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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
S100A10 is potential prognostic, high expression is unfavorable in Cervical Squamous Cell Carcinoma and Endocervical Adenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
991.4
Number of samples
283
Samples
Sample
Description
TPM
TCGA-BI-A0VS-01A
0 years, female, white, stage:Stage IB, alive, 1735 days
6386.9
TCGA-WL-A834-01A
0 years, female, white, stage:'--, alive, 791 days
3545.1
TCGA-DS-A0VM-01A
0 years, female, white, stage:Stage IB, alive, 3589 days
3353.3
TCGA-EK-A2RN-01A
0 years, female, white, stage:Stage IB, alive, 71 days
2885.6
TCGA-C5-A0TN-01A
0 years, female, black or african american, stage:Stage IB, dead, 348 days
2660.7
TCGA-VS-A94Y-01A
0 years, female, white, stage:Stage IIB, dead, 144 days
2634.6
TCGA-C5-A7X5-01A
0 years, female, black or african american, stage:Stage IVB, dead, 414 days
2460.1
TCGA-EK-A2RJ-01A
0 years, female, white, stage:Stage IB, alive, 53 days
2424.8
TCGA-C5-A1BM-01A
0 years, female, black or african american, stage:Stage IB, dead, 2520 days
2351.7
TCGA-VS-A8EL-01A
0 years, female, black or african american, stage:Stage IIB, alive, 1992 days
2254.9
TCGA-VS-A8QF-01A
0 years, female, white, stage:Stage IIB, alive, 1800 days
2251.4
TCGA-FU-A3HY-01A
0 years, female, white, stage:Stage IB, alive, 954 days
2227.0
TCGA-Q1-A73S-01A
0 years, female, white, stage:Stage IB, alive, 688 days
2206.5
TCGA-C5-A1MN-01A
0 years, female, white, stage:Stage IIIB, dead, 1245 days
2135.1
TCGA-EK-A2PL-01A
0 years, female, white, stage:Stage IIIB, alive, 13 days
2131.6
TCGA-C5-A907-01A
0 years, female, white, stage:Stage IB, alive, 448 days
2094.7
TCGA-EK-A2GZ-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 383 days
2079.6
TCGA-C5-A7CK-01A
0 years, female, white, stage:Stage IVA, dead, 4086 days
2051.5
TCGA-EK-A2H1-01A
0 years, female, white, stage:Stage IB, alive, 799 days
2030.3
TCGA-UC-A7PG-01A
0 years, female, white, stage:Stage IIIB, dead, 370 days
2002.4
TCGA-C5-A7UC-01A
0 years, female, white, stage:Stage IB, dead, 523 days
1998.3
TCGA-EK-A2RE-01A
0 years, female, white, stage:Stage IIA, alive, 57 days
1971.6
TCGA-C5-A8YR-01A
0 years, female, white, stage:Stage IB, dead, 837 days
1969.6
TCGA-C5-A1M7-01A
0 years, female, white, stage:Stage IB, alive, 1409 days
1969.1
TCGA-MU-A8JM-01A
0 years, female, white, stage:Stage IB, alive, 607 days
1897.1
TCGA-EK-A2IP-01A
0 years, female, white, stage:Stage IB, alive, 202 days
1890.6
TCGA-C5-A2LV-01A
0 years, female, black or african american, stage:Stage IB, alive, 2234 days
1884.3
TCGA-DG-A2KL-01A
0 years, female, stage:Stage IIA, alive, 1367 days
1872.7
TCGA-VS-A953-01A
0 years, female, stage:Stage IVA, dead, 477 days
1856.1
TCGA-EK-A2RM-01A
0 years, female, white, stage:Stage IB, alive, 50 days
1854.9
TCGA-EA-A3Y4-01A
0 years, female, white, stage:Stage IB, alive, 1122 days
1816.2
TCGA-C5-A7CL-01A
