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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
128.1
nTPM
GTEx:
128.1
nTPM
FANTOM5:
276.4
Scaled Tags Per Million
Pig:
56.6
nTPM
Mouse:
52.3
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
128.1
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 128.1
Samples: 105
Max nTPM: 223.9
Min nTPM: 27.3
Std nTPM: 37.6
Median nTPM:
316_1
62 years, male
223.9
321_1
62 years, female
221.2
163_1
78 years, male
218.8
189_1
76 years, male
213.6
115_1
83 years, male
193.4
246_1
77 years, male
186.0
177_1
74 years, male
183.9
172_1
72 years, female
183.3
265_1
87 years, male
182.2
404_1
82 years, female
181.5
9_1
66 years, female
177.9
126_1
63 years, male
177.3
396_1
62 years, male
176.2
425_1
59 years, female
174.3
352_1
62 years, male
171.4
379_1
60 years, male
170.3
377_1
82 years, female
168.5
480_1
63 years, male
164.0
468_1
89 years, male
158.9
406_1
79 years, male
156.4
384_1
83 years, male
156.1
354_1
81 years, female
156.0
319_1
81 years, male
154.7
286_1
68 years, female
150.8
243_1
75 years, male
150.2
237_1
82 years, male
149.2
526_1
61 years, male
149.1
414_1
84 years, female
148.7
375_1
74 years, female
148.5
145_1
84 years, male
147.7
229_1
69 years, female
145.5
517_1
88 years, male
144.1
137_1
83 years, male
142.7
292_1
71 years, male
142.6
324_1
76 years, male
142.3
356_1
87 years, female
142.3
394_1
75 years, female
142.1
499_1
55 years, female
140.0
349_1
83 years, male
139.7
413_1
59 years, female
139.0
153_1
70 years, female
138.8
386_1
76 years, male
138.5
335_1
73 years, female
138.1
405_1
91 years, male
137.6
376_1
75 years, female
136.9
506_1
65 years, male
136.2
320_1
89 years, female
136.0
251_1
78 years, male
133.6
217_1
76 years, male
131.7
6_1
73 years, female
130.5
503_1
68 years, male
130.4
350_1
84 years, female
128.1
291_1
76 years, male
127.5
4_1
88 years, female
127.1
389_1
86 years, female
127.1
348_1
84 years, male
125.7
313_1
79 years, female
125.5
2_1
77 years, female
125.4
452_1
88 years, female
124.0
32_1
67 years, male
123.3
142_1
61 years, female
121.7
347_1
72 years, male
117.2
218_1
71 years, female
116.7
322_1
76 years, male
114.6
415_1
77 years, female
114.4
518_1
75 years, female
113.2
42_1
85 years, male
112.4
162_1
79 years, female
110.9
318_1
68 years, male
110.9
81_1
67 years, male
109.1
355_1
70 years, female
109.0
139_1
64 years, female
107.7
447_1
81 years, male
106.2
99_1
64 years, male
104.4
254_1
77 years, female
104.3
351_1
91 years, male
103.5
314_1
67 years, male
103.4
353_1
82 years, female
103.2
264_1
73 years, female
103.0
173_1
67 years, male
102.5
18_1
88 years, male
102.2
311_1
78 years, male
100.0
17_1
71 years, male
96.7
295_1
61 years, female
95.7
288_1
66 years, female
94.0
117_1
61 years, male
93.8
490_1
67 years, female
92.9
317_1
60 years, male
92.6
149_1
88 years, male
91.7
43_1
64 years, female
88.2
120_1
70 years, female
88.2
293_1
68 years, female
87.5
266_1
85 years, male
86.8
109_1
81 years, female
86.0
466_1
57 years, female
82.8
119_1
70 years, female
81.5
315_1
62 years, female
79.1
307_1
66 years, female
77.3
501_1
88 years, male
72.1
41_1
94 years, female
71.8
89_1
63 years, male
69.9
35_1
74 years, female
65.7
491_1
89 years, female
54.0
495_1
57 years, female
47.9
308_1
70 years, female
27.3
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
