5-4621-b238-58a0f6_D2
Tumor
-0.6
69d552be-7cb2-4bb4-b602-a27b3e_D2
Tumor
-0.6
e6850782-fd2a-4c53-b682-1852fe_D2
Tumor
-0.6
340a3769-3031-41ae-bb08-a2f696_D2
Normal
-0.6
6e209757-a7f4-45af-b5f3-2ebc02_D2
Normal
-0.6
79b60f32-6cca-4cb6-9a1e-22a3ac_D2
Tumor
-0.6
7d953d1d-84b6-4ecd-b1d7-1ed865_D2
Tumor
-0.6
76e77c6b-c80e-4391-bdbb-e1dcea_D2
Tumor
-0.6
3490835c-c004-45ed-91f3-7c206f_D2
Tumor
-0.6
c17b0ff9-9057-4848-a0cc-abb25f_D2
Tumor
-0.7
10c2d629-0287-4511-ac25-f29031_D2
Tumor
-0.7
1772e913-f62e-446a-8cf3-720348_D2
Tumor
-0.7
8234f8ea-bdbd-45b0-bd0b-16f1e7_D2
Tumor
-0.7
f6c215ea-5381-4521-bb61-be8e97_D2
Tumor
-0.8
1b2ab076-c72f-4bbe-b9f9-657d24_D2
Tumor
-0.8
d109a3c0-350e-47f5-bda0-61899c_D2
Tumor
-0.8
e3ebe010-cd31-4b5d-8fcb-b7103b_D2
Tumor
-0.9
9c8e78bf-b03e-4ba0-9909-5ff070_D2
Tumor
-0.9
3946a96c-e0ae-442f-83b4-a9350e_D2
Tumor
-0.9
d38f40fb-dd78-43b2-8b7b-4b6977_D2
Tumor
-0.9
af95e2c6-25c4-4ab8-bf06-3e15ff_D2
Tumor
-0.9
a03d1103-b809-42c4-ad5c-5aff58_D2
Tumor
-0.9
51c1c79e-5a8e-4b0a-bf92-1c0cab_D2
Tumor
-0.9
2433b136-fc7b-4cea-b958-bc6efb_D2
Tumor
-1.0
cfd76f9a-ce60-4ec7-8e6b-a8fc31_D3
Tumor
-1.0
51a4ce2f-4166-4c6b-a7e0-942d0a_D2
Tumor
-1.0
e9d416e7-f661-400a-896e-388545_D2
Tumor
-1.0
2224c03f-b7b1-4368-887e-2b4cdf_D2
Tumor
-1.1
8e17b45e-6a06-4e4e-913d-7b1edb_D2
Tumor
-1.1
9e0d47e0-f633-468b-b82b-4d752d_D2
Tumor
-1.2
318d53c3-216b-4de1-a098-77d6dd_D2
Tumor
-1.2
3a380577-c134-47ba-a1ce-988d7c_D2
Tumor
-1.3
d4791079-c826-4fc7-9d9b-ee20ba_D2
Tumor
-1.3
Show allShow less
OVARIAN CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.