0 years, female, white, stage:Stage IIIB, dead, 471 days
1789.7
TCGA-JW-A5VJ-01A
0 years, female, american indian or alaska native, stage:Stage IIB, alive, 652 days
1754.5
TCGA-EK-A2RB-01A
0 years, female, white, stage:Stage IVB, alive, 9 days
1733.5
TCGA-VS-A9UJ-01A
0 years, female, stage:Stage IIB, dead, 52 days
1720.1
TCGA-R2-A69V-01A
0 years, female, white, stage:Stage IB, alive, 596 days
1712.4
TCGA-IR-A3LB-01A
0 years, female, white, stage:Stage IB, dead, 2032 days
1705.5
TCGA-Q1-A5R3-01A
0 years, female, white, stage:'--, alive, 485 days
1693.4
TCGA-Q1-A6DV-01A
0 years, female, asian, stage:Stage IB, alive, 491 days
1681.8
TCGA-C5-A7CH-01A
0 years, female, white, stage:Stage IIB, alive, 4694 days
1677.1
TCGA-MA-AA3X-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 617 days
1676.5
TCGA-C5-A1ML-01A
0 years, female, white, stage:Stage IB, dead, 636 days
1612.8
TCGA-VS-A8QH-01A
0 years, female, white, stage:Stage IB, dead, 1210 days
1605.3
TCGA-DS-A0VN-01A
0 years, female, white, stage:Stage IB, alive, 3609 days
1587.5
TCGA-DS-A1O9-01A
0 years, female, white, stage:Stage IVA, dead, 266 days
1580.5
TCGA-C5-A8XH-01A
0 years, female, white, stage:Stage IB, dead, 1394 days
1573.8
TCGA-ZJ-A8QR-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage I, dead, 582 days
1571.5
TCGA-Q1-A6DT-01A
0 years, female, white, stage:Stage I, dead, 275 days
1568.6
TCGA-EA-A78R-01A
0 years, female, asian, stage:Stage IB, alive, 410 days
1566.9
TCGA-C5-A1MI-01A
0 years, female, white, stage:Stage IB, dead, 1083 days
1563.9
TCGA-C5-A1M9-01A
0 years, female, white, stage:Stage IB, dead, 1065 days
1532.3
TCGA-JW-A5VK-01A
0 years, female, black or african american, stage:Stage IB, alive, 623 days
1487.8
TCGA-VS-A9UY-01A
0 years, female, stage:Stage IVB, dead, 555 days
1485.4
TCGA-C5-A1BJ-01A
0 years, female, white, stage:Stage IIB, alive, 4385 days
1483.1
TCGA-VS-A8QC-01A
0 years, female, white, stage:Stage IVA, dead, 350 days
1462.9
TCGA-Q1-A5R2-01A
0 years, female, white, stage:'--, alive, 499 days
1457.6
TCGA-DS-A5RQ-01A
0 years, female, white, stage:Stage IB, alive, 512 days
1434.3
TCGA-IR-A3LK-01A
0 years, female, white, stage:Stage IB, dead, 908 days
1428.8
TCGA-EA-A410-01A
0 years, female, white, stage:Stage IIA, alive, 803 days
1424.7
TCGA-IR-A3LL-01A
0 years, female, white, stage:Stage IB, alive, 1106 days
1410.8
TCGA-C5-A905-01A
0 years, female, black or african american, stage:Stage IB, alive, 4879 days
1399.7
TCGA-DS-A1OB-01A
0 years, female, white, stage:Stage IB, dead, 861 days
1397.6
TCGA-JX-A3PZ-01A
0 years, female, white, stage:Stage IB, dead, 642 days
1396.7
TCGA-VS-A950-01A
0 years, female, stage:Stage IIIA, alive, 1221 days
1377.7
TCGA-VS-A94X-01A
0 years, female, black or african american, stage:Stage IIB, dead, 506 days
1373.9
TCGA-DS-A1OA-01A
0 years, female, asian, stage:Stage IB, dead, 879 days
1360.8
TCGA-JW-A5VG-01A
0 years, female, american indian or alaska native, stage:Stage IIA, alive, 834 days
1345.3
TCGA-C5-A8XK-01A
0 years, female, black or african american, stage:'--, alive, 3039 days
1319.0
TCGA-VS-A8Q9-01A
0 years, female, white, stage:Stage IB, alive, 1630 days
1315.0
TCGA-LP-A4AX-01A
0 years, female, asian, stage:Stage IB, alive, 380 days
1310.4
TCGA-C5-A1ME-01A
0 years, female, white, stage:Stage IB, alive, 1756 days
1309.7
TCGA-FU-A3WB-01A
0 years, female, white, stage:Stage IIA, alive, 491 days
1306.3
TCGA-EK-A3GN-01A
0 years, female, white, stage:Stage IIIB, alive, 27 days
1299.5
TCGA-EK-A2H0-01A
0 years, female, white, stage:Stage IIB, alive, 1847 days
1294.4
TCGA-Q1-A73Q-01A
0 years, female, white, stage:Stage I, alive, 284 days
1288.2
TCGA-EA-A1QT-01A
0 years, female, white, stage:Stage IB, alive, 1243 days
1287.5
TCGA-C5-A3HL-01A
0 years, female, white, stage:Stage IB, alive, 621 days
1286.1
TCGA-VS-A9UV-01A
0 years, female, stage:Stage IVA, dead, 104 days
1281.9
TCGA-DR-A0ZL-01A
0 years, female, asian, stage:Stage IB, alive, 2669 days
1259.4
TCGA-C5-A7UI-01A
0 years, female, black or african american, stage:Stage IB, dead, 2888 days
1258.4
TCGA-EK-A2RO-01A
0 years, female, american indian or alaska native, stage:Stage IIB, alive, 2 days
1246.1
TCGA-EA-A50E-01A
0 years, female, asian, stage:Stage IVA, dead, 227 days
1239.9
TCGA-4J-AA1J-01A
0 years, female, white, stage:Stage IB, alive, 542 days
1237.4
TCGA-EA-A3HT-01A
0 years, female, white, stage:Stage IB, alive, 954 days
1237.2
TCGA-C5-A2LT-01A
0 years, female, white, stage:Stage IB, alive, 2226 days
1224.2
TCGA-C5-A7UH-01A
0 years, female, white, stage:Stage IIIB, alive, 3988 days
1223.9
TCGA-VS-A9UH-01A
0 years, female, black or african american, stage:Stage IVA, alive, 1427 days
1215.1
TCGA-VS-A8Q8-01A
0 years, female, white, stage:Stage IB, dead, 978 days
1203.5
TCGA-EA-A97N-01A
0 years, female, white, stage:Stage IB, alive, 11 days
1192.6
TCGA-EA-A3HQ-01A
0 years, female, white, stage:Stage II, alive, 1136 days
1170.9
TCGA-C5-A2LY-01A
0 years, female, white, stage:Stage IB, alive, 2383 days
1168.3
TCGA-EX-A3L1-01A
0 years, female, white, stage:Stage IIA, alive, 463 days
1153.5
TCGA-DS-A7WH-01A
0 years, female, white, stage:Stage IB, alive, 533 days
1152.4
TCGA-EK-A3GJ-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IB, alive, 3 days
1141.2
TCGA-EK-A2PI-01A
0 years, female, white, stage:Stage IIIB, alive, 586 days
1140.2
TCGA-C5-A902-01A
0 years, female, black or african american, stage:Stage IB, alive, 149 days
1138.9
TCGA-DS-A1OC-01A
0 years, female, white, stage:Stage IB, alive, 376 days
1138.3
TCGA-MY-A5BF-01A
0 years, female, white, stage:Stage IIA, alive, 634 days
1125.3
TCGA-FU-A5XV-01A
0 years, female, white, stage:Stage IIIB, alive, 321 days
1108.3
TCGA-EK-A2RA-01A
0 years, female, stage:Stage IIA, alive, 1246 days
1106.1
TCGA-LP-A5U3-01A
0 years, female, asian, stage:Stage IB, alive, 25 days
1105.8
TCGA-DR-A0ZM-01A
0 years, female, white, stage:Stage IIIB, alive, 1791 days
1104.7
TCGA-C5-A1MK-01A
0 years, female, white, stage:Stage IIIB, dead, 74 days
1103.6
TCGA-Q1-A6DW-01A
0 years, female, white, stage:Stage I, alive, 534 days
1096.1
TCGA-EK-A2PG-01A
0 years, female, black or african american, stage:'--, alive, 46 days
1092.3
TCGA-EA-A5ZD-01A
0 years, female, asian, stage:Stage IB, alive, 830 days
1091.8
TCGA-EK-A2R8-01A
0 years, female, white, stage:Stage IB, alive, 44 days
1075.6
TCGA-VS-A8EB-01A
0 years, female, white, stage:Stage IIIB, dead, 305 days
1061.4
TCGA-VS-A8EG-01A
0 years, female, stage:Stage IB, alive, 1386 days
1060.2
TCGA-VS-A9UR-01A
0 years, female, white, stage:Stage IIA, alive, 793 days
1056.1
TCGA-MA-AA41-01A
0 years, female, white, stage:Stage IIB, alive, 279 days
1051.5
TCGA-FU-A3TQ-01A
0 years, female, white, stage:Stage IIIB, alive, 795 days
1044.1
TCGA-VS-A9UB-01A
0 years, female, stage:Stage IIB, alive, 911 days
1040.2
TCGA-JX-A3Q0-01A
0 years, female, black or african american, stage:Stage III, alive, 6375 days
1032.8
TCGA-C5-A7X3-01A
0 years, female, white, stage:Stage IIIB, dead, 284 days
1023.6
TCGA-DS-A3LQ-01A
0 years, female, stage:Stage IIIB, alive, 699 days
1015.9
TCGA-EA-A43B-01A
0 years, female, white, stage:Stage IB, alive, 791 days
1015.6
TCGA-EK-A2RL-01A
0 years, female, black or african american, stage:Stage IB, dead, 1453 days
1012.4
TCGA-IR-A3LI-01A
0 years, female, white, stage:Stage IVB, alive, 2493 days
1008.5
TCGA-FU-A3YQ-01A
0 years, female, white, stage:Stage IB, alive, 861 days
1008.2
TCGA-VS-A9UI-01A
0 years, female, white, stage:Stage IIB, dead, 1372 days
1007.9
TCGA-VS-AA62-01A
0 years, female, white, stage:Stage IIB, dead, 469 days
998.7
TCGA-MY-A913-01A
0 years, female, black or african american, stage:Stage IIA, alive, 524 days
992.5
TCGA-C5-A7UE-01A
0 years, female, white, stage:Stage IB, alive, 4738 days
984.3
TCGA-VS-A954-01A
0 years, female, stage:Stage IIIB, alive, 1714 days
980.0
TCGA-C5-A1MQ-01A
0 years, female, white, stage:Stage IIA, alive, 1031 days
974.2
TCGA-IR-A3LC-01A
0 years, female, white, stage:Stage IB, alive, 3935 days
972.1
TCGA-C5-A1M8-01A
0 years, female, white, stage:Stage IB, alive, 919 days
971.8
TCGA-EK-A2PM-01A
0 years, female, white, stage:Stage IIB, alive, 18 days
968.1
TCGA-EA-A5FO-01A
0 years, female, white, stage:Stage IB, alive, 815 days
955.2
TCGA-Q1-A73O-01A
0 years, female, stage:Stage IB, alive, 428 days
954.8
TCGA-MA-AA3Z-01A
0 years, female, white, stage:Stage IB, alive, 595 days
953.7
TCGA-LP-A4AU-01A
0 years, female, asian, stage:Stage IIIB, alive, 343 days
940.0
TCGA-VS-A9V0-01A
0 years, female, stage:Stage IB, alive, 573 days
922.1
TCGA-VS-A9V4-01A
0 years, female, white, stage:Stage IVA, dead, 132 days
917.1
TCGA-VS-A9UQ-01A
0 years, female, stage:Stage IB, alive, 1263 days
909.5
TCGA-LP-A4AW-01A
0 years, female, asian, stage:Stage IA, alive, 27 days
907.3
TCGA-HG-A2PA-01A
0 years, female, white, stage:Stage IB, dead, 773 days
904.5
TCGA-EX-A1H5-01A
0 years, female, black or african american, stage:Stage IIB, alive, 619 days
902.6
TCGA-C5-A8XI-01A
0 years, female, black or african american, stage:Stage IB, alive, 254 days
890.6
TCGA-VS-A9UD-01A
0 years, female, white, stage:Stage IIIA, alive, 739 days
890.1
TCGA-DS-A0VL-01A
0 years, female, white, stage:Stage IB, dead, 1692 days
889.6
TCGA-VS-A8QM-01A
0 years, female, stage:Stage IVB, dead, 951 days
886.3
TCGA-C5-A8YQ-01A
0 years, female, white, stage:Stage IB, dead, 715 days
875.9
TCGA-EA-A3HU-01A
0 years, female, white, stage:Stage II, alive, 1013 days
868.0
TCGA-EA-A5O9-01A
0 years, female, white, stage:Stage IB, alive, 788 days
859.8
TCGA-C5-A1BL-01A
0 years, female, white, stage:Stage IB, alive, 5271 days
854.2
TCGA-EA-A3HR-01A
0 years, female, white, stage:Stage II, alive, 940 days
844.4
TCGA-EK-A3GK-01A
0 years, female, white, stage:Stage IB, alive, 15 days
838.8
TCGA-ZJ-A8QQ-01A
0 years, female, white, stage:Stage IIB, alive, 2056 days
828.2
TCGA-GH-A9DA-01A
0 years, female, white, stage:Stage IB, alive, 540 days
827.8
TCGA-UC-A7PD-01A
0 years, female, american indian or alaska native, stage:Stage IB, dead, 355 days
826.7
TCGA-EK-A2RK-01A
0 years, female, white, stage:Stage IA, alive, 13 days
825.1
TCGA-ZJ-AAXA-01A
0 years, female, white, stage:Stage IB, alive, 43 days
823.3
TCGA-FU-A2QG-01A
0 years, female, white, stage:Stage IB, alive, 579 days
822.8
TCGA-ZX-AA5X-01A
0 years, female, white, stage:Stage IIIB, alive, 119 days
822.0
TCGA-MA-AA43-01A
0 years, female, white, stage:Stage IIIB, alive, 346 days
821.7
TCGA-EA-A44S-01A
0 years, female, white, stage:Stage IIIB, alive, 369 days
821.3
TCGA-C5-A7CJ-01A
0 years, female, white, stage:Stage IIA, dead, 3097 days
801.0
TCGA-C5-A1MF-01A
0 years, female, white, stage:Stage IB, alive, 1617 days
800.8
TCGA-JW-A69B-01A
0 years, female, white, stage:Stage IB, alive, 863 days
794.4
TCGA-EA-A3QD-01A
0 years, female, white, stage:Stage IIIB, alive, 397 days
792.9
TCGA-C5-A8ZZ-01A
0 years, female, white, stage:Stage IIB, alive, 636 days
779.5
TCGA-DS-A0VK-01A
0 years, female, white, stage:Stage IB, dead, 1118 days
779.3
TCGA-EK-A2RC-01A
0 years, female, stage:Stage IB, alive, 129 days
762.3
TCGA-JW-A852-01A
0 years, female, white, stage:Stage IIB, dead, 252 days
748.1
TCGA-MA-AA3Y-01A
0 years, female, white, stage:Stage IB, alive, 542 days
743.2
TCGA-EA-A3QE-01A
0 years, female, white, stage:Stage IB, alive, 761 days
739.6
TCGA-BI-A0VR-01A
0 years, female, white, stage:Stage IIIB, alive, 1505 days
738.2
TCGA-DG-A2KK-01A
0 years, female, stage:Stage IIIB, alive, 2496 days
735.3
TCGA-IR-A3LH-01A
0 years, female, black or african american, stage:Stage IIA, alive, 2394 days
731.7
TCGA-HM-A3JJ-01A
0 years, female, black or african american, stage:Stage IB, dead, 659 days
729.5
TCGA-C5-A7X8-01A
0 years, female, white, stage:Stage IB, alive, 83 days
728.6
TCGA-FU-A3EO-01A
0 years, female, white, stage:Stage IIB, alive, 490 days
727.1
TCGA-EA-A6QX-01A
0 years, female, asian, stage:Stage IIIB, alive, 730 days
726.0
TCGA-DS-A7WI-01A
0 years, female, white, stage:Stage IIA, dead, 252 days
718.3
TCGA-C5-A1MH-01A
0 years, female, white, stage:Stage IIIB, dead, 1186 days
715.3
TCGA-C5-A7CO-01A
0 years, female, white, stage:Stage IB, alive, 4482 days
713.7
TCGA-FU-A3NI-01A
0 years, female, white, stage:Stage IB, dead, 638 days
711.7
TCGA-C5-A3HF-01A
0 years, female, white, stage:Stage IB, dead, 543 days
694.1
TCGA-EA-A411-01A
0 years, female, white, stage:Stage IB, alive, 747 days
668.5
TCGA-JW-AAVH-01A
0 years, female, white, stage:Stage IB, alive, 552 days
655.6
TCGA-C5-A7XC-01A
0 years, female, white, stage:Stage IB, alive, 1551 days
651.5
TCGA-JW-A5VI-01A
0 years, female, american indian or alaska native, stage:Stage IIB, alive, 747 days
651.3
TCGA-VS-A9UM-01A
0 years, female, black or african american, stage:Stage IVB, dead, 829 days
650.6
TCGA-HM-A4S6-01A
0 years, female, white, stage:Stage IIIB, alive, 454 days
642.7
TCGA-MY-A5BD-01A
0 years, female, white, stage:Stage IIB, alive, 1667 days
630.9
TCGA-VS-A9U7-01A
0 years, female, white, stage:Stage IB, alive, 1472 days
607.3
TCGA-VS-A94Z-01A
0 years, female, white, stage:Stage IIB, alive, 1015 days
599.2
TCGA-EA-A1QS-01A
0 years, female, white, stage:Stage IB, alive, 1203 days
596.3
TCGA-VS-A8EH-01A
0 years, female, stage:Stage IIIB, alive, 986 days
585.8
TCGA-VS-A9V2-01A
0 years, female, white, stage:Stage IB, alive, 555 days
577.5
TCGA-ZJ-AAXU-01A
0 years, female, white, stage:Stage IIB, alive, 5 days
571.6
TCGA-EX-A69L-01A
0 years, female, asian, stage:Stage IB, alive, 602 days
569.5
TCGA-FU-A57G-01A
0 years, female, white, stage:Stage IB, alive, 1078 days
564.8
TCGA-VS-A9UC-01A
0 years, female, stage:Stage IIB, alive, 825 days
563.1
TCGA-EA-A3HS-01A
0 years, female, white, stage:Stage IB, alive, 959 days
553.0
TCGA-C5-A1MP-01A
0 years, female, black or african american, stage:Stage IB, alive, 109 days
548.4
TCGA-Q1-A73R-01A
0 years, female, white, stage:Stage I, alive, 567 days
540.4
TCGA-VS-A8EK-01A
0 years, female, white, stage:Stage IVA, dead, 829 days
534.6
TCGA-BI-A20A-01A
0 years, female, white, stage:Stage IB, alive, 720 days
525.5
TCGA-EA-A5ZE-01A
0 years, female, asian, stage:Stage IB, alive, 829 days
525.1
TCGA-C5-A1M6-01A
0 years, female, white, stage:Stage IIB, dead, 955 days
525.0
TCGA-EA-A4BA-01A
0 years, female, white, stage:Stage IB, alive, 755 days
524.3
TCGA-C5-A2LS-01A
0 years, female, white, stage:Stage IB, alive, 1345 days
523.8
TCGA-ZJ-AAX4-01A
0 years, female, white, stage:Stage II, alive, 21 days
523.2
TCGA-JW-A5VL-01A
0 years, female, american indian or alaska native, stage:Stage IB, alive, 474 days
523.0
TCGA-C5-A901-01A
0 years, female, white, stage:'--, alive, 518 days
520.3
TCGA-RA-A741-01A
0 years, female, white, stage:Stage IIB, alive, 444 days
517.4
TCGA-DS-A7WF-01A
0 years, female, stage:Stage IB, dead, 492 days
516.0
TCGA-MA-AA3W-01A
0 years, female, white, stage:Stage IB, alive, 685 days
514.8
TCGA-FU-A40J-01A
0 years, female, white, stage:Stage IIIB, alive, 426 days
504.4
TCGA-HM-A3JK-01A
0 years, female, white, stage:Stage IIA, alive, 632 days
497.6
TCGA-C5-A8XJ-01A
0 years, female, white, stage:Stage IB, alive, 4467 days
495.2
TCGA-XS-A8TJ-01A
0 years, female, black or african american, stage:Stage IB, alive, 890 days
491.5
TCGA-FU-A3HZ-01A
0 years, female, white, stage:Stage IIA, alive, 1103 days
489.1
TCGA-JX-A3Q8-01A
0 years, female, asian, stage:Stage IB, alive, 1357 days
484.2
TCGA-FU-A23L-01A
0 years, female, white, stage:Stage IIA, alive, 725 days
481.7
TCGA-C5-A2LZ-01A
0 years, female, white, stage:Stage IIIB, dead, 3046 days
474.3
TCGA-C5-A2LX-01A
0 years, female, white, stage:Stage IB, alive, 2526 days
470.8
TCGA-C5-A7CM-01A
0 years, female, white, stage:Stage IB, alive, 619 days
463.7
TCGA-FU-A770-01A
0 years, female, white, stage:Stage IIIB, alive, 34 days
453.0
TCGA-DG-A2KM-01A
0 years, female, stage:Stage IB, alive, 1946 days
449.8
TCGA-VS-A9UU-01A
0 years, female, stage:Stage IIB, alive, 442 days
449.7
TCGA-VS-A952-01A
0 years, female, white, stage:Stage IB, alive, 1778 days
443.6
TCGA-EA-A439-01A
0 years, female, asian, stage:Stage IIA, alive, 965 days
442.1
TCGA-DG-A2KH-01A
0 years, female, stage:Stage IB, alive, 34 days
419.7
TCGA-DS-A1OD-01A
0 years, female, white, stage:Stage IB, alive, 3874 days
418.1
TCGA-VS-A8EC-01A
0 years, female, white, stage:Stage IIIB, alive, 1415 days
417.7
TCGA-MA-AA42-01A
0 years, female, white, stage:Stage IIB, alive, 259 days
415.7
TCGA-VS-A958-01A
0 years, female, white, stage:Stage IIB, alive, 1525 days
409.8
TCGA-UC-A7PF-01A
0 years, female, stage:Stage IB, dead, 2859 days
409.4
TCGA-VS-A8EI-01A
0 years, female, white, stage:Stage IIB, alive, 729 days
407.6
TCGA-MU-A5YI-01A
0 years, female, black or african american, stage:Stage IA, alive, 1053 days
397.4
TCGA-VS-A9U6-01A
0 years, female, white, stage:Stage IVB, alive, 1320 days
385.0
TCGA-VS-A9V3-01A
0 years, female, white, stage:Stage IVB, alive, 540 days
379.4
TCGA-MU-A51Y-01A
0 years, female, white, stage:Stage IIA, alive, 854 days
371.0
TCGA-IR-A3LF-01A
0 years, female, white, stage:Stage IB, alive, 2949 days
371.0
TCGA-MY-A5BE-01A
0 years, female, black or african american, stage:Stage IB, alive, 1066 days
359.8
TCGA-C5-A7CG-01A
0 years, female, white, stage:Stage IB, alive, 6408 days
359.3
TCGA-EK-A2IR-01A
0 years, female, white, stage:Stage IB, alive, 3442 days
359.2
TCGA-Q1-A5R1-01A
0 years, female, white, stage:Stage IB, alive, 474 days
351.0
TCGA-Q1-A73P-01A
0 years, female, white, stage:Stage IB, alive, 483 days
343.8
TCGA-VS-A9U5-01A
0 years, female, white, stage:Stage IIB, alive, 1535 days
338.9
TCGA-C5-A1MJ-01A
0 years, female, white, stage:Stage IB, dead, 14 days
332.7
TCGA-PN-A8MA-01A
0 years, female, black or african american, stage:Stage IIB, alive, 90 days
330.8
TCGA-2W-A8YY-01A
0 years, female, white, stage:Stage IB, alive, 533 days
320.4
TCGA-VS-A8EJ-01A
0 years, female, white, stage:Stage IIB, dead, 607 days
316.2
TCGA-EK-A2PK-01A
0 years, female, white, stage:Stage IB, alive, 12 days
310.4
TCGA-C5-A2M2-01A
0 years, female, white, stage:Stage IB, dead, 1011 days
304.2
TCGA-VS-A9UL-01A
0 years, female, white, stage:Stage IIIB, dead, 442 days
284.4
TCGA-DG-A2KJ-01A
0 years, female, stage:Stage IIIB, alive, 2893 days
275.9
TCGA-IR-A3L7-01A
0 years, female, white, stage:Stage IB, alive, 4483 days
256.1
TCGA-C5-A3HE-01A
0 years, female, white, stage:Stage IB, alive, 548 days
249.4
TCGA-VS-A94W-01A
0 years, female, white, stage:Stage IIB, alive, 1243 days
247.3
TCGA-EA-A5ZF-01A
0 years, female, asian, stage:Stage IB, alive, 828 days
243.5
TCGA-C5-A1M5-01A
0 years, female, white, stage:Stage IB, dead, 2052 days
241.5
TCGA-VS-A9V5-01A
0 years, female, white, stage:Stage IIB, dead, 494 days
230.9
TCGA-VS-A9V1-01A
0 years, female, white, stage:Stage IVB, dead, 157 days
225.8
TCGA-VS-A957-01A
0 years, female, white, stage:Stage IB, alive, 1688 days
224.4
TCGA-JX-A5QV-01A
0 years, female, white, stage:Stage IB, alive, 636 days
215.7
TCGA-EX-A449-01A
0 years, female, white, stage:Stage IVB, alive, 447 days
213.9
TCGA-LP-A7HU-01A
0 years, female, asian, stage:Stage II, alive, 406 days
211.1
TCGA-EK-A2R9-01A
0 years, female, white, stage:Stage IB, alive, 4 days
209.1
TCGA-EX-A8YF-01A
0 years, female, white, stage:Stage IB, alive, 473 days
206.5
TCGA-VS-A8QA-01A
0 years, female, stage:Stage IB, alive, 1099 days
203.5
TCGA-EK-A2R7-01A
0 years, female, white, stage:Stage IB, alive, 27 days
202.4
TCGA-UC-A7PI-01A
0 years, female, white, stage:Stage IB, alive, 2114 days
199.4
TCGA-FU-A23K-01A
0 years, female, white, stage:Stage IIIB, alive, 372 days
196.0
TCGA-JW-A5VH-01A
0 years, female, american indian or alaska native, stage:Stage IVB, dead, 100 days
170.7
TCGA-C5-A2M1-01A
0 years, female, white, stage:Stage IB, alive, 1169 days
162.7
TCGA-VS-A9UP-01A
0 years, female, stage:Stage IIA, alive, 1444 days
161.1
TCGA-VS-A959-01A
0 years, female, stage:Stage IIB, alive, 1561 days
160.1
TCGA-IR-A3LA-01A
0 years, female, white, stage:Stage IB, alive, 4172 days
158.3
TCGA-EX-A69M-01A
0 years, female, white, stage:Stage IB, dead, 253 days
135.5
TCGA-LP-A5U2-01A
0 years, female, asian, stage:Stage IIIB, alive, 9 days
128.3
TCGA-EA-A556-01A
0 years, female, white, stage:Stage IB, alive, 453 days
124.4
TCGA-FU-A3TX-01A
0 years, female, stage:Stage IB, alive, 45 days
121.5
TCGA-HM-A6W2-01A
0 years, female, black or african american, stage:Stage IVB, alive, 287 days
106.3
TCGA-C5-A8YT-01A
0 years, female, white, stage:Stage IB, dead, 633 days
80.7
TCGA-VS-A9UT-01A
0 years, female, asian, stage:Stage IB, alive, 482 days
77.6
TCGA-VS-A9UZ-01A
0 years, female, white, stage:Stage IB, alive, 2044 days
76.8
TCGA-VS-A9UO-01A
0 years, female, white, stage:Stage IIB, alive, 1456 days
57.7
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CERVICAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.